BLAST Search Results

BLASTP 2.2.6 [Apr-09-2003]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: gbbct 
           559,965 sequences; 168,382,221 total letters



Query= 174
         (806 letters)

Distribution of 100 Blast Hits on the Query Sequence



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG03394.1|AE004440_4  (AE004440) DNA gyrase subunit B [P...  1601   0.0   
dbj|BAA85765.1|  (AB005881) DNA gyrase subunit B [Pseudomona...  1575   0.0   
gb|AAO53561.1|  (AE016856) DNA gyrase, subunit B [Pseudomona...  1416   0.0   
gb|AAN65647.1|AE016191_4  (AE016774) DNA gyrase, subunit B [...  1388   0.0   
emb|CAA38447.1|  (X54631) unnamed protein product [Pseudomon...  1385   0.0   
gb|AAN53098.1|AE015452_11  (AE015452) DNA gyrase, B subunit ...  1145   0.0   
dbj|BAC16536.1|  (AB092340) DNA topoisomerase chain B [Shewa...  1129   0.0   
gb|AAN83054.1|AE016769_169  (AE016769) DNA gyrase subunit B ...  1127   0.0   
gb|AAM87652.1|AE014012_9  (AE014012) DNA gyrase subunit B, t...  1127   0.0   
emb|CAC93544.1|  (AJ414160) DNA gyrase subunit B [Yersinia p...  1127   0.0   
gb|AAP18989.1|  (AE016991) DNA gyrase subunit B, type II top...  1125   0.0   
gb|AAN45208.1|AE015383_8  (AE015383) DNA gyrase subunit B Gy...  1125   0.0   
emb|CAA27871.1|  (X04341) unnamed protein product [Escherich...  1125   0.0   
dbj|BAB38057.1|  (AP002566) DNA gyrase subunit B GyrB [Esche...  1125   0.0   
emb|CAA69221.1|  (Y07916) subunit B of DNA gyrase [Salmonell...  1124   0.0   
gb|AAC76722.1|  (AE000447) DNA gyrase subunit B, type II top...  1124   0.0   
emb|CAA69665.1|  (Y08383) subunit B of DNA gyrase [Salmonell...  1122   0.0   
gb|AAA62050.1|  (L10328) DNA gyrase, subunit B [Escherichia ...  1121   0.0   
gb|AAG58896.1|AE005601_2  (AE005601) DNA gyrase subunit B, t...  1121   0.0   
gb|AAL22694.1|  (AE008878) DNA gyrase, subunit B [Salmonella...  1120   0.0   
gb|AAO71180.1|  (AE016846) DNA gyrase subunit B [Salmonella ...  1120   0.0   
emb|CAD03160.1|  (AL627280) DNA gyrase subunit B [Salmonella...  1120   0.0   
dbj|BAA20341.1|  (D87842) DNA gyrase subunit B [Escherichia ...  1119   0.0   
gb|AAF93193.1|  (AE004093) DNA gyrase, subunit B [Vibrio cho...  1119   0.0   
gb|AAO09485.1|AE016800_90  (AE016800) DNA gyrase, subunit B ...  1115   0.0   
gb|AAK03560.1|  (AE006184) GyrB [Pasteurella multocida]          1110   0.0   
dbj|BAC58277.1|  (AP005073) DNA gyrase, subunit B [Vibrio pa...  1103   0.0   
gb|AAC22225.1|  (U32738) DNA gyrase, subunit B (gyrB) [Haemo...  1077   0.0   
gb|AAP96417.1|  (AE017155) DNA gyrase subunit B; Type II top...  1067   0.0   
gb|AAO89574.1|  (AE016960) DNA gyrase, B subunit [Coxiella b...  1054   0.0   
gb|AAM39323.1|  (AE012093) DNA gyrase subunit B [Xanthomonas...   941   0.0   
dbj|BAC24162.1|  (AB063521) gyrB [Wigglesworthia brevipalpis...   936   0.0   
gb|AAC34893.1|  (AF085684) DNA gyrase B subunit [Methylovoru...   934   0.0   
emb|CAD16937.1|  (AL646075) PROBABLE DNA GYRASE (SUBUNIT B) ...   932   0.0   
emb|CAD83914.1|  (BX321856) DNA gyrase, subunit B:DNA topois...   932   0.0   
gb|AAM34896.1|  (AE011623) DNA gyrase subunit B [Xanthomonas...   931   0.0   
emb|CAD83545.1|  (BX248584) DNA gyrase subunit B [Candidatus...   924   0.0   
gb|AAF82818.1|AE003855_5  (AE003855) DNA gyrase subunit B [X...   916   0.0   
gb|AAO27913.1|  (AE012553) DNA gyrase subunit B [Xylella fas...   911   0.0   
gb|AAC38108.1|  (AF008210) DNA gyrase subunit B [Buchnera ap...   910   0.0   
gb|AAM67582.1|  (AE014076) DNA gyrase subunit B [Buchnera ap...   910   0.0   
dbj|BAB12738.1|  (AP001118) DNA gyrase subunit B [Buchnera a...   910   0.0   
emb|CAB57885.1|  (AJ249849) DNA gyrase B subunit [Photobacte...   905   0.0   
emb|CAE39678.1|  (BX640436) DNA gyrase subunit B [Bordetella...   902   0.0   
emb|CAE44818.1|  (BX640412) DNA gyrase subunit B [Bordetella...   902   0.0   
emb|CAE35351.1|  (BX640452) DNA gyrase subunit B [Bordetella...   902   0.0   
gb|AAO26754.1|  (AE014016) putative DNA gyrase subunit b [Bu...   900   0.0   
gb|AAF40668.1|  (AE002378) DNA gyrase subunit B [Neisseria m...   894   0.0   
emb|CAB57876.1|  (AJ249850) DNA gyrase B subunit [Photobacte...   893   0.0   
emb|CAB83373.1|  (AL162752) DNA gyrase subunit B [Neisseria ...   887   0.0   
emb|CAC41399.1|  (AL591782) PROBABLE DNA GYRASE SUBUNIT B PR...   878   0.0   
gb|AAL41043.1|  (AE008975) DNA gyrase subunit B [Agrobacteri...   865   0.0   
gb|AAK85837.1|  (AE007943) AGR_C_19p [Agrobacterium tumefaci...   865   0.0   
gb|AAA88327.1|  (M59981) DNA gyrase [Neisseria gonorrhoeae]       844   0.0   
gb|AAN29081.1|AE014327_2  (AE014327) DNA gyrase, B subunit [...   832   0.0   
gb|AAL53004.1|  (AE009615) DNA GYRASE SUBUNIT B [Brucella me...   831   0.0   
dbj|BAB51680.1|  (AP003005) DNA gyrase subunit B [Mesorhizob...   813   0.0   
dbj|BAC46088.1|  (AP005937) DNA gyrase subunit B [Bradyrhizo...   810   0.0   
gb|AAL30092.1|  (AY057934) DNA gyrase subunit B [Xanthomonas...   806   0.0   
gb|AAL03422.1|  (AE008642) DNA gyrase subunit B [EC:5.99.1.3...   794   0.0   
gb|AAK22147.1|  (AE005689) DNA gyrase subunit B [Caulobacter...   789   0.0   
gb|AAF18271.1|  (AF088897) DNA gyrase subunit B [Zymomonas m...   788   0.0   
emb|CAA15027.1|  (AJ235272) DNA GYRASE SUBUNIT B (gyrB2) [Ri...   780   0.0   
dbj|BAB83065.1|  (AB053147) DNA gyrase subunit B [Alcanivora...   780   0.0   
dbj|BAB17361.1|  (AB039391) DNA gyrase subunit B [Pseudomona...   776   0.0   
dbj|BAB17360.1|  (AB039390) DNA gyrase subunit B [Pseudomona...   776   0.0   
dbj|BAB17359.1|  (AB039389) DNA gyrase subunit B [Pseudomona...   775   0.0   
dbj|BAB83058.1|  (AB053140) DNA gyrase subunit B [Alcanivora...   773   0.0   
dbj|BAB83071.1|  (AB053153) DNA gyrase subunit B [Alcanivora...   770   0.0   
dbj|BAB17356.1|  (AB039386) DNA gyrase subunit B [Pseudomona...   770   0.0   
dbj|BAB17357.1|  (AB039387) DNA gyrase subunit B [Pseudomona...   768   0.0   
dbj|BAB86993.1|  (AB014922) DNA gyrase subunit B [Halomonas ...   754   0.0   
dbj|BAB86994.1|  (AB014923) DNA gyrase subunit B [Halomonas ...   751   0.0   
dbj|BAC53887.1|  (AB086983) DNA gyrase B subunit [Tatlockia ...   723   0.0   
dbj|BAB17358.1|  (AB039388) DNA gyrase subunit B [Pseudomona...   722   0.0   
dbj|BAB87023.1|  (AB014952) DNA gyrase subunit B [Vibrio gaz...   715   0.0   
dbj|BAB17363.1|  (AB039393) DNA gyrase subunit B [Pseudomona...   713   0.0   
dbj|BAB87021.1|  (AB014950) DNA gyrase subunit B [Vibrio cam...   712   0.0   
gb|AAP77724.1|  (AE017147) DNA gyrase (topoisomerase II) [He...   710   0.0   
dbj|BAB87025.1|  (AB014954) DNA gyrase subunit B [Listonella...   708   0.0   
dbj|BAB17353.1|  (AB039383) DNA gyrase subunit B [Pseudomona...   707   0.0   
dbj|BAB17351.1|  (AB039381) DNA gyrase subunit B [Pseudomona...   706   0.0   
dbj|BAB17362.1|  (AB039392) DNA gyrase subunit B [Pseudomona...   706   0.0   
dbj|BAB17352.1|  (AB039382) DNA gyrase subunit B [Pseudomona...   704   0.0   
dbj|BAB87022.1|  (AB014951) DNA gyrase subunit B [Vibrio dia...   704   0.0   
dbj|BAB17355.1|  (AB039385) DNA gyrase subunit B [Pseudomona...   704   0.0   
dbj|BAB17354.1|  (AB039384) DNA gyrase subunit B [Pseudomona...   701   0.0   
dbj|BAA07145.1|  (D37927) DNA gyrase B subunit [Pseudomonas ...   694   0.0   
dbj|BAA07144.1|  (D37926) DNA gyrase B subunit [Pseudomonas ...   693   0.0   
dbj|BAA25341.1|  (D86016) DNA gyrase B subunit [Pseudomonas ...   692   0.0   
dbj|BAA25343.1|  (D86018) DNA gyrase B subunit [Pseudomonas ...   691   0.0   
dbj|BAA25342.1|  (D86017) DNA gyrase B subunit [Pseudomonas ...   689   0.0   
dbj|BAA25338.1|  (D86013) DNA gyrase B subunit [Pseudomonas ...   688   0.0   
dbj|BAB87018.1|  (AB014947) DNA gyrase subunit B [Spirillum ...   685   0.0   
dbj|BAA25332.1|  (D86007) DNA gyrase B subunit [Pseudomonas ...   685   0.0   
dbj|BAA25334.1|  (D86009) DNA gyrase B subunit [Pseudomonas ...   684   0.0   
dbj|BAA25344.1|  (D86019) DNA gyrase B subunit [Pseudomonas ...   682   0.0   
dbj|BAA25339.1|  (D86014) DNA gyrase B subunit [Pseudomonas ...   680   0.0   
dbj|BAA25335.1|  (D86010) DNA gyrase B subunit [Pseudomonas ...   680   0.0   
dbj|BAA25340.1|  (D86015) DNA gyrase B subunit [Pseudomonas ...   679   0.0   

>gb|AAG03394.1|AE004440_4 (AE004440) DNA gyrase subunit B [Pseudomonas aeruginosa PAO1]
          Length = 806

 Score = 1601 bits (4145), Expect = 0.0
 Identities = 806/806 (100%), Positives = 806/806 (100%)

Query: 1   MSENNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSE 60
           MSENNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSE
Sbjct: 1   MSENNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSE 60

Query: 61  ISITIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGV 120
           ISITIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGV
Sbjct: 61  ISITIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGV 120

Query: 121 GVSVVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSN 180
           GVSVVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSN
Sbjct: 121 GVSVVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSN 180

Query: 181 IHFSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVNEV 240
           IHFSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVNEV
Sbjct: 181 IHFSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVNEV 240

Query: 241 FHFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIE 300
           FHFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIE
Sbjct: 241 FHFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIE 300

Query: 301 AEGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFA 360
           AEGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFA
Sbjct: 301 AEGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFA 360

Query: 361 DFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALS 420
           DFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALS
Sbjct: 361 DFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALS 420

Query: 421 ELYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGI 480
           ELYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGI
Sbjct: 421 ELYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGI 480

Query: 481 GREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVK 540
           GREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVK
Sbjct: 481 GREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVK 540

Query: 541 RGKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLS 600
           RGKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLS
Sbjct: 541 RGKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLS 600

Query: 601 RLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERH 660
           RLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERH
Sbjct: 601 RLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERH 660

Query: 661 LWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISA 720
           LWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISA
Sbjct: 661 LWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISA 720

Query: 721 FKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFN 780
           FKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFN
Sbjct: 721 FKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFN 780

Query: 781 TLMGDAVEPRRDFIESNALAVSNLDV 806
           TLMGDAVEPRRDFIESNALAVSNLDV
Sbjct: 781 TLMGDAVEPRRDFIESNALAVSNLDV 806



>dbj|BAA85765.1| (AB005881) DNA gyrase subunit B [Pseudomonas aeruginosa]
          Length = 807

 Score = 1575 bits (4078), Expect = 0.0
 Identities = 797/807 (98%), Positives = 797/807 (98%), Gaps = 1/807 (0%)

Query: 1   MSENNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSE 60
           MSENNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSE
Sbjct: 1   MSENNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSE 60

Query: 61  ISITIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGV 120
           ISITIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGV
Sbjct: 61  ISITIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGV 120

Query: 121 GVSVVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGE-TDGSGTEVHFKPSPETFS 179
           GVSVVNALSHELRLTIRRHNKVWEQVYHHG    P    G  TDGSGTEVHFKPSPETFS
Sbjct: 121 GVSVVNALSHELRLTIRRHNKVWEQVYHHGGSAVPTARSGRRTDGSGTEVHFKPSPETFS 180

Query: 180 NIHFSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVNE 239
           NIHFSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVNE
Sbjct: 181 NIHFSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVNE 240

Query: 240 VFHFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYI 299
           VFHFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYI
Sbjct: 241 VFHFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYI 300

Query: 300 EAEGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYF 359
           EAEGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYF
Sbjct: 301 EAEGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYF 360

Query: 360 ADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPAL 419
           ADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPAL
Sbjct: 361 ADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPAL 420

Query: 420 SELYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCG 479
           SELYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCG
Sbjct: 421 SELYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCG 480

Query: 480 IGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKV 539
           IGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKV
Sbjct: 481 IGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKV 540

Query: 540 KRGKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRL 599
           KRGKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRL
Sbjct: 541 KRGKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRL 600

Query: 600 SRLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRER 659
           SRLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRER
Sbjct: 601 SRLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRER 660

Query: 660 HLWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPIS 719
           HLWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPIS
Sbjct: 661 HLWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPIS 720

Query: 720 AFKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIF 779
           AFKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIF
Sbjct: 721 AFKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIF 780

