ViewGene

Locus Name:
GeneID:
Location:

GeneID: 1269

TrivialName: PA14_68740

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_68740

PAO1 Ortholog Locus: PA5204

Sequence Length: 1299

Protein Length: 432

Start: 6131667

Stop: 6130369

Strand: -

Type:

ChromosomeID: 2

Status: ACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAG08589.1|AE004933_5 (AE004933) N-acetylglutamate synthase [Pseudomonas aeruginosa PAO1] Identities = 432/432 (100%), Positives = 432/432 (100%)

Sequence:

ATGCCCGACTACGTCAACTGGTTACGTCACGCTTCGCCCTACATCAACTCGCACCGGGACCGCACCTTCGTG
GTCATGCTCCCCGGCGAAGGGGTGGAGCATCCCAATTTCGGCAATATCGTCCACGACCTGGTCCTTCTCCAC
AGCCTCGGCGCGCGCCTGGTGCTGGTGCACGGTTCGCGCCCGCAGATCGAGGCGCGCCTGGCCGCGCGCGGC
CTGGCTCCGCGCTATCACCGCGACCTGCGAGTGACCGATGCGCCGACCCTGGAATGCGTCATCGACGCCGTG
GGTAGTCTGCGCATCGCCATCGAGGCGCGGCTGTCGATGGACATGGCCGCCTCGCCGATGCAGGGCGCGCGC
CTGCGGGTCGCTGGCGGCAACCTGGTCACCGCGCGGCCGATCGGCGTGGTCGAGGGTGTCGACTACCACCAT
ACCGGCGAGGTCCGTCGCATCGACCGCAAGGGCATTGGCCGCCTTCTCGACGAGCGCAGCATCGTCCTGCTC
TCGCCGCTGGGCTACTCGCCGACCGGGGAAATCTTCAACCTGGCCTGCGAAGACGTGGCCATGCGCGCCGCC
ATCGACCTGGAAGCGGAAAAGCTGATTCTCTACGGCGCCGAACAGGGCCTGCTGGACGCATCCGGCAAGCTG
GTCCGCGAACTGCGCCCGCAGCAGGTGCCCGCGCACCTGCAACGGCTGGGCAACAGCTACCAGGCCGAGCTG
CTGGACGCCGCGGCGCAGGCCTGCCGGGCCGGGGTCAAGCGCAGCCATATCGTCAGCTACACCGAGGACGGC
GCGCTGCTCAGCGAGCTGTTCACCCGCACCGGCAACGGCACCCTGGTCGCCCAAGAGCAGTTCGAACAGTTG
CGCGAGGCGGGCATCGAGGACGTTGGCGGGCTGATCGAGCTGATCCGCCCGCTGGAAGAGCAGGGCATCCTG
GTACGCCGTTCCCGCGAGGTGCTGGAACGCGAGATCGAACAGTTCAGCATCGTCGAGCGCGAAGGGCTGATC
ATCGCCTGCGCCGCGCTCTACCCGATCGCCGATTCCGAGGCGGGCGAGCTGGCCTGTCTGGCGGTCAACCCG
GAGTACCGCCACGGCGGGCGTGGCGACGAACTGCTGGAGCGGATCGAGGAGCGCGCGCGCGGACTCGGCCTG
AAGACCCTGTTCGTGCTCACCACGCGGACCGCGCACTGGTTCCGCGAGCGCGGCTTCCAGCCCAGCAGCGTA
GAGCGGCTACCGGCGGCGCGGGCCTCGCTGTACAACTTCCAGCGCAATTCGCAGGTATTCGAGAAGAGCCTG
TGA

Translation:

MPDYVNWLRHASPYINSHRDRTFVVMLPGEGVEHPNFGNIVHDLVLLHSLGARLVLVHGSRPQIEARLAARG
LAPRYHRDLRVTDAPTLECVIDAVGSLRIAIEARLSMDMAASPMQGARLRVAGGNLVTARPIGVVEGVDYHH
TGEVRRIDRKGIGRLLDERSIVLLSPLGYSPTGEIFNLACEDVAMRAAIDLEAEKLILYGAEQGLLDASGKL
VRELRPQQVPAHLQRLGNSYQAELLDAAAQACRAGVKRSHIVSYTEDGALLSELFTRTGNGTLVAQEQFEQL
REAGIEDVGGLIELIRPLEEQGILVRRSREVLEREIEQFSIVEREGLIIACAALYPIADSEAGELACLAVNP
EYRHGGRGDELLERIEERARGLGLKTLFVLTTRTAHWFRERGFQPSSVERLPAARASLYNFQRNSQVFEKSL
*

AnnotationID:1278 GeneID:1269

AnnotatorUID: danlee

Modification Date/Time: 2004-02-05 17:05:07

Gene Name: argA

Confidence Code: 2

GeneProduct: N-acetylglutamate synthase

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (2) Amino acid biosynthesis and metabolism

Alternate Gene Product Name: amino-acid acetyltransferase

Functional Category Confidence Code: 5

COGs: COG0548, COG1246

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

Genomic Context:

Comment:

ReferenceID:2541

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:17031

Author/Investigator(s):

Title:

PubMed:

MedLine:

Source:

NCBI - Conserved Domain Search (BLASTP).

