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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG08421.1|AE004916_10 (AE004916) glutamate synthase large chain precursor [Pseudomonas aeruginosa PAO1]
Identities = 1479/1481 (99%), Positives = 1480/1481 (99%)
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Sequence:
ATGAAAGCAGGTCTGTACCATCCTGAAACGTTCAAGGATAACTGCGGATTTGGCCTGATCGCCCATATGCAG
GGCGAGCCGAGCCATCAACTTCTGCAAACCGCAATCGAAGCACTGACCTGCATGACCCACCGCGGTGGGATC
AATGCCGATGGCAAGACCGGGGACGGCTGCGGGCTGCTGATCCAGAAGCCCGACCTGTTCCTGCGTGCCGTC
GCCAGGGAAGCCTTTTCTGTCGACCTGCCCGAGCAATACGCGGTGGGCATGGTGTTCTTCAACCAGGACCCG
GTGAAAGCCGAGGCGGCACGCGAGAACATGAATCGCGAGATCGTCGCCGCCGGACTGGAGCTGGTCGGCTGG
CGCAAGGTGCCGATCGATACCAGCGTTCTCGGCCGCCTGGCGCTGGAGCGCCTGCCGCAGATCGAACAGGTG
TTCATCGGCGGCGCCGGCCTGAGCGACCAGGACTTCGCCATCAAGCTGTTCAGCGCACGGCGCCGCTCGTCG
GTGGCCAACGCCGCCGACAGCGACCACTACATCTGCAGCTTTTCGCACAAGACCATCATCTATAAGGGCCTG
ATGATGCCGGCCGACCTGGCCGCCTTCTATCCGGACCTTGGCGACGAGCGCCTGCAGACCGCGATCTGCGTA
TTCCACCAGCGCTTCTCCACCAACACCCTGCCGAAATGGCCCCTGGCGCAGCCTTTCCGCTTCCTCGCCCAC
AACGGCGAGATCAACACCATCACCGGCAACCGCAACTGGGCCCAGGCGCGGCGGACCAAGTTCACCAACGAA
CTGATCCCCGACCTGGAAGAGCTAGGCCCGCTGGTGAACCGCGTCGGCTCCGACTCGTCGAGCATGGACAAC
ATGCTCGAACTGATGGTCACCGGCGGCATGGACCTGTTCCGCGGCCTGCGCATGATCATCCCGCCGGCCTGG
CAGAACGTCGAGACCATGGACGCCGACCTGCGCGCGTTCTACGAGTATAACTCGCTGCACATGGAGCCCTGG
GATGGCCCCGCCGGCGTCGTGCTGACCGACGGTCGCTATGCCGTCTGCCTGCTCGACCGCAATGGCCTGCGC
CCGTCGCGCTGGGTCACCACGAAGAACGGCTACATCACCCTGGCCTCGGAGATCGGCGTCTGGGACTACAAG
CCCGAGGACGTCATCGCCAAGGGTCGCGTCGGTCCGGGGCAGATCCTCGCGGTGGACACCGAGACCGGCCAG
GTCCTGCACAGCGACGACATCGACAACCGCCTGAAGTCGCGCCATCCCTACAAGCAATGGCTGCGGCAGAAT
GCCCTGCGCATCCAGGCGACCCTGGACGACGACCATGGCGTGGCCAGCTACGACGCCGACCAGCTCAAGCAA
TTCATGAAGATGTTCCAGGTCACCTTCGAGGAGCGTGACCAGGTGCTGCGTCCGCTCGGCGAGCAGGGCCAG
GAAGCGGTGGGCTCCATGGGCGACGATACGCCGATGGCGATCCTCTCCCGGCGCATCCGCTCTCCGTACGAT
TACTTCCGCCAGCAATTCGCCCAGGTCACCAACCCGCCGATCGACCCGCTGCGCGAAGCCATCGTGATGTCC
CTGGAAACCTGCCTGGGCGTCGAGCAGAACATCTTCGAGGAAGCCCCGCACCATGCCAACCAGGCGATCCTC
ACCACTCCGGTGATCTCGCCGGCGAAGTGGCGGACCATCATGACCCTGGACCGCCCGGGCTTCGACCGCCAC
TTCATCGACCTCAACTACGACGAGTCGATGGGCCTGGAGGCCGCGGTGCGCAACATCGCCGACCAGGCCGAG
