ViewGene

Locus Name:
GeneID:
Location:

GeneID:1163
TrivialName: PA14_07070
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_07070
PAO1 Ortholog Locus:PA0545
Sequence Length:1305
Protein Length:434
Start: 612321
Stop: 613625
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG03934.1|AE004491_1 (AE004491) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 429/434 (98%), Positives = 430/434 (99%)
Sequence:
ATGAAACTGTTATGGGGAGTTCTCGCCGCCGCGCTGGCGGCCTGGGGCCTGACGCTGGCCGTCGATCCGCCG
GCGAGCCTGGATATCTGGGTGGTGCGCAAGCAGGCGATCCTGCTTACCGGGGTAGCGTCCTTCGCCCTGATG
TCGTTGATCATGCTGCTGGCGGTGCGTCCGGTCTGGCTGGAGAAGCCGCTGGACGGGCTCGACCGCATGTAC
CGCCTGCACAAGTGGGCGGGCATCCTGGCCATCGTCCTCGGCCTGTTGCACTACCTGCTGGAGTTGGCCGGC
CCCTGGCTGGCGGGTATCGTCGGCAAACCGGTGAAAGGCCCGCGGGTGGAAACCTTCCTCGACGTCTTCCGT
GGCTCGGCCAAGGAGTTGGGTGAATGGTCGGCGTGGATTCTCGGCGGGATGCTGCTGATCACTCTCTGGCAG
CGCTTCCCGTATCACCTCTGGCGTTATGTGCACAAGGCGTTGGCCCTGGTCTACCTGGTACTGGCCTTCCAT
TCCGTGGTGCTCGCCCCGGCCAGCTACTGGAGCCAGCCGGCCGGTTGGCTGGTGGCGGCCTGCGCTCTGCTC
GGTTCGGCCTGCGCACTGTTGTCTCTGAGCGGGCGGATCGGTCGCGCGCGCCGCCATGCGGGCGTGGTCACC
GCCGTCGAGCGGCGCGGCGAAAGCCTGCTCGAGGTGACCTGCCGGCTGCAGGGCGACTGGTCGCACAGGGCC
GGGCAGTTCGCCTTTCTCACCTGCGACCGCCTGGAGGGTGCCCATCCGTTCACCATCGCCAGCGCCGACCGC
GGCTGCGGCGAGGTGCGCTTCAGCATCAAGGTGTTGGGCGACTACACCCGGCGCCTGCAGGACAACCTGGAG
GTCGGCGCCAGGGTCGAGGTGGAGGGGCCATACGGCTGCTTCGACTTCCGCCGTGGCCTGGCCGGGCGGCAG
GTCTGGGTCGCCGCCGGGATCGGCGTGACGCCGTTCATCGCCTGGCTGGAGTCGCTGCAGGCCGTGCCGGAA
AGCGCGCCATCGGTGGAGCTGCACTATTGCGTGCGCAATTCCCAGGAAGCGCTGTTCGCCGGGCGCTTGCGC
GAGCTTTGCGAACACCTGCCCAGCGTGACCCTGCACATCCGCTATAGCGACGAGCAGGGCAAGCCGCAGGCG
GCTCAACTGGGCGTGCTGAAGAGCGCCGAAGGACGCTGGCCGAGCGTCTGGTTCTGCGGTCCGCAGGGGCTG
GCCGACAGCCTGCGCCGCGATCTGCGCCGGCAGGGCATGCCGCTGCGGCTGTTCCACCAGGAAGCCTTCCGT
ATGCGCTGA
Translation:
MKLLWGVLAAALAAWGLTLAVDPPASLDIWVVRKQAILLTGVASFALMSLIMLLAVRPVWLEKPLDGLDRMY
RLHKWAGILAIVLGLLHYLLELAGPWLAGIVGKPVKGPRVETFLDVFRGSAKELGEWSAWILGGMLLITLWQ
RFPYHLWRYVHKALALVYLVLAFHSVVLAPASYWSQPAGWLVAACALLGSACALLSLSGRIGRARRHAGVVT
AVERRGESLLEVTCRLQGDWSHRAGQFAFLTCDRLEGAHPFTIASADRGCGEVRFSIKVLGDYTRRLQDNLE
VGARVEVEGPYGCFDFRRGLAGRQVWVAAGIGVTPFIAWLESLQAVPESAPSVELHYCVRNSQEALFAGRLR
ELCEHLPSVTLHIRYSDEQGKPQAAQLGVLKSAEGRWPSVWFCGPQGLADSLRRDLRRQGMPLRLFHQEAFR
MR*
AnnotationID:1172GeneID:1163
AnnotatorUID: diggins
Modification Date/Time: 2005-03-28 18:06:07
Gene Name:
Confidence Code:3
GeneProduct:putative reductase
Cell Localization:()
Synonyms:PA0545
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(12) Energy metabolism
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:COG4097
Secondary Functional Category(ies):transport of small molecules
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
COG4097, Predicted ferric reductase 
[Inorganic ion transport and metabolism]
CD-Length = 438 residues, 100.0% aligned
Score =  534 bits (1376), Expect = 9e-153
Identities = 199/446 (44%), Positives = 258/446 (57%), Gaps = 20/446 (4%)
Genomic Context:
Comment:
ReferenceID:2329
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:19471
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
ReferenceID:33849
Author/Investigator(s):
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:Misc (text/plain)
Data:1163_cdd.html
URL:
Homologs By Global Alignment
Gene ID:1163