Query: 780 NTLMGDAVEPRRDFIESNALAVSNLDV 806
           NTLMGDAVEPRRDFIESNALAVSNLDV
Sbjct: 781 NTLMGDAVEPRRDFIESNALAVSNLDV 807



>gb|AAO53561.1| (AE016856) DNA gyrase, subunit B [Pseudomonas syringae pv. tomato
           str. DC3000]
          Length = 805

 Score = 1416 bits (3665), Expect = 0.0
 Identities = 696/805 (86%), Positives = 757/805 (94%), Gaps = 1/805 (0%)

Query: 1   MSENNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSE 60
           MSEN TYDSSSIKVLKGLDAVRKRPGMYIGDTDDG+GLHHMVFEVVDNSIDEALAG+C +
Sbjct: 1   MSENQTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDD 60

Query: 61  ISITIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGV 120
           ISI IH DESITVRDNGRGIPVD+HKEEGVSAAEVIMTVLHAGGKFDDN+YKVSGGLHGV
Sbjct: 61  ISIIIHPDESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV 120

Query: 121 GVSVVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSN 180
           GVSVVNALS  L LT+RR  K+WEQ Y HGVPQ P++ VGE+D +GT++HFKPS ETF N
Sbjct: 121 GVSVVNALSELLLLTVRRSGKIWEQTYIHGVPQEPMKIVGESDSTGTQIHFKPSAETFKN 180

Query: 181 IHFSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVNEV 240
           IHFSWDILAKRIRELSFLNSGVGI+L+DER+GKEELFKYEGGL+AFVEYLNTNKT VNEV
Sbjct: 181 IHFSWDILAKRIRELSFLNSGVGIVLKDERSGKEELFKYEGGLRAFVEYLNTNKTPVNEV 240

Query: 241 FHFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIE 300
           FHFNVQR+ DG+GVE+ALQWNDSFNENLLCFTNNIPQRDGGTHL GFRSALTRNLNNYIE
Sbjct: 241 FHFNVQRD-DGIGVEIALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSALTRNLNNYIE 299

Query: 301 AEGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFA 360
            EGLAKK K+ATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYF+
Sbjct: 300 QEGLAKKHKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFS 359

Query: 361 DFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALS 420
           DFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALS
Sbjct: 360 DFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALS 419

Query: 421 ELYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGI 480
           ELY+VEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKM+SSQEVGTLITALGCGI
Sbjct: 420 ELYLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGI 479

Query: 481 GREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVK 540
           GREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQ+PELIERGYIYIAQPPLYKVK
Sbjct: 480 GREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELIERGYIYIAQPPLYKVK 539

Query: 541 RGKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLS 600
           +GKQEQYIKDD+AMEEYMTQSALEDASLH++E APG+SG ALEKLV+++R V+ TLKRLS
Sbjct: 540 KGKQEQYIKDDEAMEEYMTQSALEDASLHLSESAPGISGTALEKLVHDFRMVMKTLKRLS 599

Query: 601 RLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERH 660
           RLYPQELTEHF+YLP ++++ L++   MQ WL  F  RL   EKSGL YKASLREDRER+
Sbjct: 600 RLYPQELTEHFVYLPPITLEQLSDHEGMQAWLALFDVRLRTGEKSGLVYKASLREDRERN 659

Query: 661 LWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISA 720
           +WLPEVEL++HGLS+Y+TFNRDFF SNDY++V+ LG Q+++LLE+GAYVQ+GERK+P++ 
Sbjct: 660 VWLPEVELISHGLSNYITFNRDFFGSNDYKTVTALGAQISTLLEEGAYVQRGERKKPVTE 719

Query: 721 FKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFN 780
           FK  L WLMAE TKRH+IQRYKGLGEMNP+QLWETTMDP+VRRMLKVTIEDAI ADQIFN
Sbjct: 720 FKQALAWLMAESTKRHTIQRYKGLGEMNPDQLWETTMDPSVRRMLKVTIEDAIGADQIFN 779

Query: 781 TLMGDAVEPRRDFIESNALAVSNLD 805
           TLMGDAVEPRRDFIESNALAVSNLD
Sbjct: 780 TLMGDAVEPRRDFIESNALAVSNLD 804



>gb|AAN65647.1|AE016191_4 (AE016774) DNA gyrase, subunit B [Pseudomonas putida KT2440]
          Length = 806

 Score = 1388 bits (3593), Expect = 0.0
 Identities = 686/806 (85%), Positives = 752/806 (93%), Gaps = 2/806 (0%)

Query: 1   MSENNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSE 60
           MSEN TYDSSSIKVLKGLDAVRKRPGMYIGDTDDG+GLHHMVFEVVDNSIDEALAG+C +
Sbjct: 1   MSENQTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDD 60

Query: 61  ISITIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGV 120
           I++ IH DESI+VRDNGRGIPVD+HKEEGVSAAEVIMTVLHAGGKFDDN+YKVSGGLHGV
Sbjct: 61  ITVIIHPDESISVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV 120

Query: 121 GVSVVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSN 180
           GVSVVNALS +L LT+RR  K+WEQ Y HGVPQ P+  VG+++ +GT +HFKPS ETF N
Sbjct: 121 GVSVVNALSEKLVLTVRRSGKIWEQTYVHGVPQAPMAVVGDSETTGTHIHFKPSAETFKN 180

Query: 181 IHFSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVN-E 239
           IHFSWDILAKRIRELSFLNSGVGILL+DER+GKEE FKYEGGL+AFVEYLNTNKT VN +
Sbjct: 181 IHFSWDILAKRIRELSFLNSGVGILLKDERSGKEEFFKYEGGLRAFVEYLNTNKTPVNSQ 240

Query: 240 VFHFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYI 299
           VFHFNVQR+ DGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHL GFRS+LTR+LN+YI
Sbjct: 241 VFHFNVQRD-DGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSSLTRSLNSYI 299

Query: 300 EAEGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYF 359
           E EGLAKK K+ATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEM KYF
Sbjct: 300 EQEGLAKKNKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMNKYF 359

Query: 360 ADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPAL 419
           ADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPAL
Sbjct: 360 ADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPAL 419

Query: 420 SELYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCG 479
           SELY+VEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKM+SSQEVGTLITALGCG
Sbjct: 420 SELYLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCG 479

Query: 480 IGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKV 539
           IGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQ+PEL+ERGYIYIAQPPLYKV
Sbjct: 480 IGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELVERGYIYIAQPPLYKV 539

Query: 540 KRGKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRL 599
           KRGKQEQYIKDD+AMEEYMTQSALEDASLH++E AP +SG  LE LVNE+R V+ TLKRL
Sbjct: 540 KRGKQEQYIKDDEAMEEYMTQSALEDASLHLDESAPAVSGVQLEALVNEFRSVMKTLKRL 599

Query: 600 SRLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRER 659
           SRLYP+ELTEHF+YLP V+++ L + + MQ WL +FQARL +++KSGL Y ASLRED+ER
Sbjct: 600 SRLYPEELTEHFVYLPEVTLEQLGDHAVMQAWLAQFQARLNSSQKSGLAYNASLREDKER 659

Query: 660 HLWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPIS 719
           ++WLPEVE+ +HGL+SY+TFNRDFF SNDYR+V  +G +L+SLL +GAYVQ+GER++ I 
Sbjct: 660 NVWLPEVEITSHGLASYITFNRDFFGSNDYRTVVNIGAKLSSLLGEGAYVQRGERRKAIV 719

Query: 720 AFKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIF 779
            FK+GLDWLM E TKRH+IQRYKGLGEMNP+QLWETTMDP VRRMLKVTIEDAIAADQIF
Sbjct: 720 EFKEGLDWLMNETTKRHTIQRYKGLGEMNPDQLWETTMDPTVRRMLKVTIEDAIAADQIF 779

Query: 780 NTLMGDAVEPRRDFIESNALAVSNLD 805
           NTLMGDAVEPRRDFIESNAL+VSNLD
Sbjct: 780 NTLMGDAVEPRRDFIESNALSVSNLD 805



>emb|CAA38447.1| (X54631) unnamed protein product [Pseudomonas putida]
          Length = 806

 Score = 1385 bits (3584), Expect = 0.0
 Identities = 684/806 (84%), Positives = 751/806 (93%), Gaps = 2/806 (0%)

Query: 1   MSENNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSE 60
           MSEN TYDSSSIKVLKGLDAVRKRPGMYIGDTDDG+GLHHMVFEVVDNSIDEALAG+C +
Sbjct: 1   MSENQTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDD 60

Query: 61  ISITIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGV 120
           I++ IHTDESI+VRDNGRGIPVD+HKEEGVSAAEVIMTVLHAGGKFDDN+YKVSGGLHGV
Sbjct: 61  ITVIIHTDESISVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV 120

Query: 121 GVSVVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSN 180
           GVSVVNALS +L LT+RR  K+WEQ Y HGVPQ P+  VGE++ +GT +HFKPS ETF N
Sbjct: 121 GVSVVNALSEKLVLTVRRSGKIWEQTYVHGVPQAPMAVVGESETTGTHIHFKPSAETFKN 180

Query: 181 IHFSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVN-E 239
           IHFSWDILAKRIRELSFLNSGVGILL+DER+GKEE FKYEGGL+AFVEYLNTNKT VN +
Sbjct: 181 IHFSWDILAKRIRELSFLNSGVGILLKDERSGKEEFFKYEGGLRAFVEYLNTNKTPVNSQ 240

Query: 240 VFHFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYI 299
           VFHF+VQRE DGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHL GFRS+LTR+LN+YI
Sbjct: 241 VFHFSVQRE-DGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSSLTRSLNSYI 299

Query: 300 EAEGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYF 359
           E EGLAKK K+ATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEM KYF
Sbjct: 300 EQEGLAKKNKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMNKYF 359

Query: 360 ADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPAL 419
           +DFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPAL
Sbjct: 360 SDFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPAL 419

Query: 420 SELYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCG 479
           SELY+VEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKM+SSQEVGTLITALGCG
Sbjct: 420 SELYLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCG 479

Query: 480 IGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKV 539
           IGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQ+PEL+ERGYIYIAQPPLYKV
Sbjct: 480 IGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELVERGYIYIAQPPLYKV 539

Query: 540 KRGKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRL 599
           K+GKQEQYIKDD+AMEEYMTQSALEDASLH++E AP +SG  LE LVNE+R V+ TLKRL
Sbjct: 540 KKGKQEQYIKDDEAMEEYMTQSALEDASLHLDESAPAVSGVQLESLVNEFRSVMKTLKRL 599

Query: 600 SRLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRER 659
           SRLYP+ELTEHF+YLP V+++ L + + MQ WL K Q RL +++KSGL Y ASLRED+ER
Sbjct: 600 SRLYPEELTEHFVYLPEVTLEQLGDHAVMQAWLAKLQERLNSSQKSGLAYNASLREDKER 659

Query: 660 HLWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPIS 719
           ++WLPEVE+ +HGL+SY+TFNRDFF SNDYR+V  +G +L+SLL +GAYVQ+GER++ I 
Sbjct: 660 NVWLPEVEITSHGLASYITFNRDFFGSNDYRTVVNIGAKLSSLLGEGAYVQRGERRKAIV 719

Query: 720 AFKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIF 779
            FK+GLDWLM E TKRH+IQRYKGLGEMNP+QLWETTMDP VRRMLKVTIEDAIAADQIF
Sbjct: 720 EFKEGLDWLMNETTKRHTIQRYKGLGEMNPDQLWETTMDPTVRRMLKVTIEDAIAADQIF 779

Query: 780 NTLMGDAVEPRRDFIESNALAVSNLD 805
           NTLMGDAVEPRR+FIESNAL+VSNLD
Sbjct: 780 NTLMGDAVEPRREFIESNALSVSNLD 805



>gb|AAN53098.1|AE015452_11 (AE015452) DNA gyrase, B subunit [Shewanella oneidensis MR-1]
          Length = 805

 Score = 1145 bits (2962), Expect = 0.0
 Identities = 569/807 (70%), Positives = 670/807 (83%), Gaps = 3/807 (0%)

Query: 1   MSENNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSE 60
           MSEN+ YDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAG+C++
Sbjct: 1   MSENS-YDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCTD 59

Query: 61  ISITIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGV 120
           I+ITIH D S++V+D+GRGIPV IH+EEGVSAAEVIMTVLHAGGKFDDN+YKVSGGLHGV
Sbjct: 60  ITITIHVDGSVSVKDDGRGIPVSIHEEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV 119

Query: 121 GVSVVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSN 180
           GVSVVNALS +L+LTIRR  KV EQ Y HGVP  P++E+G+   +GTE+ F PS +TFSN
Sbjct: 120 GVSVVNALSKKLQLTIRRDGKVHEQFYTHGVPDAPIKEIGDATKTGTEIRFWPSEQTFSN 179

Query: 181 IHFSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVN-E 239
           + F ++ILAKR+RELSFLNSGVGI L DER  K E FKYEGG+ AFV+YLN NKT VN +
Sbjct: 180 VEFHFEILAKRVRELSFLNSGVGIRLVDERDNKNEFFKYEGGISAFVDYLNRNKTPVNKD 239

Query: 240 VFHFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYI 299
           VFHF +Q  +DG+ VEVA+QWND + EN+ CFTNNIPQRDGGTHLAGFRSALTRNLNNY+
Sbjct: 240 VFHF-MQERDDGITVEVAMQWNDGYQENIFCFTNNIPQRDGGTHLAGFRSALTRNLNNYM 298

Query: 300 EAEGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYF 359
           E EG  KK K   TGDDAREGLTA+ISVKVPDPKFSSQTKDKLVSSEVK AVEQ MG+  
Sbjct: 299 ENEGYNKKGKTNATGDDAREGLTAVISVKVPDPKFSSQTKDKLVSSEVKAAVEQTMGEKL 358

Query: 360 ADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPAL 419
            D+LLENP +AK +VGK++DAARAREAARKAREMTRRKGALD+ GLPGKLADCQEKDP L
Sbjct: 359 NDYLLENPADAKLIVGKIVDAARAREAARKAREMTRRKGALDLGGLPGKLADCQEKDPGL 418

Query: 420 SELYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCG 479
           SE+YIVEGDSAGGSAKQGRNR+ QAILPLKGKILNVEKARFDKMLSSQEV TLITALGCG
Sbjct: 419 SEIYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCG 478

Query: 480 IGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKV 539
           IGR+EYN DK RYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGY+YIAQPPL+KV
Sbjct: 479 IGRDEYNPDKTRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYVYIAQPPLFKV 538

Query: 540 KRGKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRL 599
           K+GKQEQY+KD+ A+ +Y+T  AL+  S++ ++ APG+SG  LE+LV +YR V A + RL
Sbjct: 539 KKGKQEQYLKDESALTQYLTTQALDGTSIYPSQGAPGMSGEPLERLVTQYREVEAIVARL 598

Query: 600 SRLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRER 659
            + YP  +T   +Y P +S D LA+E+ M+ W++ F   L   E SG+ Y      D ER
Sbjct: 599 EQRYPTHITNRMLYHPMISNDMLADEAKMKEWIDAFIHELVELENSGVLYSGEPVLDPER 658