GAAGCCGTGCGCGGCGGCAAGGTGCTGCTGATCCTCAGCGACCGCCATATCGCTCCCGGCAAACTGCCGGTG
CATGCTGCCCTGGCCGTCGGCGCGGTGCATCACCGCCTGGTGCAGACCGGGCTGCGCTGCGACTCCAACATC
CTGGTGGAGACCGCCACCGCCCGCGATCCGCACCATTTCGCGGTGCTGATCGGCTTCGGCGCCTCGGCGGTC
TATCCGTTCCTCGCCTACGAGGTGCTGGCCGACCTGATCCGCACCGGTGAAGTGCTGGGCGACCTCTACGAG
GTGTTCAAGTACTACCGCAAGGGGATCTCCAAGGGCCTGATGAAGATTCTCTCGAAGATGGGCATCTCCACC
GTCGCGTCCTACCGTGGCGCGCAGCTGTTCGAGGCGGTGGGCCTGTCCGACGAGGTCACCGGCCTGTGCTTC
ACCGGAGTCGCCAGCCGCATCCAGGGTGCGCGCTTCGTCGATATCGAGAACGAGCAGAAGCTCCTGGCCGCC
GAGGCCTGGAGCAACCGCAAGCCGATCCAGCAGGGCGGCTTGCTGAAGTTCGTCTATGGCGGCGAATACCAC
GCCTACAACCCGGATGTGGTGAATACCCTGCAGGCTGCCGTGCAGCAGGGCGACTACGAGAAGTTCAAGGAA
TACACCGCGCTGGTGGACCAGCGCCCGGTGTCGATGATCCGCGACCTGTTGCAGGTGAAGACCGCCGCGCAG
CCGCTGGCGCTCGACGAGGTGGAGCCGCTGGAAGCCATCTTCAAGCGCTTCGATGCCGCCGGGATTTCCCTC
GGCGCGCTGTCGCCGGAGGCCCACGAGGCGCTGGCCGAGGCGATGAACACCCTGGGCGGTCGTTCCAACTCC
GGCGAGGGCGGCGAGGACCCGGCGCGCTACGGCACGCTGAAGAGTTCGAAGATCAAGCAGGTGGCTACCGGC
CGCTTCGGCGTGACCCCGGAATACCTGGTCAACGCCGAGGTCCTGCAGATCAAGgTGGCCCAGGGCGCCAAG
CCCGGCGAGGGCGGCCAGTTGCCGGGCGGCAAGGTCAACGGCCTGATCGCCCGCCTGCGCTATGCGGTGCCC
GGCGTGACCCTGATCTCGCCGCCGCCGCACCACGACATCTACTCCATCGAAGACCTGGCGCAGCTGATCTTC
GACCTCAAGCAGGTCAACCCGCAGGCGCTGGTATCGGTGAAGCTGGTATCCGAGCCTGGCGTCGGCACCATC
GCCGCCGGCGTGGCCAAGGCCTATGCGGACTTGATCACCATCTCCGGCTACGACGGCGGTACCGGCGCCTCG
CCGATCACCTCGATCAAGTACGCCGGCTCGCCCTGGGAACTGGGCCTGGCGGAAACCCACCAGACCCTGCGC
GGCAACGACCTGCGCGGCAAGGTCCGGGTGCAGACCGATGGCGGCCTGAAGACCGGCCTGGACGTGATCAAG
GCGGCCATCCTCGGCGCCGAGAGCTTCGGCTTCGGCACCGCACCGATGATCGCCCTGGGCTGCAAGTACCTG
CGCATCTGCCACCTGAACAACTGCGCCACCGGCGTGGCGACGCAGAACGACAAGCTGCGCAAGGACCACTTC
ATCGGCACCACCGCGATGGTGATCAACTTCTTCACCTTCATCGCCACGGAAACCCGCGAGTGGCTGGCGCGC
CTCGGCGTGCGCAGCCTGGGCGAACTGATCGGCCGCACCGACCTGCTGGAGATCCTCCCCGGCGAGACCGCC
AAGCAGCAGAACCTGGATCTCGCTCCGTTGCTGGGCAGTGACCTGATCCCGGCCGACAAGCCGCAGTTCTGC
GAGGTGGAGAAAAACCCGCCGTTCGACCAGGGCCTGCTGGCCGAGAAGATGGTCGAGCTGTCGAAGGCCGCC
ATCGAAGGCCTGAGCGGCGGCGAGTACGAGCTGGACATCTGCAACTGCGACCGATCCATCGGCGCGCGGGTA
TCCGGCGAGATCGCCCGCCTGCACGGCAACCAGGGCATGGCCAAGGCACCGGTGGTGTTCCGTTTCAAGGGC
ACCGCGGGACAGAGCTTCGGCGTGTGGAACGCCGGTGGCCTGCACCTGTACCTGGAAGGCGACGCCAACGAC
TACGTAGGCAAGGGCATGACCGGCGGCAAGCTGGTCATCACCCCGCCCAAGGGCAGTCCGTTCAAGACCCAG
