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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG07804.1|AE004856_15 (AE004856) UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase [Pseudomonas aeruginosa PAO1]
Identities = 457/458 (99%), Positives = 458/458 (100%)
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Sequence:
ATGCTTGAGCCTCTTCGCCTCAGCCAGTTGACGGTCGCGCTGGACGCCCGCCTGATCGGCGAGGACGCCGTC
TTTTCGGCGGTTTCCACCGACAGTCGCGCCATCGGGCCCGGCCAACTGTTCATTGCCCTGAGTGGGCCGCGT
TTCGACGGCCACGACTATCTCTCCGAGGTTGCCGCCAAGGGCGCGGTGGCTGCGCTGGTGGAGCGCGAAGTC
GCCGACGCGCCCCTGCCGCAATTGCTGGTGCGCGATACCCGTGCGGCCCTGGGGCGACTGGGCGCGCTGAAC
CGGCGCAAGTTCACCGGCCCGCTGGCGGCCATGACGGGCTCCAGCGGCAAGACCACGGTCAAGGAGATGCTC
GCCAGCATCCTGCGTACCCAGGCCGGCGATGCCGAGTCGGTGCTGGCTACCCGTGGCAATCTGAACAACGAC
CTCGGCGTACCGCTGACCCTGCTGCAACTGGCGCCGCAGCACCGTAGCGCAGTGATCGAACTGGGCGCCTCG
CGCATCGGCGAGATCGCCTACACGGTCGAGCTGACCCGCCCGCACGTGGCGATCATCACCAATGCCGGCACC
GCCCATGTCGGCGAGTTCGGCGGACCGGAGAAGATCGTCGAGGCGAAGGGCGAGATACTCGAAGGGCTGGCC
GCCGACGGCACCGCCGTGCTGAACCTGGACGACAAGGCCTTCGACACCTGGAAGGCCCGTGCCAGCGGCCGT
CCGTTGCTGACTTTCTCCCTCGACCGGCCCCAGGCCGATTTCCGCGCCGCCGATCTGCAGCGCGATGCGCGC
GGCTGCATGGGCTTCAGGCTGCAGGGCGTAGCGGGTGAAGCGCAGGTCCAGCTCAACCTGCTGGGGCGGCAC
AATGTCGCCAATGCCCTGGCTGCCGCCGCTGCCGCCCATGCACTGGGCGTGCCGCTGGATGGGATCGTCGCC
GGGCTGCAGGCGCTGCAGCCGGTCAAGGGCCGCGCGGTAGCGCAACTGACCGCCAGCGGGCTGCGTGTGATA
GACGACAGCTACAACGCCAACCCCGCGTCAATGCTGGCGGCGATTGATATACTGAGCGGCTTTTCCGGGCGC
ACCGTCCTGGTCCTCGGAGACATGGGCGAACTCGGTTCCTGGGCCGAGCAGGCCCACCGCGAGGTGGGCGCC
TACGCCGCTGGCAAGGTGTCCGCGCTCTATGCGGTCGGACCGCTGATGGCCCACGCCGTACAGGCGTTCGGC
GCCACGGGCCGGCACTTCGCCGACCAGGCCAGCCTGATCGGGGCGCTGGCCACCGAACAACCGACAACCACC
ATTTTGATCAAGGGTTCCCGCAGCGCGGCGATGGACAAAGTCGTCGCGGCGCTGTGCGGTTCCTCCGAGGAG
AGTCACTAA |
Translation:
MLEPLRLSQLTVALDARLIGEDAVFSAVSTDSRAIGPGQLFIALSGPRFDGHDYLSEVAAKGAVAALVEREV
ADAPLPQLLVRDTRAALGRLGALNRRKFTGPLAAMTGSSGKTTVKEMLASILRTQAGDAESVLATRGNLNND
LGVPLTLLQLAPQHRSAVIELGASRIGEIAYTVELTRPHVAIITNAGTAHVGEFGGPEKIVEAKGEILEGLA
ADGTAVLNLDDKAFDTWKARASGRPLLTFSLDRPQADFRAADLQRDARGCMGFRLQGVAGEAQVQLNLLGRH
NVANALAAAAAAHALGVPLDGIVAGLQALQPVKGRAVAQLTASGLRVIDDSYNANPASMLAAIDILSGFSGR
TVLVLGDMGELGSWAEQAHREVGAYAAGKVSALYAVGPLMAHAVQAFGATGRHFADQASLIGALATEQPTTT
ILIKGSRSAAMDKVVAALCGSSEESH* |
AnnotationID:1179 | GeneID:1170 |
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Modification Date/Time: |
2005-05-02 18:06:00 |
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GeneProduct: | UDP-N-acetylmuramyl pentapeptide synthase |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (7) Cell wall / LPS / capsule |
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Alternate Gene Product Name: | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAO57861.1| (AE016871) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,
6-diaminopimelate--D-alanyl-D-alanyl ligase [Pseudomonas
syringae pv. tomato str. DC3000]
Length = 456
Score = 633 bits (1632), Expect = 0.0
Identities = 332/460 (72%), Positives = 376/460 (81%), Gaps = 6/460 (1%)
>gb|AAN66956.1|AE016324_6 (AE016779) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,
6-diaminopimelate--D-alanyl-D-alanyl ligase [Pseudomonas
putida KT2440]
Length = 455
Score = 621 bits (1601), Expect = e-177
Identities = 324/459 (70%), Positives = 369/459 (80%), Gaps = 5/459 (1%) |
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Structural Features: | COG0770, MurF, UDP-N-acetylmuramyl pentapeptide synthase
[Cell envelope biogenesis, outer membrane]
CD-Length = 451 residues, 99.6% aligned
Score = 445 bits (1147), Expect = 9e-126
Identities = 213/455 (46%), Positives = 274/455 (60%), Gaps = 12/455 (2%)
COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase
[Cell envelope biogenesis, outer membrane]
CD-Length = 475 residues, only 74.9% aligned
Score = 148 bits (375), Expect = 3e-36
Identities = 110/360 (30%), Positives = 168/360 (46%), Gaps = 22/360 (6%)
pfam01225, Mur_ligase, Mur ligase family, catalytic domain.
CD-Length = 267 residues, 100.0% aligned
Score = 144 bits (365), Expect = 3e-35
Identities = 89/280 (31%), Positives = 127/280 (45%), Gaps = 18/280 (6%)
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