ViewGene
Locus Name:
GeneID:
Location:

GeneID:121
TrivialName: PA14_63800
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_63800
PAO1 Ortholog Locus:PA4825
Sequence Length:2712
Protein Length:903
Start: 5688764
Stop: 5686053
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG08210.1|AE004895_10 (AE004895) Mg(2+) transport ATPase, P-type 2 [Pseudomonas aeruginosa PAO1]
Identities = 898/903 (99%), Positives = 899/903 (99%)
Sequence:
ATGAGCGTAGCGACCCAACGCAATACCCAGCTCGACACCGAGCGCCGCAACGACCGACTGTCCATGCGCGCC
GCCCGCGAAGCGCAGAACAGCCTGGAAACCACCCTCACCAACGTCCGCGGTCGCCAGGACGGCCTCGACCAG
GCCGAGGCCGCCGCCCGGCTGCACGCCGACGGCCCCAACGAAGTGGCCCACGACCGTCCGCCACACGTCCTG
GTGCAACTGCTGCAGGCGTTCAACAACCCCTTCATCTACGTGCTGATGACGCTCTCCGCGATCAGCTTCTTC
ACCGACTTCTGGCTGCCGCTGCAGGACGGTGAGGAAACCGATCTCACTGGCGTCATCATCGTCCTCTGCATG
GTCCTGGTCAGCGGCCTGATGCGCTTCTGGCAGGAATACCGCTCGGGCAAGGCCGCCGAGGCGCTCAAGGCC
ATGGTGCGGAACACCGCCACCGTGCTGCGCCGCGACGAGCGCGGGATGCGCGGGGAGCTGCGGGAAATCCCC
ATGGGCGAACTGGTGGTCGGCGACATCGTGCGCCTGTCCGCCGGCGACATGATCCCCGCCGACATCCGCCTG
ATCGAATCGCGCGACCTGTTCATCAGCCAGGCCGTACTCACCGGCGAGGCGCTGCCGGTGGAGAAATACGAC
ACCCTCGGCGCGGTCCGCGAGAAGTCCGCCAAGCGGATCGCCGCCGACCAGCAGGACCTGCTCGAACTGCCG
AACATCTGCTTCATGGGCACCAACGTGGTCAGCGGCACGGCCACCGCAGTGGTGGTCGCCACCGGTGCGCGC
ACCTATTTCGGTTCGCTGGCCCGTTCCATCGTCGGTTCGCGGGCGCAGACCGCCTTCGACCGTGGGGTGAAC
AGCGTCAGTTGGCTGCTGATCCGCTTCATGCTGGTGATGGTGCCGATCGTGTTGCTGATCAACGGCTTCACC
AAGGGCGACTGGACCGAGGCGTTCATGTTCGCTCTCGCCGTGGCGGTCGGCCTGACCCCGGAAATGCTGCCG
ATGATCGTCAGCGCCAACCTGGCCAAGGGCGCGGTGGCGATGTCGCGGCGCAAGGTGGTGGTCAAGCGTCTT
AACGCGATCCAGAACTTCGGCGCCATGGACGTGCTCTGCACCGACAAGACCGGCACCCTGACCCAGGACCGG
ATCATCCTCGAGCATCACGTCGACGTTGCCGGCCGGCGCTGCGACCGGGTCCTGCAAATGGCCTGGCTGAAC
AGCTTCCACCAGTCCGGGATGAAGAACCTGATGGACCGCGCGGTGGTCGCCTTCGTCGAACAGAACCCGCGC
ATCACGCCGCCGGATGCCTGGCACAAGGTCGACGAACTGCCCTTCGATTTCGTCCGTCGGCGTCTCTCGGTG
ATCCTCGAGGGCAAGGGCGGCGAACACCTGCTGGTGTGCAAGGGCGCGGTCGAGGAAATGCTCGAGATCGCC
ACCCGCGTGCACCAGGACGGCGTCGACCTGCCGCTCGACGAGGAACGCCGCCGGGCCCTGCTGGCGCTGGCC
GAGCAATACAACCGCGACGGCTTCCGCGTGCTCCTGCTCGGCACCCGCAGCCTCTCGCGCACGGAGTCCCAG
GCCCAGTACGGCGCCAGCGACGAGCGCGACCTGGTGATCGCCGGCCTGCTGACCTTCCTCGATCCGCCGAAG
GAAACCGCCGGCCCGGCCATCGCCGCGTTGCGCGAGAACGGCGTGGCGGTGAAGGTGCTCACCGGCGACAAC
CCGGTGGTCAGCGCGAAGATCTGCCGCGAGGTCGGCCTGGACGTCGGCGAGCCGCTGCTCGGTCGCGACATC
