ViewGene

Locus Name:
GeneID:
Location:

GeneID:1067
TrivialName: PA14_19320
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_19320
PAO1 Ortholog Locus:PA3464
Sequence Length:1326
Protein Length:441
Start: 1665661
Stop: 1666986
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG06852.1|AE004767_3 (AE004767) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 436/441 (98%), Positives = 439/441 (99%)
Sequence:
ATGAAGTTGCTGTTGCGTTGCCTGCTGCTGGGGGCGTGGGTCGTCTCGCCGAGCCTGTGGGCCTGGTCCAAC
CATACGGTGGGCAGCTACCTGGCATTACGCGAGCTGGCGGCCATCCGCGAGGCGCCGGAAGTCGAGGTGGAG
CCGCTGGAGGCGTTCCTCGCCGCCGAGCGCGGCGGACTGGCCGCCCTGCTGGATGAGCAGGAAGCCTACGCC
CGTGCGCATATCGGCAACTACCCGGCGCGTCCGGACGCCCTGCGCTTCGCCGCCGACGGCGAGGCCGGCGAC
TTGCGCCAGGCGTTCCTCGCGGCGCTGCGGGTCAACCCGGAGATCCGCCTGGCGCTGGCGATCCAGCCGCTT
CCCGGGCAGGACCAGCCGCAGCGCCCGCACCTCAAGCCACAGGAGGTGCTGGTGTTCCAGAACCTCTCGCCG
TGGACCGCCTGGCGTTTCATCCGCCTGGAGCCCGGCGAGCGAGTCGCGCCCCTGGCAGTGCTGGCCACCGCC
GCCGACGAACCGGACTACGGCCACGACATCAACCTGTTCAGCGACAACCCCGGCGAGGCCGGCCAGCGCTAC
GGCTTCGGCACCCAGCCATTCGGCGACCCGCGCTTCGAGTTCAGCTCCCAGGCGCCGTTCCACATGGGCTTC
TACCACGAGGCGGCGGTGATCTACAGCGGCGCGCCGTTCCTCGCCCGGGCCTGGCCGGAATGGCGTGCCTAC
CAGTACTTCGGCCTGTCCCGCTTCGCCTTCGCCAACGGTCATCCCTACTGGGGCTACCGGTTCCTTGGCTGG
GGCATGCACTACATCCAGGACATCACCCAGCCCTACCACTCCACGCCGCTGCCCGGTGCCAGCCTGGCGGCG
ATGCTACAGATGGAGGGCAAGGCATTGCTCGGCTACCCGGAGGAAAAGCAGGCGGCCATCGAGCGTGTCGCG
AACCGCCATACCGCGGTGGAGAAATACCAGTTCGACTGGCTGCGCCAACTGCTCCGCGACGGCCGCCCGCAG
CCGATGCTCGACGCCTACGCCGACACCCGCCGCGACGGTGCCTATCCGGCCTATTCGCCGACCTACTTGCGC
GAGGTGGTGGCCGCCGAGTCGAACGCCCACGCCGCGGCCTTCGACGCCGCCATCGGCGAATGGCTGGCCGCC
CGCCCGGCCTTCGCCGCGCAGGACTTCAGCGAGAGCAACCAGCCACGCCCCGAGGCCCACGACAATGCGGTG
CTGAACGCGCAACTGATCGAGCTGATCGGGCATTTCGGCGCGCATAGCCGGAACATCGCCAGGGCGGCGTTG
GAGACGGAGGAGGGTGAGGCGAAGGAGTGA
Translation:
MKLLLRCLLLGAWVVSPSLWAWSNHTVGSYLALRELAAIREAPEVEVEPLEAFLAAERGGLAALLDEQEAYA
RAHIGNYPARPDALRFAADGEAGDLRQAFLAALRVNPEIRLALAIQPLPGQDQPQRPHLKPQEVLVFQNLSP
WTAWRFIRLEPGERVAPLAVLATAADEPDYGHDINLFSDNPGEAGQRYGFGTQPFGDPRFEFSSQAPFHMGF
YHEAAVIYSGAPFLARAWPEWRAYQYFGLSRFAFANGHPYWGYRFLGWGMHYIQDITQPYHSTPLPGASLAA
MLQMEGKALLGYPEEKQAAIERVANRHTAVEKYQFDWLRQLLRDGRPQPMLDAYADTRRDGAYPAYSPTYLR
EVVAAESNAHAAAFDAAIGEWLAARPAFAAQDFSESNQPRPEAHDNAVLNAQLIELIGHFGAHSRNIARAAL
ETEEGEAKE*
AnnotationID:1076GeneID:1067
AnnotatorUID: diggins
Modification Date/Time: 2005-04-18 21:09:25
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:PA3464
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:2137
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:19279
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
ReferenceID:32094
Author/Investigator(s):
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:Misc (text/plain)
Data:1067_cdd.html
URL:
Homologs By Global Alignment
Gene ID:1067

