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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG07151.1|AE004795_3 (AE004795) conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 451/452 (99%), Positives = 451/452 (99%), Gaps = 1/452 (0%)
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Sequence:
GTGCAGAAGGAGGGCGTACTGCGCGTGATCACCCGCAACAGCCCGGCCACCTACTTCCAGGACCGCAACGGC
GAAACCGGCTTCGAATACGAACTGGCCAAGCGCTTCGCCGAGCGTCTCGGCGTCGAGCTGAAGATCGAGACC
GCCGACAACCTCGACGACCTCTATGCCCAGCTTTCCCGCGAGGGCGGCCCGGCGCTCGCCGCGGCCGGCCTG
ACCCCGGGACGCGAAGACGACGCCAGCGTGCGCTACTCGCACACCTACCTCGACGTCACCCCGCAGATAATC
TACCGCAACGGCCAGCAGCGCCCGACCCGCCCGGAAGACCTGGTCGGCAAGCGCATCATGGTGCTCAAGGGC
AGCAGCCACGCGGAGCAGCTCGCCGAGCTGAAGAAGCAGTATCCCGAACTGAAGTACGAAGAATCCGATGCT
GTCGAAGTGGTCGACCTGTTGCGCATGGTCGACGTCGGCGACATCGACCTGACCCTGGTCGACTCCAACGAA
CTGGCGATGAACCAGGTGTACTTCCCCAACGTCCGCGTCGCCTTCGACTTCGGCGAAGCCCGCGGGCTGGCC
TGGGCCTTGCCGGGGGGCGACGACAGCCTGATGAACGAGGTCAACGCGTTCCTCGACCAGGCCAAGAAGGAA
GGGCTGCTGCAACGCCTGAAGGACCGTTACTACGGGCATGTCGACGTACTCGGCTACGTCGGCGCCTACACC
TTCGCCCAGCACCTGCAGCAACGCCTGCCGCGCTACGAAAGCCACTTCAAGCAGAGCGGCAAGCAGTTGGAT
ACCGACTGGCGCCTGCTCGCCGCCATCGGCTACCAGGAATCGCTGTGGCAGCCCGGCGCCACCTCCAAGACC
GGCGTGCGCGGCCTGATGATGCTGACCAACCGCACCGCCCAGGCGATGGGGGTGTCCAACCGGCTCGACCCG
AAGCAGAGCATCCAGGGCGGCAGCAAGTATTTCGTGCAGATCCGCAGCGAACTGCCCGAGAGCATCAAGGAA
CCGGACCGCAGCTGGTTCGCCCTGGCCGCCTACAACATCGGCGGCGCGCACCTGGAAGACGCGCGCAAGATG
GCCGAGAAGGAAGGCCTCAACCCGAACAAGTGGCTGGACGTGAAGAAGATGCTGCCGCGCCTGGCGCAGAAG
CAGTGGTACGCCAAGACCCGCTACGGCTATGCGCGCGGCGGCGAGACCGTGCACTTCGTACAGAACGTGCGG
CGCTACTACGACATCCTCACCTGGGTGACCCAGCCGCAGATGGAAGGCAGCCAGATCGCCGAGAGCGGGTTG
CACCTGCCCGGCGTGAACAAGACGCGCCCGGAAGAAGACAGCGGCGACGAGAAACTCTAG |
Translation:
MQKEGVLRVITRNSPATYFQDRNGETGFEYELAKRFAERLGVELKIETADNLDDLYAQLSREGGPALAAAGL
TPGREDDASVRYSHTYLDVTPQIIYRNGQQRPTRPEDLVGKRIMVLKGSSHAEQLAELKKQYPELKYEESDA
VEVVDLLRMVDVGDIDLTLVDSNELAMNQVYFPNVRVAFDFGEARGLAWALPGGDDSLMNEVNAFLDQAKKE
GLLQRLKDRYYGHVDVLGYVGAYTFAQHLQQRLPRYESHFKQSGKQLDTDWRLLAAIGYQESLWQPGATSKT
GVRGLMMLTNRTAQAMGVSNRLDPKQSIQGGSKYFVQIRSELPESIKEPDRSWFALAAYNIGGAHLEDARKM
AEKEGLNPNKWLDVKKMLPRLAQKQWYAKTRYGYARGGETVHFVQNVRRYYDILTWVTQPQMEGSQIAESGL
HLPGVNKTRPEEDSGDEKL* |
AnnotationID:1048 | GeneID:1039 |
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Modification Date/Time: |
2005-04-22 12:12:27 |
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GeneProduct: | putative periplasmic binding transport protein |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (27) Transport of small molecules |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAN66661.1|AE016294_3 (AE016777) periplasmic binding domain/transglycosylase SLT domain
fusion protein [Pseudomonas putida KT2440]
Length = 449
Score = 701 bits (1809), Expect = 0.0
Identities = 341/447 (76%), Positives = 385/447 (86%), Gaps = 2/447 (0%)
>gb|AAM84882.1|AE013733_3 (AE013733) putative periplasmic binding transport protein [Yersinia
pestis KIM]
Length = 517
Score = 321 bits (822), Expect = 7e-87
Identities = 179/412 (43%), Positives = 248/412 (60%), Gaps = 6/412 (1%) |
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Structural Features: | COG4623, Predicted soluble lytic transglycosylase fused to
an ABC-type
amino acid-binding protein
CD-Length = 473 residues, 95.6% aligned
Score = 603 bits (1557), Expect = 2e-173
Identities = 220/455 (48%), Positives = 295/455 (64%), Gaps = 7/455 (1%)
smart00062, PBPb, Bacterial periplasmic substrate-binding
proteins
CD-Length = 222 residues, 99.5% aligned
Score = 113 bits (284), Expect = 9e-26
Identities = 58/229 (25%), Positives = 108/229 (47%), Gaps = 13/229 (5%)
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