Reference Type: Blast (text/plain)

Data: PA5204_CDS.cgi

URL:

ReferenceID:19684

Author/Investigator(s): GenNotator

Title: CDD Search

PubMed:

MedLine:

Source:

Reference Type: RPSBLAST

Data:

URL:

Homologs By Global Alignment

Gene ID:1269

Identity:

10%

20%

30%

40%

50%

60%

70%

80%

90%

100%

HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score

2315 PA5204_tr translation of PA5204 432 99.99 99.99 0 2187.0

74737 gb|AAG08589.1|AE004933_5 (AE004933) N-acetylglutamate synthase [Pseudomonas aeruginosa PAO1] 432 99.99 99.99 0 2187.0

74740 gb|AAN70750.1|AE016719_1 (AE016793) N-acetylglutamate synthase [Pseudomonas putida KT2440] 432 85.87 92.82 0 1925.0

74739 gb|AAQ82442.1| (AY374326) ArgA [Pseudomonas syringae pv. syringae] 432 85.41 93.05 0 1925.0

74738 gb|AAO53869.1| (AE016857) N-acetylglutamate synthase [Pseudomonas syringae pv. tomato str. DC3000] 448 82.36 89.73 16 1932.0

GC ORFID: `44271`	How Found: `BLASTX`
GC_TrimmedSeqID: `69`	Blast Result ID
Subject Sequence Name: `t_PA5204`	Glimmer Score:
Start: `5395353`	Stop: `5394055`
Length: `1299`
Start Codon: `ATG`	Truncated Start:
Stop Codon: `TGA`	Truncated Stop:
Homolog: `t_PA5204 translation of PA5204`	Homolog Bit Score `847.0`
Other Homologs: `psyr_15may02_Scaffold2_revised_gene3174 (ORF: BLASTX 746.0), t_PA5204 (ORF: GLIMMER)`
GC ORF Sequence
ATGCCCGACTACGTCAACTGGTTACGTCACGCTTCGCCCTACATCAACTCGCACCGGGACCGCACCTTCGTG GTCATGCTCCCCGGCGAAGGGGTGGAGCATCCCAATTTCGGCAATATCGTCCACGACCTGGTCCTTCTCCAC AGCCTCGGCGCGCGCCTGGTGCTGGTGCACGGTTCGCGCCCGCAGATCGAGGCGCGCCTGGCCGCGCGCGGC CTGGCTCCGCGCTATCACCGCGACCTGCGAGTGACCGATGCGCCGACCCTGGAATGCGTCATCGACGCCGTG GGTAGTCTGCGCATCGCCATCGAGGCGCGGCTGTCGATGGACATGGCCGCCTCGCCGATGCAGGGCGCGCGC CTGCGGGTCGCTGGCGGCAACCTGGTCACCGCGCGGCCGATCGGCGTGGTCGAGGGTGTCGACTACCACCAT ACCGGCGAGGTCCGTCGCATCGACCGCAAGGGCATTGGCCGCCTTCTCGACGAGCGCAGCATCGTCCTGCTC TCGCCGCTGGGCTACTCGCCGACCGGGGAAATCTTCAACCTGGCCTGCGAAGACGTGGCCATGCGCGCCGCC ATCGACCTGGAAGCGGAAAAGCTGATTCTCTACGGCGCCGAACAGGGCCTGCTGGACGCATCCGGCAAGCTG GTCCGCGAACTGCGCCCGCAGCAGGTGCCCGCGCACCTGCAACGGCTGGGCAACAGCTACCAGGCCGAGCTG CTGGACGCCGCGGCGCAGGCCTGCCGGGCCGGGGTCAAGCGCAGCCATATCGTCAGCTACACCGAGGACGGC GCGCTGCTCAGCGAGCTGTTCACCCGCACCGGCAACGGCACCCTGGTCGCCCAAGAGCAGTTCGAACAGTTG CGCGAGGCGGGCATCGAGGACGTTGGCGGGCTGATCGAGCTGATCCGCCCGCTGGAAGAGCAGGGCATCCTG GTACGCCGTTCCCGCGAGGTGCTGGAACGCGAGATCGAACAGTTCAGCATCGTCGAGCGCGAAGGGCTGATC ATCGCCTGCGCCGCGCTCTACCCGATCGCCGATTCCGAGGCGGGCGAGCTGGCCTGTCTGGCGGTCAACCCG GAGTACCGCCACGGCGGGCGTGGCGACGAACTGCTGGAGCGGATCGAGGAGCGCGCGCGCGGACTCGGCCTG AAGACCCTGTTCGTGCTCACCACGCGGACCGCGCACTGGTTCCGCGAGCGCGGCTTCCAGCCCAGCAGCGTA GAGCGGCTACCGGCGGCGCGGGCCTCGCTGTACAACTTCCAGCGCAATTCGCAGGTATTCGAGAAGAGCCTG TGA