Query: 660 HLWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPIS 719
            ++LP++ +  HG+ ++  F+ DFF S DY+ ++ LG  L  L+E G YVQ+G+R + + 
Sbjct: 659 KVYLPKITIRKHGIDTHYLFSYDFFQSMDYQRIAKLGAALEGLIEVGGYVQRGDRVKEVG 718

Query: 720 AFKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIF 779
           +F + LDW ++E  +   IQRYKGLGEMNPEQLWETTMDP  RRML+VTI+DA+ ADQ+F
Sbjct: 719 SFIEALDWTISEAKRGLYIQRYKGLGEMNPEQLWETTMDPESRRMLQVTIDDAVGADQLF 778

Query: 780 NTLMGDAVEPRRDFIESNALAVSNLDV 806
             LMGD VEPRR+FIE+NAL V+NLDV
Sbjct: 779 TCLMGDQVEPRREFIEANALNVANLDV 805



>dbj|BAC16536.1| (AB092340) DNA topoisomerase chain B [Shewanella violacea]
          Length = 806

 Score = 1129 bits (2919), Expect = 0.0
 Identities = 567/808 (70%), Positives = 662/808 (81%), Gaps = 4/808 (0%)

Query: 1   MSENNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSE 60
           MSEN+ YDSSSIKVLKGLDAVRKRPGMYIGDTDDG+GLHHMVFEVVDNSIDEALAG+CSE
Sbjct: 1   MSENS-YDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCSE 59

Query: 61  ISITIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGV 120
           + ITIH D S++V+D+GRGIPVDIH EEG+SAAEVIMTVLHAGGKFDDN+YKVSGGLHGV
Sbjct: 60  VIITIHADNSVSVKDDGRGIPVDIHPEEGISAAEVIMTVLHAGGKFDDNSYKVSGGLHGV 119

Query: 121 GVSVVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFS- 179
           GVSVVNALS +L+LTIRR+ K++EQ Y  GVP  P++E+G+   +GTE+ F PS ETF+ 
Sbjct: 120 GVSVVNALSEKLQLTIRRNGKLYEQFYTMGVPDAPIKEIGDATSTGTELRFWPSHETFTT 179

Query: 180 NIHFSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVN- 238
           NI F +DIL KR+RELSFLNSGVGI L DER  ++E F+Y+GG+ AFV+YLN NKTAVN 
Sbjct: 180 NIKFHFDILVKRVRELSFLNSGVGIRLIDERDNRDEFFQYQGGISAFVDYLNVNKTAVNK 239

Query: 239 EVFHFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNY 298
           +VFHF +Q  +DG+ VEVA+QWND F EN+ CFTNNIPQRDGGTHLAGFR ALTRNLN Y
Sbjct: 240 DVFHF-IQERDDGITVEVAMQWNDGFQENIFCFTNNIPQRDGGTHLAGFRGALTRNLNAY 298

Query: 299 IEAEGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKY 358
           +E EG  KK K   TGDDAREGLTA+ISVKVPDPKFSSQTKDKLVSSEVK+AVEQ MG+ 
Sbjct: 299 MEREGYNKKGKTNATGDDAREGLTAVISVKVPDPKFSSQTKDKLVSSEVKSAVEQTMGEK 358

Query: 359 FADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPA 418
             D+L+E+PNEA+ +VGK+IDA+RAREAARKAREMTRRKGALD+ GLPGKLADCQEKDPA
Sbjct: 359 LGDYLMEHPNEARLIVGKIIDASRAREAARKAREMTRRKGALDLGGLPGKLADCQEKDPA 418

Query: 419 LSELYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGC 478
           LSE+YIVEGDSAGGSAKQGRNR+ QAILPLKGKILNVEKARFDKMLSSQEV TLITALGC
Sbjct: 419 LSEIYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGC 478

Query: 479 GIGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYK 538
           GIGR+EY+ DK RYHNI+IMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYK
Sbjct: 479 GIGRDEYDPDKTRYHNIVIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYK 538

Query: 539 VKRGKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKR 598
           VK+G+QEQY+KD+ A+ E++T  AL+   LH +  AP +SGA LEKLV +YR V     R
Sbjct: 539 VKKGRQEQYLKDELALTEFLTNLALDGGELHSSADAPAISGAPLEKLVYQYREVETIFDR 598

Query: 599 LSRLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRE 658
           L+  YP  LTE  +Y P +  + LA+E+ ++ W ++F A LT  E  G+ Y A    D E
Sbjct: 599 LNMRYPTLLTERMLYHPALDAEMLADEAKVKQWCDEFVADLTEKESGGVMYSADPVMDPE 658

Query: 659 RHLWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPI 718
           R ++LP V +  HG+ +   F  DF  S+DY  ++ L   L  L+ +G Y+++GER + I
Sbjct: 659 RKVYLPNVHIRKHGIDTSYLFTYDFLNSSDYERMAKLAAALEGLIVEGGYIKRGERMKEI 718

Query: 719 SAFKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQI 778
           S F + L+WLM +  +   IQRYKGLGEMNPEQLWETTMDP  RRML VTIEDAI ADQ+
Sbjct: 719 STFVEALNWLMNDSRRGLYIQRYKGLGEMNPEQLWETTMDPETRRMLVVTIEDAIGADQL 778

Query: 779 FNTLMGDAVEPRRDFIESNALAVSNLDV 806
           F  LMGD VEPRR FIE NAL V+NLDV
Sbjct: 779 FTCLMGDQVEPRRQFIEENALNVANLDV 806



>gb|AAN83054.1|AE016769_169 (AE016769) DNA gyrase subunit B [Escherichia coli CFT073]
          Length = 805

 Score = 1127 bits (2915), Expect = 0.0
 Identities = 552/805 (68%), Positives = 667/805 (82%), Gaps = 4/805 (0%)

Query: 4   NNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEISI 63
           +N+YDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDN+IDEALAG+C EI +
Sbjct: 3   SNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIIV 62

Query: 64  TIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVGVS 123
           TIH D S++V+D+GRGIP  IH EEGVSAAEVIMTVLHAGGKFDDN+YKVSGGLHGVGVS
Sbjct: 63  TIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVS 122

Query: 124 VVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSNI-H 182
           VVNALS +L L I+R  K+  Q+Y HGVPQ PL   GET+ +GT V F PS ETF+N+  
Sbjct: 123 VVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLETFTNVTE 182

Query: 183 FSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVN-EVF 241
           F +DILAKR+RELSFLNSGV I LRD+R GKE+ F YEGG+KAFVEYLN NKT ++  +F
Sbjct: 183 FEYDILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNIF 242

Query: 242 HFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIEA 301
           +F+   E+DG+GVEVALQWND F EN+ CFTNNIPQRDGGTHLAGFR+A+TR LN Y++ 
Sbjct: 243 YFST--EKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDK 300

Query: 302 EGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFAD 361
           EG +KK K++ TGDDAREGL A++SVKVPDPKFSSQTKDKLVSSEVK+AVEQ+M +  A+
Sbjct: 301 EGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAE 360

Query: 362 FLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSE 421
           +LLENP +AK VVGK+IDAARAREAAR+AREMTRRKGALD+AGLPGKLADCQE+DPALSE
Sbjct: 361 YLLENPTDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSE 420

Query: 422 LYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIG 481
           LY+VEGDSAGGSAKQGRNR+ QAILPLKGKILNVEKARFDKMLSSQEV TLITALGCGIG
Sbjct: 421 LYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG 480

Query: 482 REEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVKR 541
           R+EYN DKLRYH+IIIMTDADVDGSHIRTLLLTFF+RQMPE++ERG++YIAQPPLYKVK+
Sbjct: 481 RDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKK 540

Query: 542 GKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLSR 601
           GKQEQYIKDD+AM++Y    AL+ A+LH N  AP L+G ALEKLV+EY      + R+ R
Sbjct: 541 GKQEQYIKDDEAMDQYQISIALDGATLHTNASAPALAGEALEKLVSEYNATQKMINRMER 600

Query: 602 LYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERHL 661
            YP+ + +  IY PT++  DL++E  +  W+    + L   E+ G  +K  +  + E++L
Sbjct: 601 RYPKAMLKELIYQPTLTEADLSDEQTVTRWVNALVSELNDKEQHGSQWKFDVHTNAEQNL 660

Query: 662 WLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISAF 721
           + P V +  HG+ +    + +F    +YR +  LG++L  LLE+ A++++GER++P+++F
Sbjct: 661 FEPIVRVRTHGVDTDYPLDHEFITGGEYRRICTLGEKLRGLLEEDAFIERGERRQPVASF 720

Query: 722 KDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFNT 781
           +  LDWL+ E  +  SIQRYKGLGEMNPEQLWETTMDP  RRML+VT++DAIAADQ+F T
Sbjct: 721 EQALDWLVKESRRGLSIQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFTT 780

Query: 782 LMGDAVEPRRDFIESNALAVSNLDV 806
           LMGDAVEPRR FIE NAL  +N+D+
Sbjct: 781 LMGDAVEPRRAFIEENALKAANIDI 805



>gb|AAM87652.1|AE014012_9 (AE014012) DNA gyrase subunit B, type II topoisomerase [Yersinia
           pestis KIM]
          Length = 805

 Score = 1127 bits (2915), Expect = 0.0
 Identities = 559/805 (69%), Positives = 663/805 (82%), Gaps = 4/805 (0%)

Query: 4   NNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEISI 63
           +NTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDN+IDEALAG+C EI +
Sbjct: 3   SNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEILV 62

Query: 64  TIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVGVS 123
           TIH D S++V+D+GRGIP  +H EEGVSAAEVIMTVLHAGGKFDDN+YKVSGGLHGVGVS
Sbjct: 63  TIHADNSVSVQDDGRGIPTGMHDEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVS 122

Query: 124 VVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSN-IH 182
           VVNALS +L L IRR  KV EQ Y  GVPQ PL+ VGET+ +GT V F PS +TF+N   
Sbjct: 123 VVNALSEKLELVIRREGKVHEQTYKMGVPQAPLKVVGETEQTGTTVRFWPSFQTFTNNTE 182

Query: 183 FSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVN-EVF 241
           F ++ILAKR+RELSFLNSGV I L+D+R  KE+ F YEGG+KAFVEYLN NK  ++ +VF
Sbjct: 183 FQYEILAKRLRELSFLNSGVSIKLKDKRNDKEDHFHYEGGIKAFVEYLNKNKNPIHPKVF 242

Query: 242 HFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIEA 301
           +F+  +  D +GVEVALQWND F EN+ CFTNNIPQRDGGTHL GFR+A+TR LN+Y++ 
Sbjct: 243 YFSTMK--DDIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLVGFRTAMTRTLNSYMDK 300

Query: 302 EGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFAD 361
           EG +KK KI+ TGDDAREGL A++SVKVPDPKFSSQTKDKLVSSEVKTAVE  M +   +
Sbjct: 301 EGYSKKAKISATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKTAVETLMNEKLVE 360

Query: 362 FLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSE 421
           +LLENP +AK VVGK+IDAARAREAARKAREMTRRKGALD+AGLPGKLADCQE+DPALSE
Sbjct: 361 YLLENPTDAKIVVGKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQERDPALSE 420

Query: 422 LYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIG 481
           LY+VEGDSAGGSAKQGRNR+ QAILPLKGKILNVEKARFDKMLSSQEV TLITALGCGIG
Sbjct: 421 LYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG 480

Query: 482 REEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVKR 541
           R+EYN DKLRYHNIIIMTDADVDGSHIRTLLLTFF+RQMPE+IERG+++IAQPPLYKVK+
Sbjct: 481 RDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGHVFIAQPPLYKVKK 540

Query: 542 GKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLSR 601
           GKQEQYIKDD AME+Y    AL+ A+LH N HAP L+G  LEKLV E+  V  T+ R+ R
Sbjct: 541 GKQEQYIKDDDAMEQYQMTLALDGAALHTNAHAPALAGEPLEKLVAEHYSVQKTIARMER 600

Query: 602 LYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERHL 661
            YP+ L  + IY PT+  +DL N+  +  W++     L   E  G +Y + +RE+RER L
Sbjct: 601 RYPRALLNNLIYQPTLQEEDLGNKEVVTQWIDSLVVLLNEKEHHGSSYSSVVRENRERQL 660

Query: 662 WLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISAF 721
           + P + +  HG+ +    + DF    +YR + LLGD+L  L+EDGA+V++GER+ P+S+F
Sbjct: 661 FEPILRIRTHGVDTDYDLDFDFIHGGEYRKICLLGDKLRGLIEDGAFVERGERRVPVSSF 720

Query: 722 KDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFNT 781
           ++ LDWL+ E  +  +IQRYKGLGEMNP+QLWETTMDP  RRML+V ++DAIAADQ+F T
Sbjct: 721 EEALDWLVKESRRGLAIQRYKGLGEMNPDQLWETTMDPESRRMLRVMVKDAIAADQLFTT 780

Query: 782 LMGDAVEPRRDFIESNALAVSNLDV 806
           LMGDAVEPRR FIE NAL  +N+D+
Sbjct: 781 LMGDAVEPRRAFIEENALRAANIDI 805



>emb|CAC93544.1| (AJ414160) DNA gyrase subunit B [Yersinia pestis CO92]
          Length = 804

 Score = 1127 bits (2915), Expect = 0.0
 Identities = 559/805 (69%), Positives = 663/805 (82%), Gaps = 4/805 (0%)

Query: 4   NNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEISI 63
           +NTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDN+IDEALAG+C EI +
Sbjct: 2   SNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEILV 61

Query: 64  TIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVGVS 123
           TIH D S++V+D+GRGIP  +H EEGVSAAEVIMTVLHAGGKFDDN+YKVSGGLHGVGVS
Sbjct: 62  TIHADNSVSVQDDGRGIPTGMHDEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVS 121

Query: 124 VVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSN-IH 182
           VVNALS +L L IRR  KV EQ Y  GVPQ PL+ VGET+ +GT V F PS +TF+N   
Sbjct: 122 VVNALSEKLELVIRREGKVHEQTYKMGVPQAPLKVVGETEQTGTTVRFWPSFQTFTNNTE 181

Query: 183 FSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVN-EVF 241
           F ++ILAKR+RELSFLNSGV I L+D+R  KE+ F YEGG+KAFVEYLN NK  ++ +VF
Sbjct: 182 FQYEILAKRLRELSFLNSGVSIKLKDKRNDKEDHFHYEGGIKAFVEYLNKNKNPIHPKVF 241

Query: 242 HFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIEA 301
           +F+  +  D +GVEVALQWND F EN+ CFTNNIPQRDGGTHL GFR+A+TR LN+Y++ 
Sbjct: 242 YFSTMK--DDIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLVGFRTAMTRTLNSYMDK 299

Query: 302 EGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFAD 361
           EG +KK KI+ TGDDAREGL A++SVKVPDPKFSSQTKDKLVSSEVKTAVE  M +   +
Sbjct: 300 EGYSKKAKISATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKTAVETLMNEKLVE 359

Query: 362 FLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSE 421
           +LLENP +AK VVGK+IDAARAREAARKAREMTRRKGALD+AGLPGKLADCQE+DPALSE
Sbjct: 360 YLLENPTDAKIVVGKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQERDPALSE 419

Query: 422 LYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIG 481
           LY+VEGDSAGGSAKQGRNR+ QAILPLKGKILNVEKARFDKMLSSQEV TLITALGCGIG
Sbjct: 420 LYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG 479

