Modification Date/Time: 2006-04-06 13:01:23
Missense Discrepancy: FALSE
Comments:Homology: gb|AAG07990.1| AE004874_3 (AE004874) serine hydroxymethyltransferase [Pseudomonas aeruginosa PAO1]
Identities = 414/417 (99%), Positives = 416/417 (99%)
Sequence:
ATGTTCAGCCGTGATTTGACCCTCGCCCGCTACGATGCCGAACTCTTTGCCGCGATGGAGCAGGAAGCCCAG
CGCCAGGAAGAGCACATCGAGCTGATCGCCTCCGAGAACTACACCAGCCCGGCGGTGATGGAAGCCCAGGGT
TCGGTGCTGACCAACAAGTACGCCGAAGGTTATCCGCACAAGCGCTACTACGGCGGCTGCGAGTACGTCGAT
ATCGTCGAGCAACTGGCCATCGACCGCGCCAAGCAACTGTTCGGCGCCGATTACGCCAACGTCCAGCCGCAC
GCCGGCTCCCAGGCCAACGCCGCGGTCTACCTGGCCCTGCTGTCGGCCGGCGACACCATCCTCGGCATGAGC
CTGGCCCACGGCGGCCACCTGACCCACGGCGCCAGCGTCTCCTCCTCCGGCAAGCTGTACAACGCCGTGCAG
TACGGCATCGACGCCAATGGCCTGATCGACTACGACGAAGTCGAGCGCCTGGCCGTGGAGCACAAGCCGAAG
ATGATCGTCGCCGGCTTCTCCGCCTATTCCCAGGTCCTCGATTTCGCCCGCTTCCGCGCCATCGCCGACAAG
GTCGGCGCCTACCTGTTCGTCGACATGGCCCACGTCGCCGGCCTGGTCGCCGCTGGCGTCTACCCGAACCCG
GTGCCGTTCGCCGACGTGGTCACCACCACCACCCACAAGACCCTGCGCGGTCCGCGCGGTGGCCTGATCCTG
GCGCGCGCCAACGAGGAGATCGAGAAGAAGCTCAACTCCGCGGTATTCCCCGGCGCCCAGGGCGGTCCGCTG
GAGCACGTGATCGCGGCCAAGGCGGTGTGCTTCAAGGAAGCCCTGCAGCCGGAGTTCAAGACCTACCAGCAG
CAGGTCCTGAAGAACGCCCAGACCATGGCCCAGGTCTTCCTCGACCGCGGTTTCGACGTGGTTTCCGGCGGC
ACCCAGAACCACCTGTTCCTGCTCTCCCTGATCAAGCAGGACATCACCGGCAAAGACGCCGACGCCGCCCTC
GGCCGCGCGTTCATCACCGTGAACAAGAACTCGGTCCCGAACGACCCGCGCTCGCCGTTCGTCACCTCCGGC
CTGCGCATCGGTACCCCGGCCGTGACCACCCGCGGCTTCAAGGAAGCCGAGTGCCGCGAGCTGGCCGGCTGG
ATCTGCGACATCCTCGAGAACATGGGCGACGAGTCCGTGGTCAACGGCGTACGCGAGAAGGTCAAGGCGATC
TGCGCCAAGTTCCCGGTCTACGGCAACTAA
Translation:
MFSRDLTLARYDAELFAAMEQEAQRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYPHKRYYGGCEYVD
IVEQLAIDRAKQLFGADYANVQPHAGSQANAAVYLALLSAGDTILGMSLAHGGHLTHGASVSSSGKLYNAVQ
YGIDANGLIDYDEVERLAVEHKPKMIVAGFSAYSQVLDFARFRAIADKVGAYLFVDMAHVAGLVAAGVYPNP
VPFADVVTTTTHKTLRGPRGGLILARANEEIEKKLNSAVFPGAQGGPLEHVIAAKAVCFKEALQPEFKTYQQ
QVLKNAQTMAQVFLDRGFDVVSGGTQNHLFLLSLIKQDITGKDADAALGRAFITVNKNSVPNDPRSPFVTSG
LRIGTPAVTTRGFKEAECRELAGWICDILENMGDESVVNGVREKVKAICAKFPVYGN*
AnnotationID:1377 GeneID:1368
Modification Date/Time:
2005-05-06 07:07:29
GeneProduct: Glycine/serine hydroxymethyltransferase
Cell Localization Confidence Code: 5
Functional Category: (2) Amino acid biosynthesis and metabolism
Alternate Gene Product Name:
Functional Category Confidence Code: 5
Secondary Functional Category(ies):
Homology: >gb|AAN66296.1| AE016258_2 (AE016776) serine hydroxymethyltransferase [Pseudomonas putida
KT2440]
Length = 417
Score = 773 bits (1996), Expect = 0.0
Identities = 382/417 (91%), Positives = 403/417 (96%)
>gb|AAN81523.1| AE016764_205 (AE016764) Serine hydroxymethyltransferase [Escherichia coli
CFT073]
Length = 419
Score = 639 bits (1649), Expect = 0.0
Identities = 311/416 (74%), Positives = 361/416 (86%), Gaps = 1/416 (0%)
Structural Features: COG0112 , GlyA, Glycine/serine hydroxymethyltransferase
[Amino acid transport and metabolism]
CD-Length = 413 residues, 98.8% aligned
Score = 681 bits (1758), Expect = 0.0
Identities = 287/411 (69%), Positives = 341/411 (82%), Gaps = 4/411 (0%)
pfam00464 , SHMT, Serine hydroxymethyltransferase.
CD-Length = 397 residues, 100.0% aligned
Score = 570 bits (1471), Expect = 2e-163
Identities = 237/398 (59%), Positives = 293/398 (73%), Gaps = 21/398 (5%)
KOG2467 , Glycine/serine hydroxymethyltransferase
[Amino acid transport and metabolism]
CD-Length = 477 residues, 95.4% aligned
Score = 455 bits (1172), Expect = 9e-129
Identities = 210/456 (46%), Positives = 284/456 (62%), Gaps = 47/456 (10%)