GAATCGGCCATCGTCGGCAACACCTGCCTGTACGGCGCCACCGGCGGCAAGCTGTTCGCCGCCGGAACCGCC
GGCGAGCGCTTCGCCGTGCGCAACTCCGGTTCCCATGCGGTGGTGGAAGGTACCGGCGACCACTGCTGCGAA
TACATGACCGGCGGTTTCGTCTGCGTGCTGGGCAAGACCGGCTACAACTTCGGCTCCGGCATGACCGGGGGC
TTCGCCTACGTCCTCGACATGGACAACACTTTCGTCGACCGTGTGAACCACGAGCTGGTGGAAATCCAGCGG
ATCAGCGGCGAGGCGATGGAGGCCTATCGCAGCCACCTGCGCAAGGTCCTGGTCGAGTACGTGAACGAAACG
GCAAGCGAGTGGGGCGCGAACATCCTGGAAAACCTGGATGACTACCTGCGACGGTTCTGGCTGGTGAAACCG
AAGGCGGCCAGCCTCGGTTCGCTGCTGACCAGCACCCGTGCCAACCCGCAATAA |
Translation:
MKAGLYHPETFKDNCGFGLIAHMQGEPSHQLLQTAIEALTCMTHRGGINADGKTGDGCGLLIQKPDLFLRAV
AREAFSVDLPEQYAVGMVFFNQDPVKAEAARENMNREIVAAGLELVGWRKVPIDTSVLGRLALERLPQIEQV
FIGGAGLSDQDFAIKLFSARRRSSVANAADSDHYICSFSHKTIIYKGLMMPADLAAFYPDLGDERLQTAICV
FHQRFSTNTLPKWPLAQPFRFLAHNGEINTITGNRNWAQARRTKFTNELIPDLEELGPLVNRVGSDSSSMDN
MLELMVTGGMDLFRGLRMIIPPAWQNVETMDADLRAFYEYNSLHMEPWDGPAGVVLTDGRYAVCLLDRNGLR
PSRWVTTKNGYITLASEIGVWDYKPEDVIAKGRVGPGQILAVDTETGQVLHSDDIDNRLKSRHPYKQWLRQN
ALRIQATLDDDHGVASYDADQLKQFMKMFQVTFEERDQVLRPLGEQGQEAVGSMGDDTPMAILSRRIRSPYD
YFRQQFAQVTNPPIDPLREAIVMSLETCLGVEQNIFEEAPHHANQAILTTPVISPAKWRTIMTLDRPGFDRH
FIDLNYDESMGLEAAVRNIADQAEEAVRGGKVLLILSDRHIAPGKLPVHAALAVGAVHHRLVQTGLRCDSNI
LVETATARDPHHFAVLIGFGASAVYPFLAYEVLADLIRTGEVLGDLYEVFKYYRKGISKGLMKILSKMGIST
VASYRGAQLFEAVGLSDEVTGLCFTGVASRIQGARFVDIENEQKLLAAEAWSNRKPIQQGGLLKFVYGGEYH
AYNPDVVNTLQAAVQQGDYEKFKEYTALVDQRPVSMIRDLLQVKTAAQPLALDEVEPLEAIFKRFDAAGISL
GALSPEAHEALAEAMNTLGGRSNSGEGGEDPARYGTLKSSKIKQVATGRFGVTPEYLVNAEVLQIKVAQGAK
PGEGGQLPGGKVNGLIARLRYAVPGVTLISPPPHHDIYSIEDLAQLIFDLKQVNPQALVSVKLVSEPGVGTI
AAGVAKAYADLITISGYDGGTGASPITSIKYAGSPWELGLAETHQTLRGNDLRGKVRVQTDGGLKTGLDVIK
AAILGAESFGFGTAPMIALGCKYLRICHLNNCATGVATQNDKLRKDHFIGTTAMVINFFTFIATETREWLAR
LGVRSLGELIGRTDLLEILPGETAKQQNLDLAPLLGSDLIPADKPQFCEVEKNPPFDQGLLAEKMVELSKAA
IEGLSGGEYELDICNCDRSIGARVSGEIARLHGNQGMAKAPVVFRFKGTAGQSFGVWNAGGLHLYLEGDAND
YVGKGMTGGKLVITPPKGSPFKTQESAIVGNTCLYGATGGKLFAAGTAGERFAVRNSGSHAVVEGTGDHCCE
YMTGGFVCVLGKTGYNFGSGMTGGFAYVLDMDNTFVDRVNHELVEIQRISGEAMEAYRSHLRKVLVEYVNET
ASEWGANILENLDDYLRRFWLVKPKAASLGSLLTSTRANPQ* |
AnnotationID:22 | GeneID:12 |
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Modification Date/Time: |
2005-04-26 10:10:06 |
