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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG04509.1|AE004542_5 (AE004542) conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 433/435 (99%), Positives = 434/435 (99%)
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Sequence:
ATGAACCGTCGTCGTCGCTATACGGGTTCCAATCCATCGCTGCGCCGGGTGCTCTATCGCGCGCACCTGGGC
GTGGCGCTGGTCGCGGTATTCACCGCCGGGCTGGCAGTGACCCTGGTCGGCCTGCTGACCCTGCGCGCCTAC
GCGGACCCCAACCAGCAACTGATCGCCCGTTCCATCAGCTATACCGTCGAAGCCGCGGTGGTCTTCGGCGAT
GCCCAGGCCGCCGAGGAATCCCTGGCGCTGATCGCCTCCAGCGAAGAGGTCTCCAGCGCCATCGTCTACGAC
CGCCAGGGGCAGCCCCTGGCCAGCTGGCATCGGGAAAGCACCGGGCCGCTGCACCTGCTGGAACAGCAACTG
GCGCACTGGCTGCTCAGCGCGCCGACCGAACAACCGATCCTGCACGACGGCCAGAAGATCGGTTCGGTGGAG
GTGAAAGGCTCCGGCGGCAGCCTGCTGCGCTTCCTGCTCACCGGTTTCGCCGGCATGGTCCTGTGCCTGCTG
CTTACCGCCCTGGGCGCCTTCTACCTGTCACGGCGGCTGGTACGCGGTATCGTCGGCCCGCTCGACCAACTG
GCGAAGGTCGCGCATACCGTGCGCCGCGAACGGGATTTCGAGAAGCGCGTACCGGAAGCCGGCATCGCCGAG
CTGAGCCAACTGGGCGAGGACTTCAACGCCCTGCTCGACGAACTCGAATCCTGGCAGGCGCGCTTGCAGGAC
GAGAACGCCTCGCTGGCGCACCAGGCCCACCACGACAGCCTGACCAGCCTGCCCAACCGCGCCTTCTTCGAA
GGCCGCCTGAGCCGGGCGCTGCGCGATGCCAGCGAGCACCGCGAGCAATTGGCGGTACTGTTCATCGACAGC
GACCGTTTCAAGGAGATCAACGACCGCCTCGGCCATGCCGCCGGCGACACCGTGCTGGTCAACATCGCCATG
CGCATCCGTGGGCAGTTGCGCGAAAGCGACCTGGTGGCGCGCCTGGGTGGCGACGAATTCGCCGTCCTGCTC
GCACCGCTGGCGTCCGGCGCCGACGCCCTGCGCATCGCCGACAACATCATCGCCAGCATGCAGGCGCCGATC
CGGCTCAGCGACGGCAGCACGGTGAGTACCTCGCTGACCATCGGCATCGCCCTCTATCCCGAGCACGCGGAT
ACCCCGGCGGCGCTGCTCCACGACGCCGACATGGCGATGTACATCGCCAAGCGCCAGGCCCGCGGCAGCCGG
CGCCTGGCGGAACTCAACGACCCCCGCATCCTTCAGGAAGAAAAGGAGATAGACAGTGCTACCCCAGAGGCT
CCACCCAAGTAG |
Translation:
MNRRRRYTGSNPSLRRVLYRAHLGVALVAVFTAGLAVTLVGLLTLRAYADPNQQLIARSISYTVEAAVVFGD
AQAAEESLALIASSEEVSSAIVYDRQGQPLASWHRESTGPLHLLEQQLAHWLLSAPTEQPILHDGQKIGSVE
VKGSGGSLLRFLLTGFAGMVLCLLLTALGAFYLSRRLVRGIVGPLDQLAKVAHTVRRERDFEKRVPEAGIAE
LSQLGEDFNALLDELESWQARLQDENASLAHQAHHDSLTSLPNRAFFEGRLSRALRDASEHREQLAVLFIDS
DRFKEINDRLGHAAGDTVLVNIAMRIRGQLRESDLVARLGGDEFAVLLAPLASGADALRIADNIIASMQAPI
RLSDGSTVSTSLTIGIALYPEHADTPAALLHDADMAMYIAKRQARGSRRLAELNDPRILQEEKEIDSATPEA
PPK* |
AnnotationID:1333 | GeneID:1324 |
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Modification Date/Time: |
2006-02-06 01:01:49 |
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GeneProduct: | conserved hypothetical protein |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (14) Hypothetical, unclassified, unknown |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | signal transduction mechanisms |
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Homology: | >gb|AAN70243.1|AE016663_11 (AE016791) GGDEF domain protein [Pseudomonas putida KT2440]
Length = 423
Score = 469 bits (1207), Expect = e-131
Identities = 244/401 (60%), Positives = 308/401 (76%)
>emb|CAC89305.1| (AJ414142) putative exported protein [Yersinia pestis CO92]
Length = 425
Score = 421 bits (1081), Expect = e-117
Identities = 222/399 (55%), Positives = 278/399 (69%), Gaps = 1/399 (0%)
>gb|AAO70198.1| (AE016843) putative membrane protein [Salmonella enterica subsp.
enterica serovar Typhi Ty2]
Length = 406
Score = 257 bits (657), Expect = 9e-68
Identities = 152/406 (37%), Positives = 225/406 (55%), Gaps = 3/406 (0%) |
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Structural Features: | cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain
CD-Length = 155 residues, 100.0% aligned
Score = 167 bits (424), Expect = 3e-42
smart00267, DUF1, Domain of Unknown Function with GGDEF motif
CD-Length = 172 residues, 97.7% aligned
Score = 156 bits (397), Expect = 4e-39
Identities = 73/170 (42%), Positives = 97/170 (57%), Gaps = 2/170 (1%)
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