|
|
|
Modification Date/Time: | 2006-04-06 13:01:23 |
|
|
|
|
|
|
|
|
|
|
|
|
Missense Discrepancy: | FALSE |
|
Comments: Homology: gb|AAG05359.1|AE004623_9 (AE004623) branched chain amino acid transporter BraZ [Pseudomonas aeruginosa PAO1]
Identities = 437/437 (100%), Positives = 437/437 (100%)
|
Sequence:
ATGAACGCTTTGAAAGGCCGGGACATCCTGGCGCTTGGTTTTATGACCTTTGCCCTGTTCGTCGGGGCCGGC
AACATCATCTTCCCGCCCATCGTCGGCTTGCAGTCCGGCCCCCATGTGTGGCTGGCGGCGCTGGGCTTCCTG
ATCACCGCGGTGGGGCTGCCGGTGATCACCGTGATCGCCCTGGCCAAGGTCGGCGGTTCGGTCGACGCCCTC
AGCCATCCGATCGGCAGGTATGCCGGCGGCCTGCTGGCGGCGGTCTGCTACCTGGCGGTCGGCCCGCTGTTC
GCCATTCCGCGCACCGCCACGGTGTCCTTCGAGGTCGGCGTGGTGCCGCTGCTCGGCGAGAGCGGCACGGCG
CTGTTCGTCTACAGCCTGGCGTACTTCCTCCTCGCCCTGGCCATCTCCCTCTACCCCGGTCGCCTGCTGGAC
ACCGTCGGACGCTTCCTCGCCCCGCTGAAGATCCTCGCCCTGGCGATTCTCGGCGTCGCCGCCTTCCTCTGG
CCCGCCGGCCCGATCGGCACGGCCCAGCCGGAGTACACCCAGGCCGCGTTCTCCCAGGGTTTCGTCAACGGC
TACCTGACCATGGACACCCTCGCCGCGCTGGTCTTCGGCATCGTCATCGTCAACGCCATCCGTTCCCGCGGC
GTGCAGTCGCCGCGGCTGATCACCCGCTACGCCATCGTCGCCGGGCTGATCGCCGGCGTCGGCCTGGTGCTG
GTCTACGTCAGCCTGTTCCGGCTCGGCGCCGGCAGCCATGCCATCGCCGCCGACGCCAGCAACGGCGCGGCG
GTCCTGCATGCCTACGTGCAACATACCTTCGGCAGCCTCGGCAGCTCGTTCCTGGCGGGACTTATCGCGCTG
GCCTGCCTGGTCACCGCGGTCGGCCTGACCTGCGCCTGCGCCGAGTACTTCTGCCAGCGCCTGCCGCTGTCC
TACCGCAGCCTGGTGATCATCCTGGCAGGGTTCTCCTTCATCGTTTCCAACCTCGGCCTGACCAAGCTGATC
CAGGTCTCGATCCCGGTGCTCACCGCGATCTATCCGCCCTGCATCGTGCTGGTGGCGCTGAGCTTCTGCATC
GGCCTCTGGCATTCGGCGACGCGCATCCTCGCCCCGGTGATGCTGGTTTCCCTGGCGTTCGGCGTGCTCGAT
GCCCTGAAGGCGGCGGGCCTGGGCCAGGACTTCCCGCAATGGCTGCTGCACCTGCCGCTGGCCGAACAGGGC
CTGGCCTGGCTGATCCCCTCGGTCGCCACTCTCGCCGCCTGCAGCCTGGTCGACCGCCTGCTGGGCAAGCCT
GCGCAAGTCGCCGCCTGA |
Translation:
MNALKGRDILALGFMTFALFVGAGNIIFPPIVGLQSGPHVWLAALGFLITAVGLPVITVIALAKVGGSVDAL
SHPIGRYAGGLLAAVCYLAVGPLFAIPRTATVSFEVGVVPLLGESGTALFVYSLAYFLLALAISLYPGRLLD
TVGRFLAPLKILALAILGVAAFLWPAGPIGTAQPEYTQAAFSQGFVNGYLTMDTLAALVFGIVIVNAIRSRG
VQSPRLITRYAIVAGLIAGVGLVLVYVSLFRLGAGSHAIAADASNGAAVLHAYVQHTFGSLGSSFLAGLIAL
ACLVTAVGLTCACAEYFCQRLPLSYRSLVIILAGFSFIVSNLGLTKLIQVSIPVLTAIYPPCIVLVALSFCI
GLWHSATRILAPVMLVSLAFGVLDALKAAGLGQDFPQWLLHLPLAEQGLAWLIPSVATLAACSLVDRLLGKP
AQVAA* |
AnnotationID:1286 | GeneID:1277 |
|
Modification Date/Time: |
2005-03-02 15:03:07 |
|
|
|
GeneProduct: | branched-chain amino acid transport carrier |
|
|
|
Cell Localization Confidence Code: | 5 |
|
|
Functional Category: | (27) Transport of small molecules |
|
Alternate Gene Product Name: | |
|
Functional Category Confidence Code: | 5 |
|
|
Secondary Functional Category(ies): | amino acid biosynthesis and metabolims |
|
|
|
|
Homology: | >gb|AAN69765.1|AE016612_11 (AE016789) branched-chain amino acid transport system III carrier
protein [Pseudomonas putida KT2440]
Length = 437
Score = 676 bits (1743), Expect = 0.0
Identities = 340/437 (77%), Positives = 381/437 (87%)
>gb|AAM84562.1|AE013702_1 (AE013702) branched chain amino acid transport system II carrier
protein [Yersinia pestis KIM]
Length = 439
Score = 602 bits (1551), Expect = e-171
Identities = 306/425 (72%), Positives = 344/425 (80%)
>gb|AAN78989.1|AE016756_172 (AE016756) Branched-chain amino acid transport system II carrier
protein [Escherichia coli CFT073]
Length = 439
Score = 592 bits (1527), Expect = e-168
Identities = 292/434 (67%), Positives = 346/434 (79%)
|
|
Structural Features: | pfam05525, Branch_AA_trans, Branched-chain amino acid transport protein.
CD-Length = 428 residues, 100.0% aligned
Score = 441 bits (1137), Expect = 6e-125
Identities = 218/428 (50%), Positives = 294/428 (68%), Gaps = 3/428 (0%)
COG1114, BrnQ, Branched-chain amino acid permeases
[Amino acid transport and metabolism]
CD-Length = 431 residues, 99.8% aligned
Score = 443 bits (1140), Expect = 2e-125
Identities = 227/430 (52%), Positives = 301/430 (70%), Gaps = 2/430 (0%)
|
|
|
|
|
|