Query: 482 REEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVKR 541
           R+EYN DKLRYHNIIIMTDADVDGSHIRTLLLTFF+RQMPE+IERG+++IAQPPLYKVK+
Sbjct: 480 RDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGHVFIAQPPLYKVKK 539

Query: 542 GKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLSR 601
           GKQEQYIKDD AME+Y    AL+ A+LH N HAP L+G  LEKLV E+  V  T+ R+ R
Sbjct: 540 GKQEQYIKDDDAMEQYQMTLALDGAALHTNAHAPALAGEPLEKLVAEHYSVQKTIARMER 599

Query: 602 LYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERHL 661
            YP+ L  + IY PT+  +DL N+  +  W++     L   E  G +Y + +RE+RER L
Sbjct: 600 RYPRALLNNLIYQPTLQEEDLGNKEVVTQWIDSLVVLLNEKEHHGSSYSSVVRENRERQL 659

Query: 662 WLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISAF 721
           + P + +  HG+ +    + DF    +YR + LLGD+L  L+EDGA+V++GER+ P+S+F
Sbjct: 660 FEPILRIRTHGVDTDYDLDFDFIHGGEYRKICLLGDKLRGLIEDGAFVERGERRVPVSSF 719

Query: 722 KDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFNT 781
           ++ LDWL+ E  +  +IQRYKGLGEMNP+QLWETTMDP  RRML+V ++DAIAADQ+F T
Sbjct: 720 EEALDWLVKESRRGLAIQRYKGLGEMNPDQLWETTMDPESRRMLRVMVKDAIAADQLFTT 779

Query: 782 LMGDAVEPRRDFIESNALAVSNLDV 806
           LMGDAVEPRR FIE NAL  +N+D+
Sbjct: 780 LMGDAVEPRRAFIEENALRAANIDI 804



>gb|AAP18989.1| (AE016991) DNA gyrase subunit B, type II topoisomerase [Shigella
           flexneri 2a str. 2457T]
          Length = 804

 Score = 1125 bits (2911), Expect = 0.0
 Identities = 551/805 (68%), Positives = 667/805 (82%), Gaps = 4/805 (0%)

Query: 4   NNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEISI 63
           +N+YDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDN+IDEALAG+C EI +
Sbjct: 2   SNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIIV 61

Query: 64  TIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVGVS 123
           TIH D S++V+D+GRGIP  IH EEGVSAAEVIMTVLHAGGKFDDN+YKVSGGLHGVGVS
Sbjct: 62  TIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVS 121

Query: 124 VVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSNI-H 182
           VVNALS +L L I+R  K+  Q+Y HGVPQ PL   GET+ +GT V F PS ETF+N+  
Sbjct: 122 VVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLETFTNVTE 181

Query: 183 FSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVN-EVF 241
           F ++ILAKR+RELSFLNSGV I LRD+R GKE+ F YEGG+KAFVEYLN NKT ++  +F
Sbjct: 182 FEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNIF 241

Query: 242 HFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIEA 301
           +F+   E+DG+GVEVALQWND F EN+ CFTNNIPQRDGGTHLAGFR+A+TR LN Y++ 
Sbjct: 242 YFST--EKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDK 299

Query: 302 EGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFAD 361
           EG +KK K++ TGDDAREGL A++SVKVPDPKFSSQTKDKLVSSEVK+AVEQ+M +  A+
Sbjct: 300 EGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAE 359

Query: 362 FLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSE 421
           +LLENP +AK VVGK+IDAARAREAAR+AREMTRRKGALD+AGLPGKLADCQE+DPALSE
Sbjct: 360 YLLENPTDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSE 419

Query: 422 LYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIG 481
           LY+VEGDSAGGSAKQGRNR+ QAILPLKGKILNVEKARFDKMLSSQEV TLITALGCGIG
Sbjct: 420 LYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG 479

Query: 482 REEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVKR 541
           R+EYN DKLRYH+IIIMTDADVDGSHIRTLLLTFF+RQMPE++ERG++YIAQPPLYKVK+
Sbjct: 480 RDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKK 539

Query: 542 GKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLSR 601
           GKQEQYIKDD+AM++Y    AL+ A+LH N  AP L+G ALEKLV+EY      + R+ R
Sbjct: 540 GKQEQYIKDDEAMDQYQISIALDGATLHTNASAPALAGEALEKLVSEYNATQKMINRMER 599

Query: 602 LYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERHL 661
            YP+ + +  IY PT++  DL++E  +  W+    + L   E+ G  +K  +  + E++L
Sbjct: 600 RYPKAMLKELIYQPTLTEADLSDEQTVTRWVNALVSELNDKEQHGSQWKFDVHTNAEQNL 659

Query: 662 WLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISAF 721
           + P V +  HG+ +    + +F    +YR +  LG++L  LLE+ A++++GER++P+++F
Sbjct: 660 FEPIVRVRTHGVDTDYPLDHEFITGGEYRRICTLGEKLRGLLEEDAFIERGERRQPVASF 719

Query: 722 KDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFNT 781
           +  LDWL+ E  +  SIQRYKGLGEMNPEQLWETTMDP  RRML+VT++DAIAADQ+F T
Sbjct: 720 EQALDWLVKESRRGLSIQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFTT 779

Query: 782 LMGDAVEPRRDFIESNALAVSNLDV 806
           LMGDAVEPRR FIE NAL  +N+D+
Sbjct: 780 LMGDAVEPRRAFIEENALKAANIDI 804



>gb|AAN45208.1|AE015383_8 (AE015383) DNA gyrase subunit B GyrB [Shigella flexneri 2a str.
           301]
          Length = 805

 Score = 1125 bits (2911), Expect = 0.0
 Identities = 551/805 (68%), Positives = 667/805 (82%), Gaps = 4/805 (0%)

Query: 4   NNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEISI 63
           +N+YDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDN+IDEALAG+C EI +
Sbjct: 3   SNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIIV 62

Query: 64  TIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVGVS 123
           TIH D S++V+D+GRGIP  IH EEGVSAAEVIMTVLHAGGKFDDN+YKVSGGLHGVGVS
Sbjct: 63  TIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVS 122

Query: 124 VVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSNI-H 182
           VVNALS +L L I+R  K+  Q+Y HGVPQ PL   GET+ +GT V F PS ETF+N+  
Sbjct: 123 VVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLETFTNVTE 182

Query: 183 FSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVN-EVF 241
           F ++ILAKR+RELSFLNSGV I LRD+R GKE+ F YEGG+KAFVEYLN NKT ++  +F
Sbjct: 183 FEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNIF 242

Query: 242 HFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIEA 301
           +F+   E+DG+GVEVALQWND F EN+ CFTNNIPQRDGGTHLAGFR+A+TR LN Y++ 
Sbjct: 243 YFST--EKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDK 300

Query: 302 EGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFAD 361
           EG +KK K++ TGDDAREGL A++SVKVPDPKFSSQTKDKLVSSEVK+AVEQ+M +  A+
Sbjct: 301 EGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAE 360

Query: 362 FLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSE 421
           +LLENP +AK VVGK+IDAARAREAAR+AREMTRRKGALD+AGLPGKLADCQE+DPALSE
Sbjct: 361 YLLENPTDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSE 420

Query: 422 LYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIG 481
           LY+VEGDSAGGSAKQGRNR+ QAILPLKGKILNVEKARFDKMLSSQEV TLITALGCGIG
Sbjct: 421 LYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG 480

Query: 482 REEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVKR 541
           R+EYN DKLRYH+IIIMTDADVDGSHIRTLLLTFF+RQMPE++ERG++YIAQPPLYKVK+
Sbjct: 481 RDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKK 540

Query: 542 GKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLSR 601
           GKQEQYIKDD+AM++Y    AL+ A+LH N  AP L+G ALEKLV+EY      + R+ R
Sbjct: 541 GKQEQYIKDDEAMDQYQISIALDGATLHTNASAPALAGEALEKLVSEYNATQKMINRMER 600

Query: 602 LYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERHL 661
            YP+ + +  IY PT++  DL++E  +  W+    + L   E+ G  +K  +  + E++L
Sbjct: 601 RYPKAMLKELIYQPTLTEADLSDEQTVTRWVNALVSELNDKEQHGSQWKFDVHTNAEQNL 660

Query: 662 WLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISAF 721
           + P V +  HG+ +    + +F    +YR +  LG++L  LLE+ A++++GER++P+++F
Sbjct: 661 FEPIVRVRTHGVDTDYPLDHEFITGGEYRRICTLGEKLRGLLEEDAFIERGERRQPVASF 720

Query: 722 KDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFNT 781
           +  LDWL+ E  +  SIQRYKGLGEMNPEQLWETTMDP  RRML+VT++DAIAADQ+F T
Sbjct: 721 EQALDWLVKESRRGLSIQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFTT 780

Query: 782 LMGDAVEPRRDFIESNALAVSNLDV 806
           LMGDAVEPRR FIE NAL  +N+D+
Sbjct: 781 LMGDAVEPRRAFIEENALKAANIDI 805



>emb|CAA27871.1| (X04341) unnamed protein product [Escherichia coli]
          Length = 804

 Score = 1125 bits (2911), Expect = 0.0
 Identities = 551/805 (68%), Positives = 667/805 (82%), Gaps = 4/805 (0%)

Query: 4   NNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEISI 63
           +N+YDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDN+IDEALAG+C EI +
Sbjct: 2   SNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIIV 61

Query: 64  TIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVGVS 123
           TIH D S++V+D+GRGIP  IH EEGVSAAEVIMTVLHAGGKFDDN+YKVSGGLHGVGVS
Sbjct: 62  TIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVS 121

Query: 124 VVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSNI-H 182
           VVNALS +L L I+R  K+  Q+Y HGVPQ PL   GET+ +GT V F PS ETF+N+  
Sbjct: 122 VVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLETFTNVTE 181

Query: 183 FSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVN-EVF 241
           F ++ILAKR+RELSFLNSGV I LRD+R GKE+ F YEGG+KAFVEYLN NKT ++  +F
Sbjct: 182 FEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNIF 241

Query: 242 HFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIEA 301
           +F+   E+DG+GVEVALQWND F EN+ CFTNNIPQRDGGTHLAGFR+A+TR LN Y++ 
Sbjct: 242 YFST--EKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDK 299

Query: 302 EGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFAD 361
           EG +KK K++ TGDDAREGL A++SVKVPDPKFSSQTKDKLVSSEVK+AVEQ+M +  A+
Sbjct: 300 EGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAE 359

Query: 362 FLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSE 421
           +LLENP +AK VVGK+IDAARAREAAR+AREMTRRKGALD+AGLPGKLADCQE+DPALSE
Sbjct: 360 YLLENPTDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSE 419

Query: 422 LYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIG 481
           LY+VEGDSAGGSAKQGRNR+ QAILPLKGKILNVEKARFDKMLSSQEV TLITALGCGIG
Sbjct: 420 LYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG 479

Query: 482 REEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVKR 541
           R+EYN DKLRYH+IIIMTDADVDGSHIRTLLLTFF+RQMPE++ERG++YIAQPPLYKVK+
Sbjct: 480 RDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKK 539

Query: 542 GKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLSR 601
           GKQEQYIKDD+AM++Y    AL+ A+LH N  AP L+G ALEKLV+EY      + R+ R
Sbjct: 540 GKQEQYIKDDEAMDQYQISIALDGATLHTNASAPALAGEALEKLVSEYNATQKMINRMER 599

Query: 602 LYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERHL 661
            YP+ + +  IY PT++  DL++E  +  W+    + L   E+ G  +K  +  + E++L
Sbjct: 600 RYPKAMLKELIYQPTLTEADLSDEQTVTRWVNALVSELNDKEQHGSQWKFDVHTNAEQNL 659

Query: 662 WLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISAF 721
           + P V +  HG+ +    + +F    +YR +  LG++L  LLE+ A++++GER++P+++F
Sbjct: 660 FEPIVRVRTHGVDTDYPLDHEFITGGEYRRICTLGEKLRGLLEEDAFIERGERRQPVASF 719

Query: 722 KDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFNT 781
           +  LDWL+ E  +  SIQRYKGLGEMNPEQLWETTMDP  RRML+VT++DAIAADQ+F T
Sbjct: 720 EQALDWLVKESRRGLSIQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFTT 779

Query: 782 LMGDAVEPRRDFIESNALAVSNLDV 806
           LMGDAVEPRR FIE NAL  +N+D+
Sbjct: 780 LMGDAVEPRRAFIEENALKAANIDI 804



>dbj|BAB38057.1| (AP002566) DNA gyrase subunit B GyrB [Escherichia coli O157:H7]
          Length = 804

 Score = 1125 bits (2911), Expect = 0.0
 Identities = 551/805 (68%), Positives = 667/805 (82%), Gaps = 4/805 (0%)

Query: 4   NNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEISI 63
           +N+YDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDN+IDEALAG+C EI +
Sbjct: 2   SNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIIV 61

Query: 64  TIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVGVS 123
           TIH D S++V+D+GRGIP  IH EEGVSAAEVIMTVLHAGGKFDDN+YKVSGGLHGVGVS
Sbjct: 62  TIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVS 121

Query: 124 VVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSNI-H 182
           VVNALS +L L I+R  K+  Q+Y HGVPQ PL   GET+ +GT V F PS ETF+N+  
Sbjct: 122 VVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLETFTNVTE 181

Query: 183 FSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVN-EVF 241
           F ++ILAKR+RELSFLNSGV I LRD+R GKE+ F YEGG+KAFVEYLN NKT ++  +F
Sbjct: 182 FEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNIF 241

Query: 242 HFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIEA 301
           +F+   E+DG+GVEVALQWND F EN+ CFTNNIPQRDGGTHLAGFR+A+TR LN Y++ 
Sbjct: 242 YFST--EKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDK 299

Query: 302 EGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFAD 361
           EG +KK K++ TGDDAREGL A++SVKVPDPKFSSQTKDKLVSSEVK+AVEQ+M +  A+
Sbjct: 300 EGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAE 359

Query: 362 FLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSE 421
           +LLENP +AK VVGK+IDAARAREAAR+AREMTRRKGALD+AGLPGKLADCQE+DPALSE
Sbjct: 360 YLLENPTDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSE 419

Query: 422 LYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIG 481
           LY+VEGDSAGGSAKQGRNR+ QAILPLKGKILNVEKARFDKMLSSQEV TLITALGCGIG
Sbjct: 420 LYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG 479

Query: 482 REEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVKR 541
           R+EYN DKLRYH+IIIMTDADVDGSHIRTLLLTFF+RQMPE++ERG++YIAQPPLYKVK+
Sbjct: 480 RDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKK 539

Query: 542 GKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLSR 601
           GKQEQYIKDD+AM++Y    AL+ A+LH N  AP L+G ALEKLV+EY      + R+ R
Sbjct: 540 GKQEQYIKDDEAMDQYQISIALDGATLHTNASAPALAGEALEKLVSEYNATQKMINRMER 599

Query: 602 LYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERHL 661
            YP+ + +  IY PT++  DL++E  +  W+    + L   E+ G  +K  +  + E++L
Sbjct: 600 RYPKAMLKELIYQPTLTEADLSDEQTVTRWVNALVSELNDKEQHGSQWKFDVHTNAEQNL 659