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
2090 PA0545_tr translation of PA0545 434 98.84 99.07 0 2267.0
69819 gb|AAG03934.1|AE004491_1 (AE004491) hypothetical protein PA0545 [Pseudomonas aeruginosa PAO1] 434 98.84 99.07 0 2267.0
69822 emb|CAE42243.1| (BX640416) putative flavocytochrome [Bordetella pertussis] [Bordetella pertussis Tohama I] 465 42.79 56.98 50 833.0
69820 emb|CAE32281.1| (BX640442) putative flavocytochrome [Bordetella bronchiseptica] [Bordetella bronchiseptica RB50] 487 40.86 54.20 72 833.0
69821 emb|CAE37630.1| (BX640430) putative flavocytochrome [Bordetella parapertussis] 498 40.16 53.01 83 832.0
GC ORFID: 44165How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA0545Glimmer Score:
Start: 6413663Stop: 6414967
Length: 1305
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: t_PA0545 translation of PA0545Homolog Bit Score 877.0
Other Homologs: t_PA0545 (ORF: GLIMMER)
GC ORF Sequence
ATGAAACTGTTATGGGGAGTTCTCGCCGCCGCGCTGGCGGCCTGGGGCCTGACGCTGGCCGTCGATCCGCCG
GCGAGCCTGGATATCTGGGTGGTGCGCAAGCAGGCGATCCTGCTTACCGGGGTAGCGTCCTTCGCCCTGATG
TCGTTGATCATGCTGCTGGCGGTGCGTCCGGTCTGGCTGGAGAAGCCGCTGGACGGGCTCGACCGCATGTAC
CGCCTGCACAAGTGGGCGGGCATCCTGGCCATCGTCCTCGGCCTGTTGCACTACCTGCTGGAGTTGGCCGGC
CCCTGGCTGGCGGGTATCGTCGGCAAACCGGTGAAAGGCCCGCGGGTGGAAACCTTCCTCGACGTCTTCCGT
GGCTCGGCCAAGGAGTTGGGTGAATGGTCGGCGTGGATTCTCGGCGGGATGCTGCTGATCACTCTCTGGCAG
CGCTTCCCGTATCACCTCTGGCGTTATGTGCACAAGGCGTTGGCCCTGGTCTACCTGGTACTGGCCTTCCAT
TCCGTGGTGCTCGCCCCGGCCAGCTACTGGAGCCAGCCGGCCGGTTGGCTGGTGGCGGCCTGCGCTCTGCTC
GGTTCGGCCTGCGCACTGTTGTCTCTGAGCGGGCGGATCGGTCGCGCGCGCCGCCATGCGGGCGTGGTCACC
GCCGTCGAGCGGCGCGGCGAAAGCCTGCTCGAGGTGACCTGCCGGCTGCAGGGCGACTGGTCGCACAGGGCC
GGGCAGTTCGCCTTTCTCACCTGCGACCGCCTGGAGGGTGCCCATCCGTTCACCATCGCCAGCGCCGACCGC
GGCTGCGGCGAGGTGCGCTTCAGCATCAAGGTGTTGGGCGACTACACCCGGCGCCTGCAGGACAACCTGGAG
GTCGGCGCCAGGGTCGAGGTGGAGGGGCCATACGGCTGCTTCGACTTCCGCCGTGGCCTGGCCGGGCGGCAG
GTCTGGGTCGCCGCCGGGATCGGCGTGACGCCGTTCATCGCCTGGCTGGAGTCGCTGCAGGCCGTGCCGGAA
AGCGCGCCATCGGTGGAGCTGCACTATTGCGTGCGCAATTCCCAGGAAGCGCTGTTCGCCGGGCGCTTGCGC
GAGCTTTGCGAACACCTGCCCAGCGTGACCCTGCACATCCGCTATAGCGACGAGCAGGGCAAGCCGCAGGCG
GCTCAACTGGGCGTGCTGAAGAGCGCCGAAGGACGCTGGCCGAGCGTCTGGTTCTGCGGTCCGCAGGGGCTG
GCCGACAGCCTGCGCCGCGATCTGCGCCGGCAGGGCATGCCGCTGCGGCTGTTCCACCAGGAAGCCTTCCGT
ATGCGCTGA