Modification Date/Time: 2006-04-06 13:01:23
Missense Discrepancy: FALSE
Comments:Homology: gb|AAG07997.1| AE004875_3 (AE004875) DNA repair protein RadA [Pseudomonas aeruginosa PAO1]
Identities = 453/453 (100%), Positives = 453/453 (100%)
Sequence:
ATGGCCAAGGCCAAGCGCATGTACGGCTGCACCGAGTGTGGCGCGACCTTCCCGAAATGGGCCGGCCAGTGT
GCGGATTGCGGGGCCTGGAACACCCTGGTGGAGACCGTCGTCGAGGCCGCGCCGAGCGGCTCCGGGCGCGGC
GGCTGGGCCGGCCAGCAGGCCAACCTGAAGACCCTGGCGGAGGTCAGCGTCGAGGAGATGCCGCGCTTCACG
ACCGGTTCCACCGAACTGGACCGGGTTCTCGGCGGCGGCCTGGTGGACGGTTCGGTGGTGCTGATCGGCGGC
GATCCCGGCATCGGCAAGTCGACCATTCTCCTGCAGACCCTTTGCAACCTGGCCAGCCGCGTCCCGGCGCTG
TACGTCACCGGCGAGGAATCCCAGCAGCAGGTGGCGATGCGCGCGCGGCGCCTGTCGTTGCCGGAAGACAAG
CTCAAGGTGATGACCGAGACCAGCATCGAGACCATCATCGCCACCGCGCGCCAGGAGCAGCCGCGGGTGATG
GTGATCGACTCGATCCAGACCATCTTCACCGAGCAGTTGCAATCGGCGCCGGGCGGCGTCGCCCAGGTCCGC
GAGAGCGCCGCGATGCTGGTGCGCTATGCCAAGCAGAGCGGCACGGCGATCTTCCTGGTCGGCCACGTGACC
AAGGAAGGCGCCCTGGCCGGCCCGCGGGTGCTCGAACACATGGTCGACACCGTACTGTATTTCGAAGGCGAG
TCAGACGGCCGCCTGCGCCTGCTGCGGGCAGTGAAGAACCGCTTCGGCGCGGTCAACGAACTGGGAGTGTTC
GGCATGACCGACAAAGGCCTGAAGGAAGTGAGCAACCCTTCGGCGATCTTCCTCACGCGGGCCCAGGAAGCG
GTGCCCGGCAGCGTGGTGATGGCCACCTGGGAAGGCTCGCGGCCGATGCTGGTGGAGGTCCAGGCGCTGGTC
GACACCAGTCACCTGGCGAATCCGCGGCGGGTGACCCTGGGCCTCGACCAGAACCGCCTGGCGATGCTGCTG
GCGGTGCTGCACCGGCACGGCGGTATCCCGACCTACGACCAGGACGTGTTCCTCAACGTGGTGGGTGGGGTC
AAGGTGCTGGAAACCGCCTCCGACCTGGCGTTGATGGCGGCGGTGATGTCCAGCTTGCGCAACCGCCCGCTG
CCGCACGACCTGCTGGTGTTCGGCGAGGTCGGGCTGTCCGGCGAGGTGCGTCCGGTGCCGAGCGGCCAGGAG
CGCCTGAAGGAAGCCGGCAAGCATGGTTTCAAGCGTGCCATCGTACCCCTCGGCAACGCGCCGAAGGAGGCG
CCGGCGGGATTGCAGGTGATCGCCGTGACGCGCCTCGAGCAGGCCCTGGACGCCCTCTTCGAGTGA
Translation:
MAKAKRMYGCTECGATFPKWAGQCADCGAWNTLVETVVEAAPSGSGRGGWAGQQANLKTLAEVSVEEMPRFT
TGSTELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNLASRVPALYVTGEESQQQVAMRARRLSLPEDK
LKVMTETSIETIIATARQEQPRVMVIDSIQTIFTEQLQSAPGGVAQVRESAAMLVRYAKQSGTAIFLVGHVT
KEGALAGPRVLEHMVDTVLYFEGESDGRLRLLRAVKNRFGAVNELGVFGMTDKGLKEVSNPSAIFLTRAQEA
VPGSVVMATWEGSRPMLVEVQALVDTSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTYDQDVFLNVVGGV
KVLETASDLALMAAVMSSLRNRPLPHDLLVFGEVGLSGEVRPVPSGQERLKEAGKHGFKRAIVPLGNAPKEA
PAGLQVIAVTRLEQALDALFE*
AnnotationID:1139 GeneID:1130
Modification Date/Time:
2005-05-06 07:07:18
GeneProduct: DNA repair protein RadA
Cell Localization Confidence Code: 5
Functional Category: (11) DNA replication, recombination, modification and repair
Alternate Gene Product Name:
Functional Category Confidence Code: 5
Secondary Functional Category(ies):
Homology: >gb|AAO58086.1| (AE016872) DNA repair protein RadA [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 455
Score = 814 bits (2102), Expect = 0.0
Identities = 413/455 (90%), Positives = 435/455 (95%), Gaps = 2/455 (0%)
>dbj|BAB38770.1| (AP002569) probable ATP-dependent protease [Escherichia coli
O157:H7]
Length = 460
Score = 573 bits (1477), Expect = e-163
Identities = 287/455 (63%), Positives = 358/455 (78%), Gaps = 8/455 (1%)
Structural Features: COG1066 , Sms, Predicted ATP-dependent serine protease
[Posttranslational modification, protein turnover, chaperones]
CD-Length = 456 residues, 99.8% aligned
Score = 666 bits (1719), Expect = 0.0
Identities = 282/457 (61%), Positives = 346/457 (75%), Gaps = 6/457 (1%)
ReferenceID:33287
Author/Investigator(s):
Sargentini NJ, Smith KC.
Title:
Quantitation of the involvement of the recA, recB, recC, recF, recJ, recN, lexA, radA, radB, uvrD, and umuC genes in the repair of X-ray-induced DNA double-strand breaks in Escherichia coli.
Source: Radiat Res. 1986 Jul;107(1):58-72.