Query: 662 WLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISAF 721
           + P V +  HG+ +    + +F    +YR +  LG++L  LLE+ A++++GER++P+++F
Sbjct: 660 FEPIVRVRTHGVDTDYPLDHEFITGGEYRRICTLGEKLRGLLEEDAFIERGERRQPVASF 719

Query: 722 KDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFNT 781
           +  LDWL+ E  +  SIQRYKGLGEMNPEQLWETTMDP  RRML+VT++DAIAADQ+F T
Sbjct: 720 EQALDWLVKESRRGLSIQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFTT 779

Query: 782 LMGDAVEPRRDFIESNALAVSNLDV 806
           LMGDAVEPRR FIE NAL  +N+D+
Sbjct: 780 LMGDAVEPRRAFIEENALKAANIDI 804



>emb|CAA69221.1| (Y07916) subunit B of DNA gyrase [Salmonella typhimurium]
          Length = 804

 Score = 1124 bits (2907), Expect = 0.0
 Identities = 550/805 (68%), Positives = 666/805 (82%), Gaps = 4/805 (0%)

Query: 4   NNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEISI 63
           +N+YDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDN+IDEALAG+C +I +
Sbjct: 2   SNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKDIVV 61

Query: 64  TIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVGVS 123
           TIH D S++V D+GRGIP  IH EEGVSAAEVIMTVLHAGGKFDDN+YKVSGGLHGVGVS
Sbjct: 62  TIHADNSVSVTDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVS 121

Query: 124 VVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSNI-H 182
           VVNALS +L L I+R  K+  Q+Y HGVPQ PL   G+TD +GT V F PS ETF+N+  
Sbjct: 122 VVNALSQKLELVIQRDGKIHRQIYEHGVPQAPLAVTGDTDKTGTMVRFWPSHETFTNVTE 181

Query: 183 FSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVN-EVF 241
           F ++ILAKR+RELSFLNSGV I LRD+R GKE+ F YEGG+KAFVEYLN NKT ++  +F
Sbjct: 182 FEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNIF 241

Query: 242 HFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIEA 301
           +F+   E+DG+GVEVALQWND F EN+ CFTNNIPQRDGGTHLAGFR+A+TR LN Y++ 
Sbjct: 242 YFST--EKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDK 299

Query: 302 EGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFAD 361
           EG +KK K++ TGDDAREGL A++SVKVPDPKFSSQTKDKLVSSEVK+AVEQ+M +  A+
Sbjct: 300 EGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAE 359

Query: 362 FLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSE 421
           +LLENP +AK VVGK+IDAARAREAAR+AREMTRRKGALD+AGLPGKLADCQE+DPALSE
Sbjct: 360 YLLENPTDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSE 419

Query: 422 LYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIG 481
           LY+VEGDSAGGSAKQGRNR+ QAILPLKGKILNVEKARFDKMLSSQEV TLITALGCGIG
Sbjct: 420 LYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG 479

Query: 482 REEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVKR 541
           R+EYN DKLRYH+IIIMTDADVDGSHIRTLLLTFF+RQMPE++ERG++YIAQPPLYKVK+
Sbjct: 480 RDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKK 539

Query: 542 GKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLSR 601
           GKQEQYIKDD+AM++Y    AL+ A+LH N  AP L+G ALEKLV+EY      + R+ R
Sbjct: 540 GKQEQYIKDDEAMDQYQISIALDGATLHTNASAPALAGEALEKLVSEYNATQKMINRMER 599

Query: 602 LYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERHL 661
            YP+ + +  IY PT++  DL++E  +  W+    + L   E+ G  +K  +  + E++L
Sbjct: 600 RYPKAMLKELIYQPTLTEADLSDEQTVTRWVNALVSELNDKEQHGSQWKFDVHTNAEQNL 659

Query: 662 WLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISAF 721
           + P V +  HG+ +    + +F    +YR +  LG++L  LLE+ A++++GER++P+++F
Sbjct: 660 FEPIVRVRTHGVDTDYPLDHEFITGGEYRRICTLGEKLRGLLEEDAFIERGERRQPVASF 719

Query: 722 KDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFNT 781
           +  LDWL+ E  +  SIQRYKGLGEMNPEQLWETTMDP  RRML+VT++DAIAADQ+F T
Sbjct: 720 EQALDWLVKESRRGLSIQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFTT 779

Query: 782 LMGDAVEPRRDFIESNALAVSNLDV 806
           LMGDAVEPRR FIE NAL  +N+D+
Sbjct: 780 LMGDAVEPRRAFIEENALKAANIDI 804



>gb|AAC76722.1| (AE000447) DNA gyrase subunit B, type II topoisomerase, ATPase
           activity [Escherichia coli K12]
          Length = 804

 Score = 1124 bits (2906), Expect = 0.0
 Identities = 550/805 (68%), Positives = 666/805 (82%), Gaps = 4/805 (0%)

Query: 4   NNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEISI 63
           +N+YDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDN+IDEALAG+C EI +
Sbjct: 2   SNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIIV 61

Query: 64  TIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVGVS 123
           TIH D S++V+D+GRGIP  IH EEGVSAAEVIMTVLHAGGKFDDN+YKVSGGLHGVGVS
Sbjct: 62  TIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVS 121

Query: 124 VVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSNI-H 182
           VVNALS +L L I+R  K+  Q+Y HGVPQ PL   GET+ +GT V F PS ETF+N+  
Sbjct: 122 VVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLETFTNVTE 181

Query: 183 FSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVN-EVF 241
           F ++ILAKR+RELSFLNSGV I LRD+R GKE+ F YEGG+KAFVEYLN NKT ++  +F
Sbjct: 182 FEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNIF 241

Query: 242 HFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIEA 301
           +F+   E+DG+GVEVALQWND F EN+ CFTNNIPQRDGGTHLAGFR+A+TR LN Y++ 
Sbjct: 242 YFST--EKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDK 299

Query: 302 EGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFAD 361
           EG +KK K++ TGDDAREGL A++SVKVPDPKFSSQTKDKLVSSEVK+AVEQ+M +  A+
Sbjct: 300 EGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAE 359

Query: 362 FLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSE 421
           +LLENP +AK VVGK+IDAARAREA R+AREMTRRKGALD+AGLPGKLADCQE+DPALSE
Sbjct: 360 YLLENPTDAKIVVGKIIDAARAREAPRRAREMTRRKGALDLAGLPGKLADCQERDPALSE 419

Query: 422 LYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIG 481
           LY+VEGDSAGGSAKQGRNR+ QAILPLKGKILNVEKARFDKMLSSQEV TLITALGCGIG
Sbjct: 420 LYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG 479

Query: 482 REEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVKR 541
           R+EYN DKLRYH+IIIMTDADVDGSHIRTLLLTFF+RQMPE++ERG++YIAQPPLYKVK+
Sbjct: 480 RDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKK 539

Query: 542 GKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLSR 601
           GKQEQYIKDD+AM++Y    AL+ A+LH N  AP L+G ALEKLV+EY      + R+ R
Sbjct: 540 GKQEQYIKDDEAMDQYQISIALDGATLHTNASAPALAGEALEKLVSEYNATQKMINRMER 599

Query: 602 LYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERHL 661
            YP+ + +  IY PT++  DL++E  +  W+    + L   E+ G  +K  +  + E++L
Sbjct: 600 RYPKAMLKELIYQPTLTEADLSDEQTVTRWVNALVSELNDKEQHGSQWKFDVHTNAEQNL 659

Query: 662 WLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISAF 721
           + P V +  HG+ +    + +F    +YR +  LG++L  LLE+ A++++GER++P+++F
Sbjct: 660 FEPIVRVRTHGVDTDYPLDHEFITGGEYRRICTLGEKLRGLLEEDAFIERGERRQPVASF 719

Query: 722 KDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFNT 781
           +  LDWL+ E  +  SIQRYKGLGEMNPEQLWETTMDP  RRML+VT++DAIAADQ+F T
Sbjct: 720 EQALDWLVKESRRGLSIQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFTT 779

Query: 782 LMGDAVEPRRDFIESNALAVSNLDV 806
           LMGDAVEPRR FIE NAL  +N+D+
Sbjct: 780 LMGDAVEPRRAFIEENALKAANIDI 804



>emb|CAA69665.1| (Y08383) subunit B of DNA gyrase [Salmonella typhimurium]
          Length = 804

 Score = 1122 bits (2901), Expect = 0.0
 Identities = 549/805 (68%), Positives = 665/805 (82%), Gaps = 4/805 (0%)

Query: 4   NNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEISI 63
           +N+YDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDN+IDEALAG+C +I +
Sbjct: 2   SNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKDIVV 61

Query: 64  TIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVGVS 123
           TIH D S++V D+GRGIP  IH EEGVSAAEVIMTVLHAGGKFDDN+YKVSGGLHGVGVS
Sbjct: 62  TIHADNSVSVTDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVS 121

Query: 124 VVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSNI-H 182
           VVNALS +L L I+R  K+  Q+Y HGVPQ PL   G+TD +GT V F PS ETF+N+  
Sbjct: 122 VVNALSQKLELVIQRDGKIHRQIYEHGVPQAPLAVTGDTDKTGTMVRFWPSHETFTNVTE 181

Query: 183 FSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVN-EVF 241
           F ++ILAKR+RELSFLNSGV I LRD+R GKE+ F YEGG+KAFVEYLN NKT ++  +F
Sbjct: 182 FEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNIF 241

Query: 242 HFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIEA 301
           +F+   E+DG+GVEVALQWND F EN+ CFTNNIPQRDGGTHLAGFR+A+TR LN Y++ 
Sbjct: 242 YFST--EKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDK 299

Query: 302 EGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFAD 361
           EG +KK K++ TGDDAREGL A++SVKVPDPKFSSQTKDKLVSSEVK+AVEQ+M +  A+
Sbjct: 300 EGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAE 359

Query: 362 FLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSE 421
           +LLENP +AK VVGK+IDAARAREAAR+AREMTRRKGALD+AGLPGKLADCQE+DPALSE
Sbjct: 360 YLLENPTDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSE 419

Query: 422 LYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIG 481
           LY+VEGDSAGGSAKQGRNR+ QAILPLKGKILNVEKARFDKMLS QEV TLITALGCGIG
Sbjct: 420 LYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSFQEVATLITALGCGIG 479

Query: 482 REEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVKR 541
           R+EYN DKLRYH+IIIMTDADVDGSHIRTLLLTFF+RQMPE++ERG++YIAQPPLYKVK+
Sbjct: 480 RDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKK 539

Query: 542 GKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLSR 601
           GKQEQYIKDD+AM++Y    AL+ A+LH N  AP L+G ALEKLV+EY      + R+ R
Sbjct: 540 GKQEQYIKDDEAMDQYQISIALDGATLHTNASAPALAGEALEKLVSEYNATQKMINRMER 599

Query: 602 LYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERHL 661
            YP+ + +  IY PT++  DL++E  +  W+    + L   E+ G  +K  +  + E++L
Sbjct: 600 RYPKAMLKELIYQPTLTEADLSDEQTVTRWVNALVSELNDKEQHGSQWKFDVHTNAEQNL 659

Query: 662 WLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISAF 721
           + P V +  HG+ +    + +F    +YR +  LG++L  LLE+ A++++GER++P+++F
Sbjct: 660 FEPIVRVRTHGVDTDYPLDHEFITGGEYRRICTLGEKLRGLLEEDAFIERGERRQPVASF 719

Query: 722 KDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFNT 781
           +  LDWL+ E  +  SIQRYKGLGEMNPEQLWETTMDP  RRML+VT++DAIAADQ+F T
Sbjct: 720 EQALDWLVKESRRGLSIQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFTT 779

Query: 782 LMGDAVEPRRDFIESNALAVSNLDV 806
           LMGDAVEPRR FIE NAL  +N+D+
Sbjct: 780 LMGDAVEPRRAFIEENALKAANIDI 804



>gb|AAA62050.1| (L10328) DNA gyrase, subunit B [Escherichia coli]
          Length = 804

 Score = 1121 bits (2900), Expect = 0.0
 Identities = 549/805 (68%), Positives = 665/805 (82%), Gaps = 4/805 (0%)

Query: 4   NNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEISI 63
           +N+YDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDN+IDEALAG+C EI +
Sbjct: 2   SNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIIV 61

Query: 64  TIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVGVS 123
           TIH D S++V+D+GRGIP  IH EEGVSAAEVIMTVLHAGGKFDDN+YKVSGGLHGVGVS
Sbjct: 62  TIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVS 121

Query: 124 VVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSNI-H 182
           VVNALS +L L I+R  K+  Q+Y HGVPQ PL   GET+ +GT V F PS ETF+N+  
Sbjct: 122 VVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLETFTNVTE 181

Query: 183 FSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVN-EVF 241
           F ++ILAKR+RELSFLNSGV I LRD+R GKE+ F YEGG+KAFVEYLN NKT ++  +F
Sbjct: 182 FEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNIF 241

Query: 242 HFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIEA 301
           +F+   E+DG+GVEVALQWND F EN+ CFTNNIPQRDGGTHLAGFR+A+TR LN Y++ 
Sbjct: 242 YFST--EKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDK 299

Query: 302 EGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFAD 361
           EG +KK K++ TGDDAREGL A++SVKVPDPKFSSQTKDKLVSSEVK+AVEQ+M +  A+
Sbjct: 300 EGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAE 359

Query: 362 FLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSE 421
           +LLENP +AK VVGK+IDAARAREA R+AREMTRRKGALD+AGLPGKLADCQE+DPALSE
Sbjct: 360 YLLENPTDAKIVVGKIIDAARAREAPRRAREMTRRKGALDLAGLPGKLADCQERDPALSE 419

Query: 422 LYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIG 481
           LY+VEGDSAGGSAKQGRNR+ QAILPLKGKILNVEKARFDKMLSSQEV TLITALGCGIG
Sbjct: 420 LYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG 479

Query: 482 REEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVKR 541
           R+EYN DKLRYH+IIIMTDADVDGSHIRTLLLTFF+RQMPE++ERG++YIAQPPLYKVK+
Sbjct: 480 RDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKK 539

Query: 542 GKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLSR 601
           GKQEQYIKDD+AM++Y    AL+ A+LH N  AP L+G ALEKLV+EY      + R+ R
Sbjct: 540 GKQEQYIKDDEAMDQYQISIALDGATLHTNASAPALAGEALEKLVSEYNATQKMINRMER 599

Query: 602 LYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERHL 661
            YP+ + +  IY PT++  DL++E  +  W+    + L   E+    +K  +  + E++L
Sbjct: 600 RYPKAMLKELIYQPTLTEADLSDEQTVTRWVNALVSELNDKEQHXSQWKFDVHTNAEQNL 659

Query: 662 WLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISAF 721
           + P V +  HG+ +    + +F    +YR +  LG++L  LLE+ A++++GER++P+++F
Sbjct: 660 FEPIVRVRTHGVDTDYPLDHEFITGGEYRRICTLGEKLRGLLEEDAFIERGERRQPVASF 719

Query: 722 KDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFNT 781
           +  LDWL+ E  +  SIQRYKGLGEMNPEQLWETTMDP  RRML+VT++DAIAADQ+F T
Sbjct: 720 EQALDWLVKESRRGLSIQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFTT 779