GACCTGATGGACGATGCCACCCTGCAACGCCTGGCCGAGGAGCGCACGGTGTTCGCCAAGCTGACGCCGCTG
CAGAAGTCGCGGGTGCTCAAGGCCCTGCAGGGCAACGGACACACCGTCGGCTTCCTCGGCGACGGCATCAAC
GACGCCCCGGCGCTGCGAGATGCCGATGTCGGCATCTCGGTGGACAGCGGCACCGACATCGCCAAGGAATCG
GCCGACATCATCCTCCTGGAAAAAAGCCTGATGGTCCTGGAGGAGGGCGTGATCAAGGGCCGCGAGACCTTC
GGCAACATCATGAAGTACCTGAACATGACTGCCAGCTCCAACTTCGGCAACGTGTTCTCGGTACTGGTGGCC
AGCGCCTTCATCCCCTTCCTGCCGATGCTGGCGATCCACCTGCTGCTGCAGAACCTGATGTACGACATCTCC
CAGCTGTCGCTGCCGTGGGACAAGATGGACAAGGAGTTCCTCGCCAAGCCGCGCAAGTGGGACTCGAAGAAC
ATCGGCCGCTTCATGGTCTGGATCGGCCCGACCTCGTCGATCTTCGACATCACCACCTACGCGCTGATGTGG
TTCGTGTTCGCCGCCAACAGCCCGGAAATGCAGTCGCTGTTCCAGTCCGGCTGGTTCATCGAGGGCCTGCTC
TCGCAGACCCTGGTGGTGCACATGCTGCGTACCCAGAAGATTCCCTTCATCCAGAGCACCGCGGCGCTGCCG
GTGATGCTGATGACCGGGCTGGTGATGGCGCTGGGCATCTACGTGCCGTTCTCGCCGCTGGGGGCGATGGTC
GGCCTGCAGCCGCTGCCGTGGGAGTACTTCCCTTGGCTGGTGGGCACGCTGCTCTGCTACTGCGTCACCGCG
CAGACCATGAAGACCCTCTACATCCGCCGCTTCGGCCAGTGGTTCTGA
Translation:
MSVATQRNTQLDTERRNDRLSMRAAREAQNSLETTLTNVRGRQDGLDQAEAAARLHADGPNEVAHDRPPHVL
VQLLQAFNNPFIYVLMTLSAISFFTDFWLPLQDGEETDLTGVIIVLCMVLVSGLMRFWQEYRSGKAAEALKA
MVRNTATVLRRDERGMRGELREIPMGELVVGDIVRLSAGDMIPADIRLIESRDLFISQAVLTGEALPVEKYD
TLGAVREKSAKRIAADQQDLLELPNICFMGTNVVSGTATAVVVATGARTYFGSLARSIVGSRAQTAFDRGVN
SVSWLLIRFMLVMVPIVLLINGFTKGDWTEAFMFALAVAVGLTPEMLPMIVSANLAKGAVAMSRRKVVVKRL
NAIQNFGAMDVLCTDKTGTLTQDRIILEHHVDVAGRRCDRVLQMAWLNSFHQSGMKNLMDRAVVAFVEQNPR
ITPPDAWHKVDELPFDFVRRRLSVILEGKGGEHLLVCKGAVEEMLEIATRVHQDGVDLPLDEERRRALLALA
EQYNRDGFRVLLLGTRSLSRTESQAQYGASDERDLVIAGLLTFLDPPKETAGPAIAALRENGVAVKVLTGDN
PVVSAKICREVGLDVGEPLLGRDIDLMDDATLQRLAEERTVFAKLTPLQKSRVLKALQGNGHTVGFLGDGIN
DAPALRDADVGISVDSGTDIAKESADIILLEKSLMVLEEGVIKGRETFGNIMKYLNMTASSNFGNVFSVLVA
SAFIPFLPMLAIHLLLQNLMYDISQLSLPWDKMDKEFLAKPRKWDSKNIGRFMVWIGPTSSIFDITTYALMW
FVFAANSPEMQSLFQSGWFIEGLLSQTLVVHMLRTQKIPFIQSTAALPVMLMTGLVMALGIYVPFSPLGAMV
GLQPLPWEYFPWLVGTLLCYCVTAQTMKTLYIRRFGQWF*
AnnotationID:131GeneID:121
AnnotatorUID: diggins
Modification Date/Time: 2005-04-25 20:08:10
Gene Name:mgtA
Confidence Code:2
GeneProduct:Mg(2+) transport ATPase, P-type 2
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(27) Transport of small molecules
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:COG0474
Secondary Functional Category(ies):inorganic ion transport and metabolism
EC Number:3.6.3.2
Status:ACTIVE
Pathway:






 
Homology:
>gb|AAN68253.1|AE016459_7 (AE016784) magnesium-translocating P-type ATPase [Pseudomonas
           putida KT2440]
          Length = 920

 Score = 1343 bits (3476), Expect = 0.0
 Identities = 686/899 (76%), Positives = 768/899 (85%), Gaps = 2/899 (0%)

>gb|AAN33249.1|AE014508_4 (AE014508) magnesium ion-transporting ATPase, E1-E2 family
           [Brucella suis 1330]
          Length = 905

 Score = 1336 bits (3457), Expect = 0.0
 Identities = 676/905 (74%), Positives = 763/905 (84%), Gaps = 2/905 (0%)

>gb|AAL53297.1| (AE009644) MG(2+) TRANSPORT ATPASE, P-TYPE [Brucella melitensis
           16M]
          Length = 928

 Score = 1334 bits (3453), Expect = 0.0
 Identities = 676/905 (74%), Positives = 763/905 (84%), Gaps = 2/905 (0%)








 
Structural Features:
COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism]
CD-Length = 917 residues,  99.8% aligned
Score =  719 bits (1856), Expect = 0.0
Identities = 310/942 (32%), Positives = 473/942 (50%), Gaps = 75/942 (7%)






   
Genomic Context:






   
Comment:


















    ReferenceID:245




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:17387




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:

















    ReferenceID:35222




  
Author/Investigator(s):
        





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:Misc (text/plain)







    
Data:121_cdd.html


    		




 
URL:

















    ReferenceID:35984




  
Author/Investigator(s):
        Tao T, Snavely MD, Farr SG, Maguire ME.





  
Title:
        Magnesium transport in Salmonella typhimurium: mgtA encodes a P-type ATPase and is regulated by Mg2+ in a manner similar to that of the mgtB P-type ATPase.




  
PubMed:
        7751273


MedLine:
        




    
Source:
J Bacteriol. 1995 May;177(10):2654-62.






    
Reference Type:Journal 







    
Data:


    		




 
URL:http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pubmed&pubmedid=7751273

















    ReferenceID:35985




  
Author/Investigator(s):
        Minagawa S, Ogasawara H, Kato A, Yamamoto K, Eguchi Y, Oshima T, Mori H, Ishihama A, Utsumi R.





  
Title:
        Identification and molecular characterization of the Mg2+ stimulon of Escherichia coli.




  
PubMed:
        12813061


MedLine:
        




    
Source:
J Bacteriol. 2003 Jul;185(13):3696-702.






