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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG05726.1|AE004660_2 (AE004660) probable binding protein component of ABC maltose/mannitol transporter [Pseudomonas aeruginosa PAO1]
Identities = 435/436 (99%), Positives = 436/436 (100%)
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Sequence:
ATGAACGACTCGATCAAGGCCTGCCTGGCCGCCGCCTGCCTCGCCCTGCCGCTGCTGGCCCAGGGCGCCGAG
ACCCTGACCATCGCCACGGTCAACAACAACGACATGATCCGCATGCAGCGCCTGTCCAAGGTGTTCGAGGAA
AGCCACCCGGACATCTCGCTGAAATGGGTGGTGCTCGAAGAGAACGTCCTGCGCCAGCGCCTGACCACCGAC
ATCGCCACCCAGGGCGGACAGTTCGACCTGCTCACCATCGGCATGTACGAAGCCGCGCTGTGGGGCGCCAAG
GGCTGGCTGGAGCCGATGAGCGGGCTGCCCGCCGACTACGCCCTGGACGACCTGTTGCCCTCGGTGCGCGAC
GGTCTCTCCGTCAAGGGCACGCTGTACGCCCTGCCGTTCTACGCCGAAGCCTCGATCACCTACTACCGCAAG
GACCTGTTCCAGCAGGCCGGGCTGCGGATGCCCGAGCAACCGACCTGGACCCAGCTCGGCGAGTTCGCCGCC
AGGCTCAACCGCCCGGACCAGGGCCAGTACGGCATCTGCCTGCGCGGCAAGGCCGGCTGGGGCGAGAACATG
GCGTTGATCGGCACCCTGGCCAACGCCTTCGGCGCACGCTGGTTCGACGAGCGATGGCAGCCCGAATTCAGC
GGCGGCGAATGGAAGAAGGCTCTCGACTTCTATGTCTCCACCCTCAAGCGGTACGGCCCGCCCGGCGCCTCC
AGCAACGGTTTCAACGAGAACCTGGCGCTGTTCAACAGCGGCAAGTGCGCGATCTGGGTGGACGCCAGCGTC
GCCGGTTCGTTCGTCACCGACAAGAGCCAGAGCAAGGTCGCCGACGCCACCGGCTTCGCCTTCGCCCCCCGG
GAAGTCACCGACAAGGGCGCCTCCTGGCTGTATTCCTGGGCCCTGGCGATTCCCGCCAGCTCGCGCGCCAAG
GACGCGGCGAAGGCCTTCGCCACCTGGGCCACCTCGCAGGCGTACGGCAAGCTGGTGGCGGACAGGGAAGGC
GTGGCCAACGTGCCGCCCGGCACCCGCGCCTCGACCTACAGCGAGGCCTACCTGGCCGCCGCGCCGTTCGCG
CGGGTCACCCTGGAATCGCTGAAGCGCGTCGATCCCAACCATCCGACGCTGAAGCCGGTGCCCTACGTCGGC
ATCCAGTTGGTCACCATCCCCGAGTTCCAGGCCATCGGCACCCAGGTCGGCAAGCTGTTCTCCGCCGCCCTC
ACCGGGCAGATGAGCAGCGACCAGGCGCTCGCCGCCGCGCAGCAGAGCACCGCCCGCGAGATGAAGCGCGCC
GGCTATCCGAAGTAG |
Translation:
MNDSIKACLAAACLALPLLAQGAETLTIATVNNNDMIRMQRLSKVFEESHPDISLKWVVLEENVLRQRLTTD
IATQGGQFDLLTIGMYEAALWGAKGWLEPMSGLPADYALDDLLPSVRDGLSVKGTLYALPFYAEASITYYRK
DLFQQAGLRMPEQPTWTQLGEFAARLNRPDQGQYGICLRGKAGWGENMALIGTLANAFGARWFDERWQPEFS
GGEWKKALDFYVSTLKRYGPPGASSNGFNENLALFNSGKCAIWVDASVAGSFVTDKSQSKVADATGFAFAPR
EVTDKGASWLYSWALAIPASSRAKDAAKAFATWATSQAYGKLVADREGVANVPPGTRASTYSEAYLAAAPFA
RVTLESLKRVDPNHPTLKPVPYVGIQLVTIPEFQAIGTQVGKLFSAALTGQMSSDQALAAAQQSTAREMKRA
GYPK* |
AnnotationID:1174 | GeneID:1165 |
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Modification Date/Time: |
2005-09-26 15:03:56 |
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GeneProduct: | putative binding protein component of ABC maltose/mannitol transporter |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (27) Transport of small molecules |
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Alternate Gene Product Name: | periplasmic sorbitol-binding protein |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | carbohydrate transport and metabolism |
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Homology: | >gb|AAC04468.1| (AF007800) MtlE [Pseudomonas fluorescens]
Length = 436
Score = 695 bits (1793), Expect = 0.0
>gb|AAO56208.1| (AE016865) mannitol ABC transporter, periplasmic mannitol-binding
protein [Pseudomonas syringae pv. tomato str. DC3000]
Length = 440
Score = 650 bits (1678), Expect = 0.0
Identities = 320/439 (72%), Positives = 363/439 (82%), Gaps = 3/439 (0%)
>gb|AAC45766.1| (AF018073) periplasmic sorbitol-binding protein; SmoE [Rhodobacter
sphaeroides]
Length = 436
Score = 534 bits (1375), Expect = e-151
Identities = 255/436 (58%), Positives = 312/436 (71%) |
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Structural Features: | COG1653, UgpB, ABC-type sugar transport system, periplasmic component
[Carbohydrate transport and metabolism]
CD-Length = 433 residues, 96.5% aligned
Score = 150 bits (379), Expect = 3e-37
Identities = 104/432 (24%), Positives = 168/432 (38%), Gaps = 21/432 (4%)
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