Query: 782 LMGDAVEPRRDFIESNALAVSNLDV 806
           LMGDAVEPRR FIE NAL  +N+D+
Sbjct: 780 LMGDAVEPRRXFIEENALKAANIDI 804



>gb|AAG58896.1|AE005601_2 (AE005601) DNA gyrase subunit B, type II topoisomerase, ATPase
           activity [Escherichia coli O157:H7 EDL933]
          Length = 804

 Score = 1121 bits (2899), Expect = 0.0
 Identities = 549/805 (68%), Positives = 665/805 (82%), Gaps = 4/805 (0%)

Query: 4   NNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEISI 63
           +N+YDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDN+IDEALAG+C EI +
Sbjct: 2   SNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIIV 61

Query: 64  TIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVGVS 123
           TIH D S++V+D+GRGIP  IH EEGVSAAEVIMTVLHAGGKFDDN+YKVSGGLHGVGVS
Sbjct: 62  TIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVS 121

Query: 124 VVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSNI-H 182
           VVNALS +L L I+R  K+  Q+Y HGVPQ PL   GET+ +GT V F PS ETF+N+  
Sbjct: 122 VVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLETFTNVTE 181

Query: 183 FSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVN-EVF 241
           F ++ILAKR+RELSFLNSGV I LRD+R GKE+ F YEGG+KAFVEYLN NKT ++  +F
Sbjct: 182 FEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNIF 241

Query: 242 HFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIEA 301
           +F+   E+DG+GVEVALQWND F EN+ CFTNNIPQRDGGTHLAGFR+A+TR LN Y++ 
Sbjct: 242 YFST--EKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDK 299

Query: 302 EGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFAD 361
           EG +KK K++ TGDDAREGL A++SVKVPDPKFSSQTKDKLVSSEVK+AVEQ+M +  A+
Sbjct: 300 EGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAE 359

Query: 362 FLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSE 421
           +LLENP +AK VVGK+ DAARAREAAR+AREMTRRKGALD+AGLPGKLADCQE+DPALSE
Sbjct: 360 YLLENPTDAKIVVGKIXDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSE 419

Query: 422 LYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIG 481
           LY+VEG SAGGSAKQGRNR+ QAILPLKGKILNVEKARFDKMLSSQEV TLITALGCGIG
Sbjct: 420 LYLVEGXSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG 479

Query: 482 REEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVKR 541
           R+EYN DKLRYH+IIIMTDADVDGSHIRTLLLTFF+RQMPE++ERG++YIAQPPLYKVK+
Sbjct: 480 RDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKK 539

Query: 542 GKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLSR 601
           GKQEQYIKDD+AM++Y    AL+ A+LH N  AP L+G ALEKLV+EY      + R+ R
Sbjct: 540 GKQEQYIKDDEAMDQYQISIALDGATLHTNASAPALAGEALEKLVSEYNATQKMINRMER 599

Query: 602 LYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERHL 661
            YP+ + +  IY PT++  DL++E  +  W+    + L   E+ G  +K  +  + E++L
Sbjct: 600 RYPKAMLKELIYQPTLTEADLSDEQTVTRWVNALVSELNDKEQHGSQWKFDVHTNAEQNL 659

Query: 662 WLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISAF 721
           + P V +  HG+ +    + +F    +YR +  LG++L  LLE+ A++++GER++P+++F
Sbjct: 660 FEPIVRVRTHGVDTDYPLDHEFITGGEYRRICTLGEKLRGLLEEDAFIERGERRQPVASF 719

Query: 722 KDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFNT 781
           +  LDWL+ E  +  SIQRYKGLGEMNPEQLWETTMDP  RRML+VT++DAIAADQ+F T
Sbjct: 720 EQALDWLVKESRRGLSIQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFTT 779

Query: 782 LMGDAVEPRRDFIESNALAVSNLDV 806
           LMGDAVEPRR FIE NAL  +N+D+
Sbjct: 780 LMGDAVEPRRAFIEENALKAANIDI 804



>gb|AAL22694.1| (AE008878) DNA gyrase, subunit B [Salmonella typhimurium LT2]
          Length = 804

 Score = 1120 bits (2896), Expect = 0.0
 Identities = 546/805 (67%), Positives = 667/805 (82%), Gaps = 4/805 (0%)

Query: 4   NNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEISI 63
           +N+YDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDN+IDEALAG+C +I +
Sbjct: 2   SNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKDIVV 61

Query: 64  TIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVGVS 123
           TIH D S++V D+GRGIP  IH EEGVSAAEVIMTVLHAGGKFDDN+YKVSGGLHGVGVS
Sbjct: 62  TIHADNSVSVTDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVS 121

Query: 124 VVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSNI-H 182
           VVNALS +L L I+R  K+  Q+Y HGVPQ PL   G+TD +GT V F PS ETF+N+  
Sbjct: 122 VVNALSQKLELVIQRDGKIHRQIYEHGVPQAPLAVTGDTDKTGTMVRFWPSHETFTNVTE 181

Query: 183 FSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVN-EVF 241
           F ++ILAKR+RELSFLNSGV I LRD+R GKE+ F YEGG+KAFVEYLN NKT ++  +F
Sbjct: 182 FEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNIF 241

Query: 242 HFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIEA 301
           +F+   E+DG+GVEVALQWND F EN+ CFTNNIPQRDGGTHLAGFR+A+TR LN Y++ 
Sbjct: 242 YFST--EKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDK 299

Query: 302 EGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFAD 361
           EG +KK K++ TGDDAREGL A++SVKVPDPKFSSQTKDKLVSSEVK+AVEQ+M +  ++
Sbjct: 300 EGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLSE 359

Query: 362 FLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSE 421
           +LLENP++AK VVGK+IDAARAREAAR+AREMTRRKGALD+AGLPGKLADCQE+DPALSE
Sbjct: 360 YLLENPSDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSE 419

Query: 422 LYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIG 481
           LY+VEGDSAGGSAKQGRNR+ QAILPLKGKILNVEKARFDKMLSSQEV TLITALGCGIG
Sbjct: 420 LYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG 479

Query: 482 REEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVKR 541
           R+EYN DKLRYH+IIIMTDADVDGSHIRTLLLTFF+RQMPE++ERG++YIAQPPLYKVK+
Sbjct: 480 RDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKK 539

Query: 542 GKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLSR 601
           GKQEQYIKDD+AM++Y    AL+ A+LH N HAP LSG ALEKLV+EY      + R+ R
Sbjct: 540 GKQEQYIKDDEAMDQYQISIALDGATLHANAHAPALSGEALEKLVSEYNATQKMIGRMER 599

Query: 602 LYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERHL 661
            +P+ L +  +Y PT++  DL++E  +  W+      L   E+ G  +K  +  + E++L
Sbjct: 600 RFPKALLKELVYQPTLTEADLSDEQTVTRWVNALITELNEKEQHGSQWKFDVHTNTEQNL 659

Query: 662 WLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISAF 721
           + P V +  HG+ +    + +F    +YR +  LG++L  L+E+ A++++GER++P+++F
Sbjct: 660 FEPIVRVRTHGVDTDYPLDHEFVTGAEYRRICTLGEKLRGLIEEDAFIERGERRQPVTSF 719

Query: 722 KDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFNT 781
           +  L+WL+ E  +  +IQRYKGLGEMNP+QLWETTMDP  RRML+VT++DAIAADQ+F T
Sbjct: 720 EQALEWLVKESRRGLAIQRYKGLGEMNPDQLWETTMDPESRRMLRVTVKDAIAADQLFTT 779

Query: 782 LMGDAVEPRRDFIESNALAVSNLDV 806
           LMGDAVEPRR FIE NAL  +N+D+
Sbjct: 780 LMGDAVEPRRAFIEENALKAANIDI 804



>gb|AAO71180.1| (AE016846) DNA gyrase subunit B [Salmonella enterica subsp.
           enterica serovar Typhi Ty2]
          Length = 804

 Score = 1120 bits (2896), Expect = 0.0
 Identities = 546/805 (67%), Positives = 667/805 (82%), Gaps = 4/805 (0%)

Query: 4   NNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEISI 63
           +N+YDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDN+IDEALAG+C +I +
Sbjct: 2   SNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKDIVV 61

Query: 64  TIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVGVS 123
           TIH D S++V D+GRGIP  IH EEGVSAAEVIMTVLHAGGKFDDN+YKVSGGLHGVGVS
Sbjct: 62  TIHADNSVSVTDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVS 121

Query: 124 VVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSNI-H 182
           VVNALS +L L I+R  K+  Q+Y HGVPQ PL   G+TD +GT V F PS ETF+N+  
Sbjct: 122 VVNALSQKLELVIQRDGKIHRQIYEHGVPQAPLAVTGDTDKTGTMVRFWPSHETFTNVTE 181

Query: 183 FSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVN-EVF 241
           F ++ILAKR+RELSFLNSGV I LRD+R GKE+ F YEGG+KAFVEYLN NKT ++  +F
Sbjct: 182 FEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNIF 241

Query: 242 HFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIEA 301
           +F+   E+DG+GVEVALQWND F EN+ CFTNNIPQRDGGTHLAGFR+A+TR LN Y++ 
Sbjct: 242 YFST--EKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDK 299

Query: 302 EGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFAD 361
           EG +KK K++ TGDDAREGL A++SVKVPDPKFSSQTKDKLVSSEVK+AVEQ+M +  ++
Sbjct: 300 EGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLSE 359

Query: 362 FLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSE 421
           +LLENP++AK VVGK+IDAARAREAAR+AREMTRRKGALD+AGLPGKLADCQE+DPALSE
Sbjct: 360 YLLENPSDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSE 419

Query: 422 LYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIG 481
           LY+VEGDSAGGSAKQGRNR+ QAILPLKGKILNVEKARFDKMLSSQEV TLITALGCGIG
Sbjct: 420 LYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG 479

Query: 482 REEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVKR 541
           R+EYN DKLRYH+IIIMTDADVDGSHIRTLLLTFF+RQMPE++ERG++YIAQPPLYKVK+
Sbjct: 480 RDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKK 539

Query: 542 GKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLSR 601
           GKQEQYIKDD+AM++Y    AL+ A+LH N HAP LSG ALEKLV+EY      + R+ R
Sbjct: 540 GKQEQYIKDDEAMDQYQISIALDGATLHANAHAPALSGEALEKLVSEYNATQKMIGRMER 599

Query: 602 LYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERHL 661
            +P+ L +  +Y PT++  DL++E  +  W+      L   E+ G  +K  +  + E++L
Sbjct: 600 RFPKALLKELVYQPTLTEADLSDEQTVTRWVNALITELNEKEQHGSQWKFDVHTNTEQNL 659

Query: 662 WLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISAF 721
           + P V +  HG+ +    + +F    +YR +  LG++L  L+E+ A++++GER++P+++F
Sbjct: 660 FEPIVRVRTHGVDTDYPLDHEFVTGAEYRRICTLGEKLRGLIEEDAFIERGERRQPVTSF 719

Query: 722 KDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFNT 781
           +  L+WL+ E  +  +IQRYKGLGEMNP+QLWETTMDP  RRML+VT++DAIAADQ+F T
Sbjct: 720 EQALEWLVKESRRGLAIQRYKGLGEMNPDQLWETTMDPESRRMLRVTVKDAIAADQLFTT 779

Query: 782 LMGDAVEPRRDFIESNALAVSNLDV 806
           LMGDAVEPRR FIE NAL  +N+D+
Sbjct: 780 LMGDAVEPRRAFIEENALKAANIDI 804



>emb|CAD03160.1| (AL627280) DNA gyrase subunit B [Salmonella enterica subsp.
           enterica serovar Typhi]
          Length = 804

 Score = 1120 bits (2896), Expect = 0.0
 Identities = 546/805 (67%), Positives = 667/805 (82%), Gaps = 4/805 (0%)

Query: 4   NNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEISI 63
           +N+YDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDN+IDEALAG+C +I +
Sbjct: 2   SNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKDIVV 61

Query: 64  TIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVGVS 123
           TIH D S++V D+GRGIP  IH EEGVSAAEVIMTVLHAGGKFDDN+YKVSGGLHGVGVS
Sbjct: 62  TIHADNSVSVTDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVS 121

Query: 124 VVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSNI-H 182
           VVNALS +L L I+R  K+  Q+Y HGVPQ PL   G+TD +GT V F PS ETF+N+  
Sbjct: 122 VVNALSQKLELVIQRDGKIHRQIYEHGVPQAPLAVTGDTDKTGTMVRFWPSHETFTNVTE 181

Query: 183 FSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVN-EVF 241
           F ++ILAKR+RELSFLNSGV I LRD+R GKE+ F YEGG+KAFVEYLN NKT ++  +F
Sbjct: 182 FEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNIF 241

Query: 242 HFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIEA 301
           +F+   E+DG+GVEVALQWND F EN+ CFTNNIPQRDGGTHLAGFR+A+TR LN Y++ 
Sbjct: 242 YFST--EKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDK 299

Query: 302 EGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFAD 361
           EG +KK K++ TGDDAREGL A++SVKVPDPKFSSQTKDKLVSSEVK+AVEQ+M +  ++
Sbjct: 300 EGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLSE 359

Query: 362 FLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSE 421
           +LLENP++AK VVGK+IDAARAREAAR+AREMTRRKGALD+AGLPGKLADCQE+DPALSE
Sbjct: 360 YLLENPSDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSE 419

Query: 422 LYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIG 481
           LY+VEGDSAGGSAKQGRNR+ QAILPLKGKILNVEKARFDKMLSSQEV TLITALGCGIG
Sbjct: 420 LYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG 479

Query: 482 REEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVKR 541
           R+EYN DKLRYH+IIIMTDADVDGSHIRTLLLTFF+RQMPE++ERG++YIAQPPLYKVK+
Sbjct: 480 RDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKK 539

Query: 542 GKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLSR 601
           GKQEQYIKDD+AM++Y    AL+ A+LH N HAP LSG ALEKLV+EY      + R+ R
Sbjct: 540 GKQEQYIKDDEAMDQYQISIALDGATLHANAHAPALSGEALEKLVSEYNATQKMIGRMER 599

Query: 602 LYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERHL 661
            +P+ L +  +Y PT++  DL++E  +  W+      L   E+ G  +K  +  + E++L
Sbjct: 600 RFPKALLKELVYQPTLTEADLSDEQTVTRWVNALITELNEKEQHGSQWKFDVHTNTEQNL 659

Query: 662 WLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISAF 721
           + P V +  HG+ +    + +F    +YR +  LG++L  L+E+ A++++GER++P+++F
Sbjct: 660 FEPIVRVRTHGVDTDYPLDHEFVTGAEYRRICTLGEKLRGLIEEDAFIERGERRQPVTSF 719

Query: 722 KDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFNT 781
           +  L+WL+ E  +  +IQRYKGLGEMNP+QLWETTMDP  RRML+VT++DAIAADQ+F T
Sbjct: 720 EQALEWLVKESRRGLAIQRYKGLGEMNPDQLWETTMDPESRRMLRVTVKDAIAADQLFTT 779

Query: 782 LMGDAVEPRRDFIESNALAVSNLDV 806
           LMGDAVEPRR FIE NAL  +N+D+
Sbjct: 780 LMGDAVEPRRAFIEENALKAANIDI 804



>dbj|BAA20341.1| (D87842) DNA gyrase subunit B [Escherichia coli]
          Length = 804

 Score = 1119 bits (2895), Expect = 0.0
 Identities = 549/805 (68%), Positives = 665/805 (82%), Gaps = 4/805 (0%)

