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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG03407.1|AE004441_8 (AE004441) conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 429/434 (98%), Positives = 430/434 (99%)
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Sequence:
ATGAACCCGCGTCTCGCCGCCTGCCAGGCACTGGCCGCGGTGCTCGCCGGACGCGCCTCGCTGTCTGGCGCG
TTGCCGCCGCAACTGGACAAGGTCGCCCCGCGCGATCGCGGCCTGACCCAGGAGCTGGCCTTCGGCGCGGCG
CGCTGGCAACCGCGCCTGCAGGCCCTGGCCGCGCGCCTGTTGCAGAAGCCGTTCAAGGCCGCCGACACCGAT
ATCCACGCCCTGCTGCTGATCGGCCTCTACCAGTTGCTCTACACGCGGATTCCGCCGCACGCCGCGATCGGC
GAGACCGTCGGCTGCGCCGACAAGCTGAAGAAGGGCTGGGCCAAGGGCGTGCTCAACGCCGTGCTGCGCCGC
GCGCAGCGCGAAGGCGAGACGCTGCTGGCCGAGGTCGACCGCGATCCCTCGGCGCGCCTGGGCCATCCGCGC
TGGCTGCTGAAAGCGCTCAAGCAGGCCTGGCCGGAGCAACTCGACACGCTCTGCGCGGCGAACAACGCACAC
CCGCCGATGACCTTGCGGGTCAATCGGCGCCACGGCGAGCGCGATGCCTACCTGGCCGAACTCGCCGAAGCC
GGGATCGAGGCCCGCGCCTGCGACTACAGCCGCGACGGCATCCAGCTCGCCGCGCCGCGCGACGTACGCGAA
CTACCGGGCTTCGCGGAGGGCCGCGTCAGCGTCCAGGACGAAGCCACGCAACTGGCCGCCGAGCTGCTCGAA
AGCGCGCCCGGCCAGCGTGTCCTCGACGCCTGCTGTGCGCCTGGCGGCAAGACCTGCCACCTGCTGGAAACC
CAGCCGGGACTGGCCGAAGTGGTCGCCGTCGACCTCGAGGAGAGCCGCCTGGTAAGGGTTCGGGAAAACCTC
CAGCGGCTCGGCCTGCAAGCCAGCCTGGTCGCCGCCGACGCCAGGGCCACCGGGGAGTGGTGGGACGGCAAG
CCGTTCCAGCGCATCCTCCTCGACGCGCCGTGCTCGGCCACCGGGGTGATCCGCCGCCACCCGGACATCAAG
CTGGCGCGCAAGCCGGAAGACATCGCCGCCCTGGCGCACCTGCAAGGTGAATTGCTCGACGCACTGTGGCCT
ACCCTGGAAGTCGGCGGCGTGCTGCTCTATGCCACCTGTTCGGTGATGCCGGCGGAAAACAGCGACAGCATC
GCCGCCTTCCTTGCCCGTACGCCCGGCGCCCGCGAACTGGACCTTCCCGGCCCCTGGGGCATGAAACAGCCC
CACGGCCGCCAGTTGTTGCCGCAGGTGGAAGGCCACGATGGCTTCTACTATGCCAAGCTGATCAAGATATCC
GCCCGTTGA |
Translation:
MNPRLAACQALAAVLAGRASLSGALPPQLDKVAPRDRGLTQELAFGAARWQPRLQALAARLLQKPFKAADTD
IHALLLIGLYQLLYTRIPPHAAIGETVGCADKLKKGWAKGVLNAVLRRAQREGETLLAEVDRDPSARLGHPR
WLLKALKQAWPEQLDTLCAANNAHPPMTLRVNRRHGERDAYLAELAEAGIEARACDYSRDGIQLAAPRDVRE
LPGFAEGRVSVQDEATQLAAELLESAPGQRVLDACCAPGGKTCHLLETQPGLAEVVAVDLEESRLVRVRENL
QRLGLQASLVAADARATGEWWDGKPFQRILLDAPCSATGVIRRHPDIKLARKPEDIAALAHLQGELLDALWP
TLEVGGVLLYATCSVMPAENSDSIAAFLARTPGARELDLPGPWGMKQPHGRQLLPQVEGHDGFYYAKLIKIS
AR* |
AnnotationID:1244 | GeneID:1235 |
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Modification Date/Time: |
2005-03-22 11:11:21 |
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GeneProduct: | putative tRNA and rRNA cytosine-C5-methylases |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (24) Transcription, RNA processing and degradation |
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Alternate Gene Product Name: | putative sun protein |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAO53733.1| (AE016856) sun protein [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 448
Score = 671 bits (1731), Expect = 0.0
Identities = 335/439 (76%), Positives = 371/439 (84%), Gaps = 5/439 (1%)
>gb|AAN65700.1|AE016196_11 (AE016774) sun protein [Pseudomonas putida KT2440]
Length = 436
Score = 670 bits (1728), Expect = 0.0
Identities = 335/433 (77%), Positives = 365/433 (84%)
>dbj|BAC61307.1| (AP005083) Sun protein [Vibrio parahaemolyticus]
Length = 427
Score = 407 bits (1046), Expect = e-113
Identities = 221/433 (51%), Positives = 279/433 (64%), Gaps = 6/433 (1%) |
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Structural Features: | COG0144, Sun, tRNA and rRNA cytosine-C5-methylases
[Translation, ribosomal structure and biogenesis]
CD-Length = 355 residues, 100.0% aligned
Score = 310 bits (796), Expect = 2e-85
Identities = 159/356 (44%), Positives = 204/356 (57%), Gaps = 13/356 (3%)
pfam01189, Nol1_Nop2_Sun, NOL1/NOP2/sun family.
CD-Length = 278 residues, 100.0% aligned
Score = 225 bits (575), Expect = 7e-60
Identities = 118/278 (42%), Positives = 147/278 (52%), Gaps = 9/278 (3%)
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