ViewGene
Locus Name:
GeneID:
Location:

GeneID:1000
TrivialName: PA14_45050
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_45050
PAO1 Ortholog Locus:PA1498
Sequence Length:1434
Protein Length:477
Start: 4017320
Stop: 4018753
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG04887.1|AE004578_9 (AE004578) pyruvate kinase I [Pseudomonas aeruginosa PAO1]
Identities = 475/477 (99%), Positives = 475/477 (99%)
Sequence:
ATGACAGCCGACAAGAAAGCCAAGATCCTCGCCACCCTCGGCCCGGCCACCCGCAGCCGCGACGATATCCGT
GCCCTGGTGGAGGCCGGCGCCAACCTGTTCCGCCTGAACTTCAGCCACGGCGACTACGCCGATCACGCGCAG
CGCTTCGCCTGGGTGCGCGAGGTGGAAGCGGAACTGAACTACCCGATCGGCGTGCTCATGGACCTGCAGGGT
CCGAAGCTGCGGGTCGGCCGCTTCGCCGCCGGTGCCGTGCAATTGCAGCGCGGGCAGACCTTCACCCTCGAC
CTCAGCGACGCCCCCGGTGACGAGCGGCGGGTCAACCTGCCGCATCCGGAGATCATCCATGCCCTGGAGCCG
GGTATGAGCCTGCTGCTGGACGACGGCAAGATCCGCCTGGAAGTGGTCAACGGCCACAGCGACGCCATCGAG
ACCCGCGTGGCGGTGGGTGGCGAGCTGTCCGATCGCAAGGGCGTCAACGTGCCGGAAGCGGTGCTGCAACTC
AGCCCGCTGACCGACAAGGACCGCCGCGACCTGGCCTTCGGCCTGGAACTGGGGGTCGACTGGGTGGCGCTG
TCCTTCGTGCAACGCCCGGAGGACATCGACGAGGCCCGTGGGCTGATCGGCGACAAGGCCTTCCTCATGGCT
AAGATCGAGAAGCCCAGCGCGGTGAGCGCCATCGAGGCGATCGCCGAGCGCGCCGACGCGATCATGGTGGCG
CGCGGCGACCTCGGCGTAGAGGTGCCGGCGGAGAGCGTGCCGGGCATCCAGAAACGCATCGTCCAGGTCTGC
CGCCAGCTCGGCAAGCCGGTGGTGGTGGCTACCCAGATGCTCGAGTCGATGCGCTtcTCCCCCGCCCCGACC
CGCGCCGAGGTGACCGACGTAGCCACCGCGGTGGGCGCCGGCGCCGACGCGGTGATGCTCTCGGCGGAAACC
GCTTCCGGACAATACCCTCGCGAGGCGGTAGAGATGATGGCGAAGATCGTCCGTCAGGTGGAGGCCGAGCCG
GACTACCACGTCCAGCtcgAGGTCAACCGTCCGCAGCCCGACGCTACCGTCTCCGATGCGATCAGCTGCGCG
ATCCGCCGGGTCAGCCGGATCCTCCCGGTGGCGGTGCTGGTGAACTACACCGAGTCGGGCAACTCGACCCTG
CGCGCCGCCCGCGAGCGGCCCAAGGCGCCGATCCTCAGCCTGACCCCGAACCTGCGTACCGCGCGGCGACTG
ACCGTGGCCTGGGGCGTGTATTCGGTGGTCAACGAGCAACTGGCGCACGTCGACGAGATCTGCTCGACCGCC
CTCGACATCGCCCTGGCCCAGCGTATGGCGCGCCGCGGCGACACCGTGGTGGTCACCGCCGGCGTGCCGTTC
GGTCGCCCCGGCTCGACCAACATGCTGCGCATCGAGACCGTGGCGCCGCCGCTGGGAGATCTCTGA
Translation:
MTADKKAKILATLGPATRSRDDIRALVEAGANLFRLNFSHGDYADHAQRFAWVREVEAELNYPIGVLMDLQG
PKLRVGRFAAGAVQLQRGQTFTLDLSDAPGDERRVNLPHPEIIHALEPGMSLLLDDGKIRLEVVNGHSDAIE
TRVAVGGELSDRKGVNVPEAVLQLSPLTDKDRRDLAFGLELGVDWVALSFVQRPEDIDEARGLIGDKAFLMA
KIEKPSAVSAIEAIAERADAIMVARGDLGVEVPAESVPGIQKRIVQVCRQLGKPVVVATQMLESMRFSPAPT
RAEVTDVATAVGAGADAVMLSAETASGQYPREAVEMMAKIVRQVEAEPDYHVQLEVNRPQPDATVSDAISCA
IRRVSRILPVAVLVNYTESGNSTLRAARERPKAPILSLTPNLRTARRLTVAWGVYSVVNEQLAHVDEICSTA
LDIALAQRMARRGDTVVVTAGVPFGRPGSTNMLRIETVAPPLGDL*
AnnotationID:1009GeneID:1000
AnnotatorUID: urbach
Modification Date/Time: 2003-11-27 21:09:17
Gene Name:pykF
Confidence Code:2
GeneProduct:pyruvate kinase I
Cell Localization:()
Synonyms:Phosphoenolpyruvate kinase
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(12) Energy metabolism
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:






   
Genomic Context:






   
Comment:


