Query: 4   NNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEISI 63
           +N+YDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDN+IDEALAG+C EI +
Sbjct: 2   SNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIIV 61

Query: 64  TIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVGVS 123
           TIH D S++V+D+GRGIP  IH EEGVSAAEVIMTVLHAGGKFDDN+YKVSGGLHGVGVS
Sbjct: 62  TIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVS 121

Query: 124 VVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSNI-H 182
           VVNALS +L L I+R  K+  Q+Y HGVPQ PL   GET+ +GT V F PS ETF+N+  
Sbjct: 122 VVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLETFTNVTE 181

Query: 183 FSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVN-EVF 241
           F ++ILAKR+RELSFLNSGV I LRD+R GKE+ F YEGG+KAFVEYLN NKT ++  +F
Sbjct: 182 FEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNIF 241

Query: 242 HFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIEA 301
           +F+   E+DG+GVEVALQWND F EN+ CFTNNIPQRDGGTHLAGFR+A+TR LN Y++ 
Sbjct: 242 YFST--EKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDK 299

Query: 302 EGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFAD 361
           EG +KK K++ TGDDAREGL A++SVKVPDPKFSSQTKDKLVSSEVK+AVEQ+M +  A+
Sbjct: 300 EGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAE 359

Query: 362 FLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSE 421
           +LLENP +AK VVGK+IDAARAREAAR+AREMTRRKGALD+AGLPGKLADCQE+DPALSE
Sbjct: 360 YLLENPTDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSE 419

Query: 422 LYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIG 481
           LY+VEGDSAGGSAKQG NR+ QAILPLKGKILNVEKARFDKMLSSQEV TLITALGCGIG
Sbjct: 420 LYLVEGDSAGGSAKQGGNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG 479

Query: 482 REEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVKR 541
           R+EYN DKLRYH+IIIMTDADVDGSHIRTLLLTFF+RQMPE++ERG++YIAQPPLYKVK+
Sbjct: 480 RDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKK 539

Query: 542 GKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLSR 601
           GKQEQYIKDD+AM++Y    AL+ A+LH N  AP L+G ALEKLV+EY      + R+ R
Sbjct: 540 GKQEQYIKDDEAMDQYQISIALDGATLHTNASAPALAGEALEKLVSEYNATQKMINRMER 599

Query: 602 LYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERHL 661
            YP+ + +  IY PT++  DL++E  +  W+    + L   E+ G  +K  +  + E++L
Sbjct: 600 RYPKAMLKELIYQPTLTEADLSDEQTVTRWVNALVSELNDKEQHGSQWKFDVHTNAEQNL 659

Query: 662 WLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISAF 721
           + P V +  HG+ +    + +F    +YR +  LG++L  LLE+ A++++GER++P+++F
Sbjct: 660 FEPIVRVRTHGVDTDYPLDHEFITGGEYRRICTLGEKLRGLLEEDAFIERGERRQPVASF 719

Query: 722 KDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFNT 781
           +  LDWL+ E  +  SIQRYKGLGEMNPEQLWETTMDP   RML+VT++DAIAADQ+F T
Sbjct: 720 EQALDWLVKESRRGLSIQRYKGLGEMNPEQLWETTMDPERCRMLRVTVKDAIAADQLFTT 779

Query: 782 LMGDAVEPRRDFIESNALAVSNLDV 806
           LMGDAVEPRR FIE NAL  +N+D+
Sbjct: 780 LMGDAVEPRRAFIEENALKAANIDI 804



>gb|AAF93193.1| (AE004093) DNA gyrase, subunit B [Vibrio cholerae]
          Length = 805

 Score = 1119 bits (2894), Expect = 0.0
 Identities = 557/805 (69%), Positives = 659/805 (81%), Gaps = 3/805 (0%)

Query: 4   NNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEISI 63
           +N YDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYC +I +
Sbjct: 2   SNNYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCKDIVV 61

Query: 64  TIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVGVS 123
           TIH D S++V D+GRGIP ++H EE VSAAEVIMTVLHAGGKFDDN+YKVSGGLHGVGVS
Sbjct: 62  TIHEDNSVSVSDDGRGIPTEMHPEEKVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVS 121

Query: 124 VVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSNIHF 183
           VVNALS ++ LTI R  K+  Q YHHGVPQ PL  VGET+ +GT V F PS +TF+NI F
Sbjct: 122 VVNALSEKVLLTIYRGGKIHSQTYHHGVPQAPLAVVGETERTGTTVRFWPSAQTFTNIEF 181

Query: 184 SWDILAKRIRELSFLNSGVGILLRDERT-GKEELFKYEGGLKAFVEYLNTNKTAVNE-VF 241
            +DILAKR+RELSFLNSGV I L DER   K++ F YEGG++AFV +LN NKT ++E VF
Sbjct: 182 HYDILAKRLRELSFLNSGVSIKLTDEREEDKKDHFMYEGGIQAFVTHLNRNKTPIHEKVF 241

Query: 242 HFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIEA 301
           HFN +RE DG+ VEVA+QWND F EN+ CFTNNIPQRDGGTHLAGFR ALTR LNNY++ 
Sbjct: 242 HFNQERE-DGISVEVAMQWNDGFQENIYCFTNNIPQRDGGTHLAGFRGALTRTLNNYMDK 300

Query: 302 EGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFAD 361
           EG +KK + AT+GDDAREGLTA++SVKVPDPKFSSQTKDKLVSSEVK+AVE  M +  AD
Sbjct: 301 EGFSKKAQAATSGDDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVKSAVESAMNEKLAD 360

Query: 362 FLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSE 421
           FL ENP+EAK V  K+IDAARAREAARKAREMTRRKGALD+AGLPGKLADCQEKDPALSE
Sbjct: 361 FLAENPSEAKNVCSKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQEKDPALSE 420

Query: 422 LYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIG 481
           LYIVEGDSAGGSAKQGRNR+ QAILPLKGKILNVEKARFDKMLSSQEV TLITALGCGIG
Sbjct: 421 LYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG 480

Query: 482 REEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVKR 541
           R+EYN DKLRYHNIIIMTDADVDGSHIRTLLLTFF+RQMPELIERGYIYIAQPPLYKVK+
Sbjct: 481 RDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYIYIAQPPLYKVKK 540

Query: 542 GKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLSR 601
           GKQEQYIKD++AM +Y    A++ A LHVN  AP L+G  LEKLV +Y   I  ++R+SR
Sbjct: 541 GKQEQYIKDEEAMNQYQVALAMDGAELHVNADAPALAGEPLEKLVQQYNAAIKLVERMSR 600

Query: 602 LYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERHL 661
            YP  +    IY+P ++ +  A+++A++ W ++   +L A E     Y   +  + E ++
Sbjct: 601 RYPYAMLHELIYVPRINAELCADKAAVEAWTQRLVEQLNAKEVGASQYSVLVEHNAELNV 660

Query: 662 WLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISAF 721
           +LP++++  HG++     + D   S +Y  ++ L + L+ L+E GA++++GER +PIS+F
Sbjct: 661 YLPKIQVRTHGVTHEYLLSADLINSKEYAKLADLSEALDGLIEAGAFIKRGERVQPISSF 720

Query: 722 KDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFNT 781
              LDWL+ E  +  SIQRYKGLGEMNP+QLWETTMDP  RRM++VTIEDA+ AD++F T
Sbjct: 721 AAALDWLIKESRRGLSIQRYKGLGEMNPDQLWETTMDPETRRMMQVTIEDAVGADELFTT 780

Query: 782 LMGDAVEPRRDFIESNALAVSNLDV 806
           LMGD VEPRR FIE+NAL V+NLDV
Sbjct: 781 LMGDQVEPRRAFIETNALKVANLDV 805



>gb|AAO09485.1|AE016800_90 (AE016800) DNA gyrase, subunit B [Vibrio vulnificus CMCP6]
          Length = 805

 Score = 1115 bits (2883), Expect = 0.0
 Identities = 556/805 (69%), Positives = 653/805 (81%), Gaps = 3/805 (0%)

Query: 4   NNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEISI 63
           +N YDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAG+C +I +
Sbjct: 2   SNNYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCKDIVV 61

Query: 64  TIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVGVS 123
           TIH D S++V D+GRGIP ++H EE VSAAEVIMTVLHAGGKFDDN+YKVSGGLHGVGVS
Sbjct: 62  TIHEDNSVSVSDDGRGIPTEMHPEENVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVS 121

Query: 124 VVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSNIHF 183
           VVNALS ++ LTI R      Q Y HGVP  PL  +G+T+ +GT V F PS ETF+NI F
Sbjct: 122 VVNALSEKVLLTIHRGGHTHSQTYRHGVPDAPLAIIGDTEKTGTTVRFWPSAETFTNIEF 181

Query: 184 SWDILAKRIRELSFLNSGVGILLRDERT-GKEELFKYEGGLKAFVEYLNTNKTAVNE-VF 241
            +DILAKR+RELSFLNSGV I L DER   K++ F YEGG++AFV +LN NKT ++E VF
Sbjct: 182 HYDILAKRLRELSFLNSGVSIKLFDEREEDKKDHFMYEGGIQAFVTHLNRNKTPIHEKVF 241

Query: 242 HFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIEA 301
           HFN +RE DG+ VEVA+QWND F EN+ CFTNNIPQRDGGTHLAGFR+ALTR LN+Y++ 
Sbjct: 242 HFNAERE-DGIAVEVAMQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAALTRTLNSYMDK 300

Query: 302 EGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFAD 361
           EG +KK K AT+GDDAREGLTA++SVKVPDPKFSSQTKDKLVSSEVK+AVE  M     D
Sbjct: 301 EGYSKKAKTATSGDDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVKSAVESFMADKLND 360

Query: 362 FLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSE 421
           FL E+P+EAK V  K+IDAARAREAARKAREMTRRKGALD+AGLPGKLADCQEKDPALSE
Sbjct: 361 FLAEHPSEAKTVCSKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQEKDPALSE 420

Query: 422 LYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIG 481
           LYIVEGDSAGGSAKQGRNR+ QAILPLKGKILNVEKARFDKMLSSQEV TLITALGCGIG
Sbjct: 421 LYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG 480

Query: 482 REEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVKR 541
           R+EYN DKLRYHNIIIMTDADVDGSHIRTLLLTFF+RQMPELIERGY+YIAQPPLYKVK+
Sbjct: 481 RDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYVYIAQPPLYKVKK 540

Query: 542 GKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLSR 601
           GKQEQYIKD+ AM +Y    AL++A+LHVN  AP L+G ALEKLV +Y   I  + R+SR
Sbjct: 541 GKQEQYIKDEDAMNQYQISLALDNAALHVNPDAPALAGEALEKLVQQYNAAIKLVDRMSR 600

Query: 602 LYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERHL 661
            YP+ L    IY+P +S    A+++AM  W E+   +L A E     Y   +  D ER L
Sbjct: 601 RYPRALIHELIYVPRLSETQFADQAAMAAWTEQLVTQLNAKEVGASQYSFEIEHDAERGL 660

Query: 662 WLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISAF 721
           + P++ +  HG+      + D   S +Y+ ++ L D L+ L+E+GAY+Q+GER +P+++F
Sbjct: 661 FSPKIVVRTHGVMHEYPLSVDLINSKEYQKLAELADALDGLIEEGAYIQRGERTQPVNSF 720

Query: 722 KDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFNT 781
              L+WL+ E  +  S+QRYKGLGEMNP+QLWETTMDP  RRM++VTIEDA+ AD++F T
Sbjct: 721 ASALEWLIKESRRGLSLQRYKGLGEMNPDQLWETTMDPETRRMMRVTIEDAVGADELFTT 780

Query: 782 LMGDAVEPRRDFIESNALAVSNLDV 806
           LMGD VEPRR+FIE NAL V+NLDV
Sbjct: 781 LMGDQVEPRRNFIEENALKVANLDV 805



>gb|AAK03560.1| (AE006184) GyrB [Pasteurella multocida]
          Length = 806

 Score = 1110 bits (2870), Expect = 0.0
 Identities = 556/807 (68%), Positives = 665/807 (82%), Gaps = 7/807 (0%)

Query: 4   NNT---YDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSE 60
           NNT   Y ++SIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGY  +
Sbjct: 3   NNTPENYGANSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYAKD 62

Query: 61  ISITIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGV 120
           I++TIHTD S++V+D+GRGIPVDIH EEGVSAAEVIMTVLHAGGKFDDN+YKVSGGLHGV
Sbjct: 63  ITVTIHTDNSVSVQDDGRGIPVDIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV 122

Query: 121 GVSVVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSN 180
           GVSVVNALS +L+LTIRR  KV EQ+YH G PQ PL  +GETD +GT V F PSP  F+N
Sbjct: 123 GVSVVNALSDKLQLTIRRQGKVHEQIYHLGEPQAPLAAIGETDQTGTTVRFWPSPTIFNN 182

Query: 181 IHFSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVNEV 240
           I F +DILAKR+RELSFLNSGV I L D+R  +++ F YEGG++AFVEYLN NK  +++ 
Sbjct: 183 IEFEYDILAKRLRELSFLNSGVSIKLFDKRNDRQDHFHYEGGIQAFVEYLNRNKNPIHQK 242

Query: 241 -FHFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYI 299
            F+F+   E+DG+GVEV++QWNDSFNEN+ CFTNNIPQRDGGTHLAGFR ALTR+LNNY+
Sbjct: 243 PFYFST--EKDGIGVEVSMQWNDSFNENVYCFTNNIPQRDGGTHLAGFRGALTRSLNNYM 300

Query: 300 EAEGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYF 359
           + EG  KK K+AT+GDDAREGL AIISVKVPDPKFSSQTKDKLVSSEVK+AVE  M +Y 
Sbjct: 301 DNEGHNKKSKVATSGDDAREGLVAIISVKVPDPKFSSQTKDKLVSSEVKSAVESVMNEYL 360

Query: 360 ADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPAL 419
             +LLENP++AK +VGK+IDAARAREAARKAREMTRRKGALD+ GLPGKLADCQE+DPAL
Sbjct: 361 QQYLLENPSDAKIIVGKIIDAARAREAARKAREMTRRKGALDLGGLPGKLADCQERDPAL 420

Query: 420 SELYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCG 479
           SELY+VEGDSAGGSAKQGRNR+ QAILPLKGKILNVEKARFDKMLSS EVGTLITALGCG
Sbjct: 421 SELYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSAEVGTLITALGCG 480

Query: 480 IGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKV 539
           IGR+EYN +KLRYH+IIIMTDADVDG+HIRTLLLTFF+RQMPELIERG++YIAQPPLYKV
Sbjct: 481 IGRDEYNPEKLRYHSIIIMTDADVDGAHIRTLLLTFFYRQMPELIERGHVYIAQPPLYKV 540

Query: 540 KRGKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRL 599
           K+GKQEQYIKDD+AM +Y    ALE+A+L+VNE+AP +SG ALE LV+EY  V   + RL
Sbjct: 541 KKGKQEQYIKDDEAMVQYEVALALENAALYVNENAPAMSGLALESLVSEYNAVQKMIGRL 600

Query: 600 SRLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRER 659
           +R YP+ + +  IY P ++ + +A++  ++ W+     +L A E +G  Y      + ER
Sbjct: 601 TRYYPEVVLKELIYHPELTSELMADQKEVENWIATLVDKLVAKESNGNHYSYRTVFNSER 660

