ViewGene

Locus Name:
GeneID:
Location:

GeneID:1137
TrivialName: PA14_26190
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_26190
PAO1 Ortholog Locus:PA2927
Sequence Length:1332
Protein Length:443
Start: 2287367
Stop: 2286036
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG06315.1|AE004719_1 (AE004719) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 438/443 (98%), Positives = 438/443 (98%)
Sequence:
ATGCCCCGTTCGATCGTCATCGTCCACGGCTGGAGCGACGATTCGAAGTCGTTCCGCCGCCTCGCCGAGCAG
CTGGAAGCCTGGTTCGGCAGCGCGCCGACGCAGATCCGCCTCGCCGACTGGATCTCCCTGCAGGACGACGTC
ACCTACGCCGATCTCGCCGCCGCCCTGGATCGCGCCTGGACCGCCCAGGGACTGTCGCGGGCGCCGCGCACG
GTGGACGTGGTGGTGCACAGCACCGGCGCCCTGGTGCTGCGCGACTGGCTGACCCGCCACTTCGACCCCGCC
AGCGCGCCGGTCAAGCGCTTCCTGATGCTCGCCCCGGCCAACTTCGGCTCGCCGCTGGCGCACAAGGGACGC
TCCTTCATCGGTCGCGTGCTGAAAGGCTGGAACCGCTTCGTCGGGCAGACCGGCACCCAGGTGCTGAAGGGA
CTGGAGCTGGGCTCGCCGTACTCCTGGCAACTCGCCGAGCGCGACCTGTTCGGCGCCGAGGCCTGGTACGGC
GCCGGCCGCCTGCTCGCCACGGTACTGGTGGGCAATGTCGGCTACAGCGGCGTCGAAGCCATCGCCAACGAA
GTCGGCGGCGACGGCACGGTGCGGATCGCCACGGCGAACCTCAACGCCTGCCGCCTGAGCCTCGAACTGGAT
GTCCGCCAGCGCGCCAGGCCCGGCTGGCGCCTGGAAGAATCGCGCGGCGAGATCGCCTTCGCCATCGTCGAC
GGCGAGAACCACGCCAGCGTGGCGCTGAAGGACCGCGGGCCGAAGAACCCGCATACCCTGGAGCTGATCCGC
GCCGCACTGGAGGTCGAGGACGCCGATTACCGGAGCAGCGGCGCAAGCTTCCCCTGGCAGCGCCGCATCGAT
CAGCTCGACCCCGGCATCGAGCGCCGCTCGCCGCGCTACCTGAACCTGGTCAGCCACGTCTGCGACGACCTC
GACCAGGAGGTGCGCGACTACTTCATCCAGTTCTTCCGCAAGCTGAACAGCGACCGGCGTTTCGAGCAGCGC
TTCTACGAGCAGGTCATCGCCGACGTCCATCCCTACGAGGACAACCCCGCCTACCGCTCGCTGTACCTGTCG
ATCGAGTCCCTCGACGACCTGCTCGCCGGCTTCGCCGTGGACACCCTGTCGCTCAGCGTGTCGGCCCAGCCG
CCGTTCGATCCGCCGCGCCAGCCGGTCGGCTATACCGCGGTGGGCCCCGGCGACAGCGAAGGCCTGGCGATT
CCGCTGGCGCAGGTGCCGCGCTTCCTCGCCGCCCACCGCACCCTGCTGTTGCGCATCCGCCTGACGCGCCTG
GTGGACAGCGGCGTATTCGTCTTCAGGAACCCCTGA
Translation:
MPRSIVIVHGWSDDSKSFRRLAEQLEAWFGSAPTQIRLADWISLQDDVTYADLAAALDRAWTAQGLSRAPRT
VDVVVHSTGALVLRDWLTRHFDPASAPVKRFLMLAPANFGSPLAHKGRSFIGRVLKGWNRFVGQTGTQVLKG
LELGSPYSWQLAERDLFGAEAWYGAGRLLATVLVGNVGYSGVEAIANEVGGDGTVRIATANLNACRLSLELD
VRQRARPGWRLEESRGEIAFAIVDGENHASVALKDRGPKNPHTLELIRAALEVEDADYRSSGASFPWQRRID
QLDPGIERRSPRYLNLVSHVCDDLDQEVRDYFIQFFRKLNSDRRFEQRFYEQVIADVHPYEDNPAYRSLYLS
IESLDDLLAGFAVDTLSLSVSAQPPFDPPRQPVGYTAVGPGDSEGLAIPLAQVPRFLAAHRTLLLRIRLTRL
VDSGVFVFRNP*
AnnotationID:1146GeneID:1137
AnnotatorUID: diggins
Modification Date/Time: 2005-04-08 10:10:28
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:PA2927
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:2277
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:19419
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
Homologs By Global Alignment
Gene ID:1137

