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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG06855.1|AE004767_6 (AE004767) probable MFS transporter [Pseudomonas aeruginosa PAO1]
Identities = 453/455 (99%), Positives = 454/455 (99%)
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Sequence:
ATGCCCGACGCGCCCGCATCCGCCGCCGAACGCCTCGAACGGCTGCCGCTGAGTCCGTATCACCGACTGATC
TTCGTGATCATCGCGCTGGCGTTCTTCTTCGACTCAATGGACCTGGCGATGATGACCTTCCTGCTCGGCTCG
ATCAAAGCCGAGTTCGGGCTCGACTCGGCGCAGGCCGGGCTGCTGGCCAGCTCGAGCTTCTTCGGCATGGTG
ATCGGCGCGGCCCTGTCGGGCATGCTCGCCGACCGCTTCGGGCGCAAGCCGGTATTCCAGGCCAGCATCGTG
CTCTGGGGCCTGGCCAGCTACCTGTGCTCCACCGCCGGCGACCTCGGCAGCCTGACCTTCTACCGGGTATTG
CTGGGGATCGGCATGGGGATGGAGTTTCCCATCGCCCAGTCGCTGCTGTCGGAGATGATCCCGGCCAGCCGC
CGCGGCAAGTACATTGCGCTGATGGACGGCTTCTGGCCGCTGGGCTTCGTCGCCGCCGGCTGCCTGTCCTAC
TTCCTCCTGCCGCTGACCGGCTGGCGCAGCATTTTCCTGGTGCTGGCGCTGCCGGCGGTGTTCGTCCTCGCC
ATCCGCTTCCTGATTCCCGAGTCGCCGCGCTGGCTGGAGCAGGCCGGCCGGCGCGAACAGGCGGACCGGGTA
TTGCGCGACATAGAAGCACGGGTGATGCGTTCGCTGGGCCTGACCGAGCTGCCGCCGCCGCTGCGCCAGCCG
CAGCGGGAACGCAGCCGTCCGGGCTTCTTCAGCGCCTTCGCCGAACTCTGGTCGCCAGCCTACCGGCGCCGC
ACCCTGACCGTCTGGGGCCTGTGGTTCTTCGCCCTGCTCGGTTTCTACGGCCTGACCTCCTGGCTCAGCGCG
CTGCTCCAGCAATCCGGCTTCGCCGTCACCCAGTCGGTGTACTACACGGTGCTGATCTCGCTGGCCGGGATA
CCCGGCTTCCTCTGCGCGGCCTGGCTGGTGGAAAGCTGGGGCCGCAAGCCGAGCTGCGTGCTGATGCTCCTC
GGCGGCGGCGCGATGGCCTACGCCTACGGCCAGACCGCGGTGTTCGGCGGCAGCCTGGCGCTGCTGATCGGC
TTCGGCCTGGCCATGCAGTTCTTCCTGTTCGGCATGTGGGCGGTGCTCTACACCTATACGCCGGAACTCTAT
CCGACCTCCGCGCGCGCCACCGGCTCGGGCTTCGCCTCGGCGGTCGGGCGAATCGGCTCGCTGCTCGGCCCG
CTGGTCACCGGGCTGGTCCTGCCGCTCACCGGCCAGGGCGGGGTGTTCACCCTCGGCGCCCTCTGTTTCGGC
GTCGCCGCCCTGGTGGTCTGGGCCTTCGGCATCGAGACCCGCGGGCGCACCCTGGAGGAGCTTGCCGGCTGA
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Translation:
MPDAPASAAERLERLPLSPYHRLIFVIIALAFFFDSMDLAMMTFLLGSIKAEFGLDSAQAGLLASSSFFGMV
IGAALSGMLADRFGRKPVFQASIVLWGLASYLCSTAGDLGSLTFYRVLLGIGMGMEFPIAQSLLSEMIPASR
RGKYIALMDGFWPLGFVAAGCLSYFLLPLTGWRSIFLVLALPAVFVLAIRFLIPESPRWLEQAGRREQADRV
LRDIEARVMRSLGLTELPPPLRQPQRERSRPGFFSAFAELWSPAYRRRTLTVWGLWFFALLGFYGLTSWLSA
LLQQSGFAVTQSVYYTVLISLAGIPGFLCAAWLVESWGRKPSCVLMLLGGGAMAYAYGQTAVFGGSLALLIG
FGLAMQFFLFGMWAVLYTYTPELYPTSARATGSGFASAVGRIGSLLGPLVTGLVLPLTGQGGVFTLGALCFG
VAALVVWAFGIETRGRTLEELAG* |
AnnotationID:1064 | GeneID:1055 |
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Modification Date/Time: |
2005-04-19 09:09:01 |
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GeneProduct: | putative MFS transporter |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (27) Transport of small molecules |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >emb|CAD17203.1| (AL646076) PROBABLE METABOLITE TRANSPORT TRANSMEMBRANE PROTEIN
[Ralstonia solanacearum]
Length = 476
Score = 659 bits (1701), Expect = 0.0
Identities = 326/453 (71%), Positives = 378/453 (83%), Gaps = 6/453 (1%)
>gb|AAN25179.1|AE014767_10 (AE014767) probable sugar transporter [Bifidobacterium longum
NCC2705]
Length = 449
Score = 294 bits (753), Expect = 7e-79
Identities = 163/461 (35%), Positives = 263/461 (57%), Gaps = 27/461 (5%)
>dbj|BAC19624.1| (AP005223) putative transport protein [Corynebacterium efficiens
YS-314]
Length = 480
Score = 284 bits (726), Expect = 9e-76
Identities = 151/446 (33%), Positives = 247/446 (55%), Gaps = 16/446 (3%) |
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Structural Features: | pfam00083, Sugar_tr, Sugar (and other) transporter.
CD-Length = 448 residues, 98.9% aligned
Score = 175 bits (445), Expect = 1e-44
Identities = 117/449 (26%), Positives = 189/449 (42%), Gaps = 23/449 (5%)
COG2814, AraJ, Arabinose efflux permease
[Carbohydrate transport and metabolism]
CD-Length = 394 residues, 94.9% aligned
Score = 89.5 bits (222), Expect = 8e-19
Identities = 96/421 (22%), Positives = 155/421 (36%), Gaps = 48/421 (11%) |
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