    
Reference Type:Journal 







    
Data:


    		




 
URL:http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pubmed&pubmedid=12813061









           
Homologs By Global Alignment 

           

       



     
Gene ID:121
           
Identity:

                               
                                   0%
                               
                                   10%
                               
                                   20%
                               
                                   30%
                               
                                   40%
                               
                                   50%
                               
                                   60%
                               
                                   70%
                               
                                   80%
                               
                                   90%
                               
                                   100%
                               
                             

                           

     
HomologID
                           Accession
                           Description
                           Length
                           PctIdentity
                           PctSimilarity
                           Gaps
                           Score
     

     
     
230
                           PA4825_tr
                           translation of PA4825
                           903
                           99.44
                           99.55
                           0
                           4552.0
     

     
     
16879
                           gb|AAG08210.1|AE004895_10
                           (AE004895) Mg(2+) transport ATPase, P-type 2 [Pseudomonas aeruginosa PAO1]
                           903
                           99.44
                           99.55
                           0
                           4552.0
     

     
     
16880
                           gb|AAN68253.1|AE016459_7
                           (AE016784) magnesium-translocating P-type ATPase [Pseudomonas putida KT2440]
                           921
                           74.70
                           83.71
                           19
                           3476.0
     

     
     
16881
                           gb|AAN33249.1|AE014508_4
                           (AE014508) magnesium ion-transporting ATPase, E1-E2 family [Brucella suis 1330]
                           907
                           74.64
                           84.01
                           6
                           3460.0
     

     
     
16884
                           emb|CAC90483.1|
                           (AJ414149) Mg(2+) transport ATPase protein B [Yersinia pestis CO92]
                           903
                           73.97
                           83.49
                           4
                           3432.0
     

     






      

          
GC ORFID: 43123How Found: BLASTX

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: t_PA4825Glimmer Score: 

          
Start: 4952444Stop: 4949733

          
Length: 2712


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: t_PA4825 translation of PA4825Homolog Bit Score 1758.0

          
Other Homologs:  t_PA4825 (ORF: GLIMMER)