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
2034 PA2927_tr translation of PA2927 443 98.87 98.87 0 2276.0
68735 gb|AAG06315.1|AE004719_1 (AE004719) hypothetical protein PA2927 [Pseudomonas aeruginosa PAO1] 443 98.87 98.87 0 2276.0
GC ORFID: 44139How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA2927Glimmer Score:
Start: 2666558Stop: 2667889
Length: 1332
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: t_PA2927 translation of PA2927Homolog Bit Score 881.0
Other Homologs: t_PA2927 (ORF: GLIMMER)
GC ORF Sequence
ATGCCCCGTTCGATCGTCATCGTCCACGGCTGGAGCGACGATTCGAAGTCGTTCCGCCGCCTCGCCGAGCAG
CTGGAAGCCTGGTTCGGCAGCGCGCCGACGCAGATCCGCCTCGCCGACTGGATCTCCCTGCAGGACGACGTC
ACCTACGCCGATCTCGCCGCCGCCCTGGATCGCGCCTGGACCGCCCAGGGACTGTCGCGGGCGCCGCGCACG
GTGGACGTGGTGGTGCACAGCACCGGCGCCCTGGTGCTGCGCGACTGGCTGACCCGCCACTTCGACCCCGCC
AGCGCGCCGGTCAAGCGCTTCCTGATGCTCGCCCCGGCCAACTTCGGCTCGCCGCTGGCGCACAAGGGACGC
TCCTTCATCGGTCGCGTGCTGAAAGGCTGGAACCGCTTCGTCGGGCAGACCGGCACCCAGGTGCTGAAGGGA
CTGGAGCTGGGCTCGCCGTACTCCTGGCAACTCGCCGAGCGCGACCTGTTCGGCGCCGAGGCCTGGTACGGC
GCCGGCCGCCTGCTCGCCACGGTACTGGTGGGCAATGTCGGCTACAGCGGCGTCGAAGCCATCGCCAACGAA
GTCGGCGGCGACGGCACGGTGCGGATCGCCACGGCGAACCTCAACGCCTGCCGCCTGAGCCTCGAACTGGAT
GTCCGCCAGCGCGCCAGGCCCGGCTGGCGCCTGGAAGAATCGCGCGGCGAGATCGCCTTCGCCATCGTCGAC
GGCGAGAACCACGCCAGCGTGGCGCTGAAGGACCGCGGGCCGAAGAACCCGCATACCCTGGAGCTGATCCGC
GCCGCACTGGAGGTCGAGGACGCCGATTACCGGAGCAGCGGCGCAAGCTTCCCCTGGCAGCGCCGCATCGAT
CAGCTCGACCCCGGCATCGAGCGCCGCTCGCCGCGCTACCTGAACCTGGTCAGCCACGTCTGCGACGACCTC
GACCAGGAGGTGCGCGACTACTTCATCCAGTTCTTCCGCAAGCTGAACAGCGACCGGCGTTTCGAGCAGCGC
TTCTACGAGCAGGTCATCGCCGACGTCCATCCCTACGAGGACAACCCCGCCTACCGCTCGCTGTACCTGTCG
ATCGAGTCCCTCGACGACCTGCTCGCCGGCTTCGCCGTGGACACCCTGTCGCTCAGCGTGTCGGCCCAGCCG
CCGTTCGATCCGCCGCGCCAGCCGGTCGGCTATACCGCGGTGGGCCCCGGCGACAGCGAAGGCCTGGCGATT
CCGCTGGCGCAGGTGCCGCGCTTCCTCGCCGCCCACCGCACCCTGCTGTTGCGCATCCGCCTGACGCGCCTG
GTGGACAGCGGCGTATTCGTCTTCAGGAACCCCTGA