Modification Date/Time: 2006-04-06 13:01:23
Missense Discrepancy: FALSE
Comments:Homology: gb|AAG06011.1| AE004691_2 (AE004691) isocitrate dehydrogenase [Pseudomonas aeruginosa PAO1]
Identities = 418/418 (100%), Positives = 418/418 (100%)
Sequence:
ATGGGATACCAAAAGATCCAGGTGCCGGCGACCGGTGACAAAATCACTGTGAATGCCGACATGTCCTTGAGC
GTACCGAAGAACCCGATCATCCCGTTCATCGAGGGTGATGGCATCGGCGTCGATATCAGCCCGGTCATGATC
AAGGTTGTCGACGCTGCAGTGGAAAAAGCATACAAGGGCGAGCGCAAGATCGCCTGGATGGAAGTCTACGCC
GGCGAGAAGGCCACCCAGGTGTATGACCAGGACACCTGGCTGCCCCAGGAAACCCTGGACGCCGTGCGCGAC
TACGTGGTTTCCATCAAGGGTCCGCTGACCACCCCGGTCGGTGGCGGCATCCGTTCCCTGAACGTGGCCCTG
CGCCAGCAACTCGATCTCTACGTCTGCCAGCGCCCGGTACGCTGGTTCGAAGGCGTGCCCAGCCCGGTGAAG
AAGCCCGGCGACGTAGACATGGTGATCTTCCGCGAGAACTCCGAGGACATCTATGCCGGCGTCGAGTGGAAG
GCCGGTTCGCCGGAGGCGGAGAAGGTCATCAAGTTCCTCACCGAGGAAATGGGCGTCAAGAAAATCCGCTTC
ACCGAGAACTGCGGCATCGGCATCAAGCCGGTTTCCCAGGAAGGCACCAAGCGCCTGGTGCGCAAGGCCCTG
CAATACGCCGTCGACAACGACCGCAGTTCGGTGACCCTGGTGCACAAGGGCAACATCATGAAGTTCACCGAG
GGTGCCTTCAAGGATTGGGGTTACGAAGTCGCGCGCGATGAATTCGGCGCCGAGCTGCTGGACGGCGGTCCG
TGGATGCAGTTCAAGAACCCGAAGACCGGCAAGAACGTCGTGGTCAAGGACGTGATCGCCGACGCCATGTTG
CAGCAGATTCTGCTGCGCCCCGCCGAGTACGACGTGATCGCCACCCTGAACCTGAACGGCGACTATCTCTCC
GACGCCCTGGCGGCCGAGGTCGGCGGCATCGGCATCGCGCCCGGCGCCAACCTGTCCGATTCGGTGGCCATG
TTCGAGGCGACCCACGGCACCGCGCCGAAGTACGCCGGCCAGGACAAGGTCAACCCGGGTTCGCTGATCCTC
TCCGCGGAGATGATGCTGCGCCACATGGGCTGGACCGAGGCGGCCGACCTGATCATCAAGGGCACCAACGGG
GCGATCGCCGCCAAGACCGTGACCTATGACTTCGAACGCCTGATGGACGGCGCGACCCTGCTGTCCTGCTCG
GAGTTCGGCGACGCGATGATCGCCAAGATGTAG
Translation:
MGYQKIQVPATGDKITVNADMSLSVPKNPIIPFIEGDGIGVDISPVMIKVVDAAVEKAYKGERKIAWMEVYA
GEKATQVYDQDTWLPQETLDAVRDYVVSIKGPLTTPVGGGIRSLNVALRQQLDLYVCQRPVRWFEGVPSPVK
KPGDVDMVIFRENSEDIYAGVEWKAGSPEAEKVIKFLTEEMGVKKIRFTENCGIGIKPVSQEGTKRLVRKAL
QYAVDNDRSSVTLVHKGNIMKFTEGAFKDWGYEVARDEFGAELLDGGPWMQFKNPKTGKNVVVKDVIADAML
QQILLRPAEYDVIATLNLNGDYLSDALAAEVGGIGIAPGANLSDSVAMFEATHGTAPKYAGQDKVNPGSLIL
SAEMMLRHMGWTEAADLIIKGTNGAIAAKTVTYDFERLMDGATLLSCSEFGDAMIAKM*
AnnotationID:1324 GeneID:1315
Modification Date/Time:
2005-04-29 11:11:29
GeneProduct: isocitrate dehydrogenase
Cell Localization Confidence Code: 5
Functional Category: (12) Energy metabolism
Alternate Gene Product Name: isocitrate dehydrogenase, specific for NADP+
Functional Category Confidence Code: 5
Secondary Functional Category(ies): carbon compond metabolism
Homology: >gb|AAN69605.1| AE016594_2 (AE016788) isocitrate dehydrogenase, NADP-dependent,
prokaryotic-type [Pseudomonas putida KT2440]
Length = 418
Score = 761 bits (1964), Expect = 0.0
Identities = 375/418 (89%), Positives = 396/418 (94%)
>gb|AAM85370.1| AE013782_11 (AE013782) isocitrate dehydrogenase, specific for NADP+ [Yersinia
pestis KIM]
Length = 434
Score = 684 bits (1764), Expect = 0.0
Identities = 329/414 (79%), Positives = 367/414 (88%)
>dbj|BAB35031.1| (AP002555) isocitrate dehydrogenase [Escherichia coli O157:H7]
Length = 416
Score = 679 bits (1753), Expect = 0.0
Identities = 327/414 (78%), Positives = 370/414 (89%), Gaps = 1/414 (0%)
Structural Features: COG0538 , Icd, Isocitrate dehydrogenases [Energy production and conversion]
CD-Length = 407 residues, 99.3% aligned
Score = 618 bits (1595), Expect = 4e-178
Identities = 275/409 (67%), Positives = 315/409 (77%), Gaps = 7/409 (1%)
pfam00180 , Iso_dh, Isocitrate/isopropylmalate dehydrogenase.
CD-Length = 350 residues, 99.7% aligned
Score = 317 bits (814), Expect = 1e-87
Identities = 128/394 (32%), Positives = 181/394 (45%), Gaps = 55/394 (13%)