          
GC ORF Sequence

           
ATGAGCGTAGCGACCCAACGCAATACCCAGCTCGACACCGAGCGCCGCAACGACCGACTGTCCATGCGCGCC 
GCCCGCGAAGCGCAGAACAGCCTGGAAACCACCCTCACCAACGTCCGCGGTCGCCAGGACGGCCTCGACCAG 
GCCGAGGCCGCCGCCCGGCTGCACGCCGACGGCCCCAACGAAGTGGCCCACGACCGTCCGCCACACGTCCTG 
GTGCAACTGCTGCAGGCGTTCAACAACCCCTTCATCTACGTGCTGATGACGCTCTCCGCGATCAGCTTCTTC 
ACCGACTTCTGGCTGCCGCTGCAGGACGGTGAGGAAACCGATCTCACTGGCGTCATCATCGTCCTCTGCATG 
GTCCTGGTCAGCGGCCTGATGCGCTTCTGGCAGGAATACCGCTCGGGCAAGGCCGCCGAGGCGCTCAAGGCC 
ATGGTGCGGAACACCGCCACCGTGCTGCGCCGCGACGAGCGCGGGATGCGCGGGGAGCTGCGGGAAATCCCC 
ATGGGCGAACTGGTGGTCGGCGACATCGTGCGCCTGTCCGCCGGCGACATGATCCCCGCCGACATCCGCCTG 
ATCGAATCGCGCGACCTGTTCATCAGCCAGGCCGTACTCACCGGCGAGGCGCTGCCGGTGGAGAAATACGAC 
ACCCTCGGCGCGGTCCGCGAGAAGTCCGCCAAGCGGATCGCCGCCGACCAGCAGGACCTGCTCGAACTGCCG 
AACATCTGCTTCATGGGCACCAACGTGGTCAGCGGCACGGCCACCGCAGTGGTGGTCGCCACCGGTGCGCGC 
ACCTATTTCGGTTCGCTGGCCCGTTCCATCGTCGGTTCGCGGGCGCAGACCGCCTTCGACCGTGGGGTGAAC 
AGCGTCAGTTGGCTGCTGATCCGCTTCATGCTGGTGATGGTGCCGATCGTGTTGCTGATCAACGGCTTCACC 
AAGGGCGACTGGACCGAGGCGTTCATGTTCGCTCTCGCCGTGGCGGTCGGCCTGACCCCGGAAATGCTGCCG 
ATGATCGTCAGCGCCAACCTGGCCAAGGGCGCGGTGGCGATGTCGCGGCGCAAGGTGGTGGTCAAGCGTCTT 
AACGCGATCCAGAACTTCGGCGCCATGGACGTGCTCTGCACCGACAAGACCGGCACCCTGACCCAGGACCGG 
ATCATCCTCGAGCATCACGTCGACGTTGCCGGCCGGCGCTGCGACCGGGTCCTGCAAATGGCCTGGCTGAAC 
AGCTTCCACCAGTCCGGGATGAAGAACCTGATGGACCGCGCGGTGGTCGCCTTCGTCGAACAGAACCCGCGC 
ATCACGCCGCCGGATGCCTGGCACAAGGTCGACGAACTGCCCTTCGATTTCGTCCGTCGGCGTCTCTCGGTG 
ATCCTCGAGGGCAAGGGCGGCGAACACCTGCTGGTGTGCAAGGGCGCGGTCGAGGAAATGCTCGAGATCGCC 
ACCCGCGTGCACCAGGACGGCGTCGACCTGCCGCTCGACGAGGAACGCCGCCGGGCCCTGCTGGCGCTGGCC 
GAGCAATACAACCGCGACGGCTTCCGCGTGCTCCTGCTCGGCACCCGCAGCCTCTCGCGCACGGAGTCCCAG 
GCCCAGTACGGCGCCAGCGACGAGCGCGACCTGGTGATCGCCGGCCTGCTGACCTTCCTCGATCCGCCGAAG 
GAAACCGCCGGCCCGGCCATCGCCGCGTTGCGCGAGAACGGCGTGGCGGTGAAGGTGCTCACCGGCGACAAC 
CCGGTGGTCAGCGCGAAGATCTGCCGCGAGGTCGGCCTGGACGTCGGCGAGCCGCTGCTCGGTCGCGACATC 
GACCTGATGGACGATGCCACCCTGCAACGCCTGGCCGAGGAGCGCACGGTGTTCGCCAAGCTGACGCCGCTG 
CAGAAGTCGCGGGTGCTCAAGGCCCTGCAGGGCAACGGACACACCGTCGGCTTCCTCGGCGACGGCATCAAC 
GACGCCCCGGCGCTGCGAGATGCCGATGTCGGCATCTCGGTGGACAGCGGCACCGACATCGCCAAGGAATCG 
GCCGACATCATCCTCCTGGAAAAAAGCCTGATGGTCCTGGAGGAGGGCGTGATCAAGGGCCGCGAGACCTTC 
GGCAACATCATGAAGTACCTGAACATGACTGCCAGCTCCAACTTCGGCAACGTGTTCTCGGTACTGGTGGCC 
AGCGCCTTCATCCCCTTCCTGCCGATGCTGGCGATCCACCTGCTGCTGCAGAACCTGATGTACGACATCTCC 
CAGCTGTCGCTGCCGTGGGACAAGATGGACAAGGAGTTCCTCGCCAAGCCGCGCAAGTGGGACTCGAAGAAC 
ATCGGCCGCTTCATGGTCTGGATCGGCCCGACCTCGTCGATCTTCGACATCACCACCTACGCGCTGATGTGG 
TTCGTGTTCGCCGCCAACAGCCCGGAAATGCAGTCGCTGTTCCAGTCCGGCTGGTTCATCGAGGGCCTGCTC 
TCGCAGACCCTGGTGGTGCACATGCTGCGTACCCAGAAGATTCCCTTCATCCAGAGCACCGCGGCGCTGCCG 
GTGATGCTGATGACCGGGCTGGTGATGGCGCTGGGCATCTACGTGCCGTTCTCGCCGCTGGGGGCGATGGTC 
GGCCTGCAGCCGCTGCCGTGGGAGTACTTCCCTTGGCTGGTGGGCACGCTGCTCTGCTACTGCGTCACCGCG 
CAGACCATGAAGACCCTCTACATCCGCCGCTTCGGCCAGTGGTTCTGA