    ReferenceID:2003




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:19145




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









           
Homologs By Global Alignment 

           

       



     
Gene ID:1000
           
Identity:

                               
                                   0%
                               
                                   10%
                               
                                   20%
                               
                                   30%
                               
                                   40%
                               
                                   50%
                               
                                   60%
                               
                                   70%
                               
                                   80%
                               
                                   90%
                               
                                   100%
                               
                             

                           

     
HomologID
                           Accession
                           Description
                           Length
                           PctIdentity
                           PctSimilarity
                           Gaps
                           Score
     

     
     
1800
                           PA1498_tr
                           translation of PA1498
                           477
                           99.58
                           99.58
                           0
                           2370.0
     

     
     
62803
                           gb|AAG04887.1|AE004578_9
                           (AE004578) pyruvate kinase I [Pseudomonas aeruginosa PAO1]
                           477
                           99.58
                           99.58
                           0
                           2370.0
     

     
     
62804
                           gb|AAN69881.1|AE016627_3
                           (AE016790) pyruvate kinase I [Pseudomonas putida KT2440]
                           477
                           77.98
                           86.16
                           6
                           1882.0
     

     
     
62805
                           emb|CAD18599.1|
                           (AL646084) PROBABLE PYRUVATE KINASE II PROTEIN [Ralstonia solanacearum]
                           478
                           58.36
                           70.92
                           7
                           1364.0
     

     
     
62806
                           emb|CAC47368.1|
                           (AL591791) PROBABLE PYRUVATE KINASE II PROTEIN [Sinorhizobium meliloti]
                           480
                           53.75
                           68.75
                           4
                           1254.0
     

     






      

          
GC ORFID: 44002How Found: BLASTX

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: t_PA1498Glimmer Score: 

          
Start: 936589Stop: 935156

          
Length: 1434


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: t_PA1498 translation of PA1498Homolog Bit Score 917.0

          
Other Homologs:  t_PA1498 (ORF: GLIMMER)

          
GC ORF Sequence

           
ATGACAGCCGACAAGAAAGCCAAGATCCTCGCCACCCTCGGCCCGGCCACCCGCAGCCGCGACGATATCCGT 
GCCCTGGTGGAGGCCGGCGCCAACCTGTTCCGCCTGAACTTCAGCCACGGCGACTACGCCGATCACGCGCAG 
CGCTTCGCCTGGGTGCGCGAGGTGGAAGCGGAACTGAACTACCCGATCGGCGTGCTCATGGACCTGCAGGGT 
CCGAAGCTGCGGGTCGGCCGCTTCGCCGCCGGTGCCGTGCAATTGCAGCGCGGGCAGACCTTCACCCTCGAC 
CTCAGCGACGCCCCCGGTGACGAGCGGCGGGTCAACCTGCCGCATCCGGAGATCATCCATGCCCTGGAGCCG 
GGTATGAGCCTGCTGCTGGACGACGGCAAGATCCGCCTGGAAGTGGTCAACGGCCACAGCGACGCCATCGAG 
ACCCGCGTGGCGGTGGGTGGCGAGCTGTCCGATCGCAAGGGCGTCAACGTGCCGGAAGCGGTGCTGCAACTC 
AGCCCGCTGACCGACAAGGACCGCCGCGACCTGGCCTTCGGCCTGGAACTGGGGGTCGACTGGGTGGCGCTG 
TCCTTCGTGCAACGCCCGGAGGACATCGACGAGGCCCGTGGGCTGATCGGCGACAAGGCCTTCCTCATGGCT 
AAGATCGAGAAGCCCAGCGCGGTGAGCGCCATCGAGGCGATCGCCGAGCGCGCCGACGCGATCATGGTGGCG 
CGCGGCGACCTCGGCGTAGAGGTGCCGGCGGAGAGCGTGCCGGGCATCCAGAAACGCATCGTCCAGGTCTGC 
CGCCAGCTCGGCAAGCCGGTGGTGGTGGCTACCCAGATGCTCGAGTCGATGCGCTtcTCCCCCGCCCCGACC 
CGCGCCGAGGTGACCGACGTAGCCACCGCGGTGGGCGCCGGCGCCGACGCGGTGATGCTCTCGGCGGAAACC 
GCTTCCGGACAATACCCTCGCGAGGCGGTAGAGATGATGGCGAAGATCGTCCGTCAGGTGGAGGCCGAGCCG 
GACTACCACGTCCAGCtcgAGGTCAACCGTCCGCAGCCCGACGCTACCGTCTCCGATGCGATCAGCTGCGCG 
ATCCGCCGGGTCAGCCGGATCCTCCCGGTGGCGGTGCTGGTGAACTACACCGAGTCGGGCAACTCGACCCTG 
CGCGCCGCCCGCGAGCGGCCCAAGGCGCCGATCCTCAGCCTGACCCCGAACCTGCGTACCGCGCGGCGACTG 
ACCGTGGCCTGGGGCGTGTATTCGGTGGTCAACGAGCAACTGGCGCACGTCGACGAGATCTGCTCGACCGCC 
CTCGACATCGCCCTGGCCCAGCGTATGGCGCGCCGCGGCGACACCGTGGTGGTCACCGCCGGCGTGCCGTTC 
GGTCGCCCCGGCTCGACCAACATGCTGCGCATCGAGACCGTGGCGCCGCCGCTGGGAGATCTCTGA