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
1924 PA3464_tr translation of PA3464 441 98.86 99.54 0 2315.0
66004 gb|AAG06852.1|AE004767_3 (AE004767) hypothetical protein PA3464 [Pseudomonas aeruginosa PAO1] 441 98.86 99.54 0 2315.0
GC ORFID: 44069How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA3464Glimmer Score:
Start: 3288271Stop: 3286946
Length: 1326
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: t_PA3464 translation of PA3464Homolog Bit Score 896.0
Other Homologs: t_PA3464 (ORF: GLIMMER)
GC ORF Sequence
ATGAAGTTGCTGTTGCGTTGCCTGCTGCTGGGGGCGTGGGTCGTCTCGCCGAGCCTGTGGGCCTGGTCCAAC
CATACGGTGGGCAGCTACCTGGCATTACGCGAGCTGGCGGCCATCCGCGAGGCGCCGGAAGTCGAGGTGGAG
CCGCTGGAGGCGTTCCTCGCCGCCGAGCGCGGCGGACTGGCCGCCCTGCTGGATGAGCAGGAAGCCTACGCC
CGTGCGCATATCGGCAACTACCCGGCGCGTCCGGACGCCCTGCGCTTCGCCGCCGACGGCGAGGCCGGCGAC
TTGCGCCAGGCGTTCCTCGCGGCGCTGCGGGTCAACCCGGAGATCCGCCTGGCGCTGGCGATCCAGCCGCTT
CCCGGGCAGGACCAGCCGCAGCGCCCGCACCTCAAGCCACAGGAGGTGCTGGTGTTCCAGAACCTCTCGCCG
TGGACCGCCTGGCGTTTCATCCGCCTGGAGCCCGGCGAGCGAGTCGCGCCCCTGGCAGTGCTGGCCACCGCC
GCCGACGAACCGGACTACGGCCACGACATCAACCTGTTCAGCGACAACCCCGGCGAGGCCGGCCAGCGCTAC
GGCTTCGGCACCCAGCCATTCGGCGACCCGCGCTTCGAGTTCAGCTCCCAGGCGCCGTTCCACATGGGCTTC
TACCACGAGGCGGCGGTGATCTACAGCGGCGCGCCGTTCCTCGCCCGGGCCTGGCCGGAATGGCGTGCCTAC
CAGTACTTCGGCCTGTCCCGCTTCGCCTTCGCCAACGGTCATCCCTACTGGGGCTACCGGTTCCTTGGCTGG
GGCATGCACTACATCCAGGACATCACCCAGCCCTACCACTCCACGCCGCTGCCCGGTGCCAGCCTGGCGGCG
ATGCTACAGATGGAGGGCAAGGCATTGCTCGGCTACCCGGAGGAAAAGCAGGCGGCCATCGAGCGTGTCGCG
AACCGCCATACCGCGGTGGAGAAATACCAGTTCGACTGGCTGCGCCAACTGCTCCGCGACGGCCGCCCGCAG
CCGATGCTCGACGCCTACGCCGACACCCGCCGCGACGGTGCCTATCCGGCCTATTCGCCGACCTACTTGCGC
GAGGTGGTGGCCGCCGAGTCGAACGCCCACGCCGCGGCCTTCGACGCCGCCATCGGCGAATGGCTGGCCGCC
CGCCCGGCCTTCGCCGCGCAGGACTTCAGCGAGAGCAACCAGCCACGCCCCGAGGCCCACGACAATGCGGTG
CTGAACGCGCAACTGATCGAGCTGATCGGGCATTTCGGCGCGCATAGCCGGAACATCGCCAGGGCGGCGTTG
GAGACGGAGGAGGGTGAGGCGAAGGAGTGA