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GeneProduct: | glutamate synthase large chain precursor |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (2) Amino acid biosynthesis and metabolism |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAN70641.1|AE016708_2 (AE016793) glutamate synthase, large subunit [Pseudomonas putida
KT2440]
Length = 1481
Score = 2667 bits (6914), Expect = 0.0
Identities = 1300/1481 (87%), Positives = 1406/1481 (94%)
>gb|AAO58550.1| (AE016874) glutamate synthase, large subunit [Pseudomonas syringae
pv. tomato str. DC3000]
Length = 1481
Score = 2662 bits (6899), Expect = 0.0
Identities = 1304/1482 (87%), Positives = 1400/1482 (94%), Gaps = 2/1482 (0%)
>gb|AAO09072.1|AE016798_232 (AE016798) Glutamate synthase, large subunit [Vibrio vulnificus
CMCP6]
Length = 1487
Score = 1842 bits (4771), Expect = 0.0
Identities = 919/1474 (62%), Positives = 1134/1474 (76%), Gaps = 9/1474 (0%)
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Structural Features: | pfam04897, Glu_synth_NTN, Glutamate synthase amidotransferase domain.
CD-Length = 431 residues, 100.0% aligned
Score = 637 bits (1646), Expect = 0.0
Identities = 231/431 (53%), Positives = 297/431 (68%), Gaps = 5/431 (1%)
COG0069, GltB, Glutamate synthase domain 2 [Amino acid transport and metabolism]
CD-Length = 485 residues, 99.8% aligned
Score = 641 bits (1654), Expect = 0.0
Identities = 286/485 (58%), Positives = 341/485 (70%), Gaps = 5/485 (1%)
cd00713, Glut_synth, Glutamine amidotransferases class-II (Gn-AT)
glutamate synthase (Glts)-type.
CD-Length = 410 residues, 100.0% aligned
Score = 515 bits (1328), Expect = 1e-146
Identities = 194/411 (47%), Positives = 266/411 (64%), Gaps = 6/411 (1%)
pfam01645, Glu_synthase, Conserved region in glutamate synthase.
CD-Length = 368 residues, 100.0% aligned
Score = 500 bits (1288), Expect = 6e-142
Identities = 222/368 (60%), Positives = 266/368 (72%), Gaps = 3/368 (0%)
COG0067, GltB, Glutamate synthase domain 1 [Amino acid transport and metabolism]
CD-Length = 371 residues, 99.7% aligned
Score = 479 bits (1233), Expect = 1e-135
Identities = 193/378 (51%), Positives = 244/378 (64%), Gaps = 9/378 (2%) |
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