Query: 660 HLWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPIS 719
           HL    + +  HG+ +    N  F   ++Y  +  LG QL  L+E+GAY+ +GERK  +S
Sbjct: 661 HLHEAVLTVRTHGIDTDYFLNFQFATGSEYARIVKLGKQLTGLIEEGAYIMRGERKLEVS 720

Query: 720 AFKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIF 779
           +F+  ++WL+ E  +   +QRYKGLGEMNPEQLWETTMDPN RRMLKV+I+DA+AAD +F
Sbjct: 721 SFEQAIEWLVKESRRGLMVQRYKGLGEMNPEQLWETTMDPNARRMLKVSIKDAVAADLLF 780

Query: 780 NTLMGDAVEPRRDFIESNALAVSNLDV 806
            TLMGD VEPRR+FIESNAL  +NLD+
Sbjct: 781 TTLMGDEVEPRREFIESNALH-ANLDI 806



>dbj|BAC58277.1| (AP005073) DNA gyrase, subunit B [Vibrio parahaemolyticus]
          Length = 805

 Score = 1103 bits (2854), Expect = 0.0
 Identities = 555/808 (68%), Positives = 657/808 (81%), Gaps = 5/808 (0%)

Query: 1   MSENNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSE 60
           MSEN  YDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAG+C +
Sbjct: 1   MSEN--YDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCKD 58

Query: 61  ISITIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGV 120
           I +TIH D S++V D+GRGIP ++H EE VSAAEVIMTVLHAGGKFDDN+YKVSGGLHGV
Sbjct: 59  IVVTIHEDNSVSVSDDGRGIPTEMHPEEKVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV 118

Query: 121 GVSVVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSN 180
           GVSVVNALS ++ LTI R   +  Q Y HG P+ PL  VG+TD +GT++ F PS ETFSN
Sbjct: 119 GVSVVNALSEKVVLTIHRGGHIHTQTYRHGEPEAPLAVVGDTDKTGTQIRFWPSAETFSN 178

Query: 181 IHFSWDILAKRIRELSFLNSGVGILLRDERTG-KEELFKYEGGLKAFVEYLNTNKTAVNE 239
             F +DILAKR+RELSFLNSGV I L DER   K++ F YEGG++AFV++LNTNKT + E
Sbjct: 179 TEFHYDILAKRLRELSFLNSGVSIKLIDEREADKQDHFMYEGGIQAFVQHLNTNKTPIIE 238

Query: 240 -VFHFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNY 298
            +FHF+++RE DG+ VEVA+QWND F EN+ CFTNNIPQRDGGTHLAGFR+ALTR LN++
Sbjct: 239 KIFHFDLERE-DGISVEVAMQWNDGFQENIFCFTNNIPQRDGGTHLAGFRAALTRTLNSF 297

Query: 299 IEAEGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKY 358
           ++ EG +KK K AT+GDDAREGLTA++SVKVPDPKFSSQTKDKLVSSEVK+AVE  MG+ 
Sbjct: 298 MDKEGFSKKAKTATSGDDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVKSAVESAMGEK 357

Query: 359 FADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPA 418
            ++FL+ENP+EAK V  K+IDAARAREAARKAREMTRRKGALD+AGLPGKLADCQEKDPA
Sbjct: 358 LSEFLVENPSEAKMVCSKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQEKDPA 417

Query: 419 LSELYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGC 478
           LSELYIVEGDSAGGSAKQGRNR+ QAILPLKGKILNVEKARFDKMLSSQEV TLITALGC
Sbjct: 418 LSELYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGC 477

Query: 479 GIGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYK 538
           GIGR+EYN DKLRYHNIIIMTDADVDGSHIRTLLLTFF+RQMPELIERGY+YIAQPPLYK
Sbjct: 478 GIGRDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYVYIAQPPLYK 537

Query: 539 VKRGKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKR 598
           VK+GKQEQYIKD++AM +Y    AL++ASLHVN  AP L+G ALEKLV +Y   I    R
Sbjct: 538 VKKGKQEQYIKDEEAMNQYQVSLALDNASLHVNAEAPALAGEALEKLVQQYNAGIKLADR 597

Query: 599 LSRLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRE 658
           +SR YP+ L    IY   ++ +   + +A++ W ++   +L A E     Y   +    E
Sbjct: 598 MSRRYPRALVHELIYTSRLTAEQCHDAAAVEAWTKQLVEQLNAKEVGASQYSYEVELHAE 657

Query: 659 RHLWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPI 718
             L LP++ +  HG++     + DF  S +Y  ++ L + L+ LLE+GAY+++GER  P+
Sbjct: 658 LGLSLPKIIVRTHGVTHEHALSVDFLNSKEYGKLADLSEVLDGLLEEGAYIKRGERTLPV 717

Query: 719 SAFKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQI 778
           S+F + L+WL+ E  +  S QRYKGLGEMNP+QLWETTMDP  RRM++VTIEDA+ ADQ+
Sbjct: 718 SSFAEALEWLVKESMRGLSRQRYKGLGEMNPDQLWETTMDPETRRMMQVTIEDAVGADQL 777

Query: 779 FNTLMGDAVEPRRDFIESNALAVSNLDV 806
           F TLMGD VEPRR FIE NAL V+NLDV
Sbjct: 778 FTTLMGDQVEPRRHFIEENALKVANLDV 805



>gb|AAC22225.1| (U32738) DNA gyrase, subunit B (gyrB) [Haemophilus influenzae Rd]
          Length = 806

 Score = 1077 bits (2786), Expect = 0.0
 Identities = 549/809 (67%), Positives = 650/809 (80%), Gaps = 6/809 (0%)

Query: 1   MSE--NNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYC 58
           MSE  N+ Y +SSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDN+IDEALAG+C
Sbjct: 1   MSETTNDNYGASSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHC 60

Query: 59  SEISITIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLH 118
           S+I +TIH D S++V+D+G GIPVDIH EEGVSAAEVIMTVLHAGGKFDDN+YKVSGGLH
Sbjct: 61  SDIIVTIHDDNSVSVQDDGGGIPVDIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLH 120

Query: 119 GVGVSVVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETF 178
           GVGVSVVNALS +L+LTIRR   V EQ YH G PQ PL  +GET+ +GT V F PS + F
Sbjct: 121 GVGVSVVNALSDKLQLTIRRQGHVHEQFYHLGEPQSPLTVIGETEATGTTVRFWPSSDIF 180

Query: 179 SNIHFSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVN 238
           +   F + ILAKR+RELSFLNSGV I L D+R G E+ F YEGG++AFVEYLN NK  ++
Sbjct: 181 AITTFDYKILAKRLRELSFLNSGVSIRLIDKRDGSEDHFHYEGGIQAFVEYLNKNKNPIH 240

Query: 239 -EVFHFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNN 297
            + F+F    E+DG+GVEVALQWND  NEN+ CFTNNIPQRDGGTHLAGFR ALTR+LN+
Sbjct: 241 PKPFYFTA--EKDGIGVEVALQWNDGVNENVYCFTNNIPQRDGGTHLAGFRGALTRSLNS 298

Query: 298 YIEAEGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGK 357
           Y+E EG+ KK K+AT+GDDAREGL AIISVKVPDPKFSSQTKDKLVSSEVK+AVE  M +
Sbjct: 299 YMENEGMLKKEKVATSGDDAREGLVAIISVKVPDPKFSSQTKDKLVSSEVKSAVESAMNE 358

Query: 358 YFADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDP 417
              ++LLENP +AK +V ++I AARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDP
Sbjct: 359 KMQEYLLENPADAKIIVNQIIMAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDP 418

Query: 418 ALSELYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALG 477
           ALSELY+VEGDSAGGSAK GR+R+TQAILPLKGKILNVEKARFDKMLSSQEVGTLITALG
Sbjct: 419 ALSELYLVEGDSAGGSAKVGRDRKTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALG 478

Query: 478 CGIGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLY 537
           CGIGR+EYN DKLRYH+IIIMTDADVDGSHIRTLLLTFF+RQMPELIERGY+YIAQPPLY
Sbjct: 479 CGIGRDEYNPDKLRYHHIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYVYIAQPPLY 538

Query: 538 KVKRGKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLK 597
           KVK+GKQE+YIKD   ME+Y    AL+ A LH++ +AP ++    EKLV EY  V   + 
Sbjct: 539 KVKKGKQERYIKDADEMEQYELTLALDGAELHISTNAPAMNALVFEKLVAEYNSVQKLIG 598

Query: 598 RLSRLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDR 657
           RL+R YP  + +  IY   +S++ +  ESA++ W + F  +LTA E     Y    + + 
Sbjct: 599 RLNRHYPAPVLQGLIYQSPISIEMMKEESAVENWGKSFVEQLTAKETEAHQYSVRTQFNA 658

Query: 658 ERHLWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRP 717
           ER ++   + +  HG+ +    N DF   N+Y  +  L  QLN LLE+GAYV +GE+ +P
Sbjct: 659 ERQVYEAVITVRKHGIDTDYFLNFDFVHGNEYAKIVSLNKQLNGLLEEGAYVIRGEKVQP 718

Query: 718 ISAFKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQ 777
           + +F+  ++WL+ E  K   +QRYKGLGEMN +QLWETTMDPN RRMLKV+I+DA+AADQ
Sbjct: 719 VRSFEQAVEWLVKESRKGLEVQRYKGLGEMNADQLWETTMDPNSRRMLKVSIKDAVAADQ 778

Query: 778 IFNTLMGDAVEPRRDFIESNALAVSNLDV 806
           +F TLMGD VEPRR+FIE NAL  +NLDV
Sbjct: 779 LFTTLMGDEVEPRREFIELNALR-ANLDV 806



>gb|AAP96417.1| (AE017155) DNA gyrase subunit B; Type II topoisomerase [Haemophilus
           ducreyi 35000HP]
          Length = 810

 Score = 1067 bits (2760), Expect = 0.0
 Identities = 543/808 (67%), Positives = 644/808 (79%), Gaps = 5/808 (0%)

Query: 2   SENNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEI 61
           ++ N+YDSSSIKVL+GLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDN+IDEALAG+C +I
Sbjct: 5   NQTNSYDSSSIKVLRGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCQDI 64

Query: 62  SITIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVG 121
            +TIH+D SI+V+D+GRGIPV IH EEGVSAAEVIMTVLHAGGKFDDN+YKVSGGLHGVG
Sbjct: 65  IVTIHSDNSISVQDDGRGIPVGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVG 124

Query: 122 VSVVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSN- 180
           VSVVNALS +L+LTIRR   V EQ Y  G P  PL  +G TD +GT V F PS   F N 
Sbjct: 125 VSVVNALSSKLQLTIRREGHVHEQFYSLGEPDAPLTIIGNTDKTGTSVRFWPSLAIFKNK 184

Query: 181 IHFSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVNEV 240
             F + IL+KR+RELSFLNSGV I L DER GKEE FKYEGG+KA+VEYLN  KT ++  
Sbjct: 185 TEFEYKILSKRLRELSFLNSGVSIKLIDEREGKEEHFKYEGGIKAYVEYLNEGKTHIHNT 244

Query: 241 FHFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIE 300
             F +  E+DG+GVEV+LQWNDS+NEN+ CFTNNIPQRDGGTHLAGFR ALTR L NY++
Sbjct: 245 -PFYLATEKDGIGVEVSLQWNDSYNENVYCFTNNIPQRDGGTHLAGFRGALTRALKNYMD 303

Query: 301 AEGLAKKF--KIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKY 358
             G+ KK    I  +GDDAREGL A+ISVKVPDPKFSSQTKDKLVSSEV+ AVE  M + 
Sbjct: 304 NSGVVKKVDANIDASGDDAREGLVAVISVKVPDPKFSSQTKDKLVSSEVRGAVESSMNEA 363

Query: 359 FADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPA 418
            A++L ENP++AK +V K+IDAARAREAARKAREMTRRKGALD+ GLPGKLADCQEKDPA
Sbjct: 364 LAEYLAENPDDAKNIVTKIIDAARAREAARKAREMTRRKGALDLGGLPGKLADCQEKDPA 423

Query: 419 LSELYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGC 478
           LSELY+VEGDSAGGSAKQGR+R+ QAILPLKGKILNVEKARFDKMLSSQEV TLITALG 
Sbjct: 424 LSELYLVEGDSAGGSAKQGRDRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGA 483

Query: 479 GIGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYK 538
           GIGR++YNI+KLRYH IIIMTDADVDG+HIRTLLLTFF+RQMPELIE GY+YIAQPPLYK
Sbjct: 484 GIGRDDYNIEKLRYHKIIIMTDADVDGAHIRTLLLTFFYRQMPELIENGYVYIAQPPLYK 543

Query: 539 VKRGKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKR 598
           VK+GKQE+YI+D+  M +Y    ALE A L+V+E AP LSG ALEKL+++Y GV    +R
Sbjct: 544 VKKGKQERYIQDNDEMLQYEIDIALEGAGLYVSEGAPALSGLALEKLISQYNGVQKLFER 603

Query: 599 LSRLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRE 658
           L R YP  +    IY   +SV+    +  +  W E+    L   E +G +Y+ S+  + E
Sbjct: 604 LVRRYPMTILNELIYSTALSVELAKQQLKITAWTEQLVNTLNTKEVNGSSYQVSVYFNSE 663

Query: 659 RHLWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPI 718
           R ++ P++ +  HG+ +    + +F  SN+Y  +  LG+QLN LL D AYV +GER++ +
Sbjct: 664 RQIYEPQIVVTTHGMDTTYRIDFNFITSNEYGLIVKLGEQLNDLLADSAYVVRGERRQAV 723

Query: 719 SAFKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQI 778
           S F + LDWL+ E  K  +IQRYKGLGEMNPEQLWETTMDP  R+ML+V I DAIAAD++
Sbjct: 724 STFAEALDWLVKESRKGLTIQRYKGLGEMNPEQLWETTMDPVARKMLQVNISDAIAADKL 783

Query: 779 FNTLMGDAVEPRRDFIESNALAVSNLDV 806
           F+TLMGD VEPRRDFIESNAL  +NLD+
Sbjct: 784 FSTLMGDEVEPRRDFIESNAL-YANLDI 810



>gb|AAO89574.1| (AE016960) DNA gyrase, B subunit [Coxiella burnetii RSA 493]
          Length = 808

 Score = 1054 bits (2726), Expect = 0.0
 Identities = 522/808 (64%), Positives = 639/808 (79%), Gaps = 4/808 (0%)

Query: 1   MSENNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSE 60
           +S    YDSS+IKVLKGLDAVRKRPGMYIGDTDDG+GLHHMVFEVVDNSIDEALAG+CS 
Sbjct: 3   VSAPQKYDSSTIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGFCSH 62

Query: 61  ISITIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGV 120
           I +TIH D S++VRDNGRGIP DIH EEG SAAEVIMTVLHAGGKFD N YKVSGGLHGV
Sbjct: 63  IWVTIHADGSVSVRDNGRGIPTDIHPEEGRSAAEVIMTVLHAGGKFDKNAYKVSGGLHGV 122

Query: 121 GVSVVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSN 180
           G+SVVNALS EL +TIR++  V+ Q Y  GVPQ PL   G++D +GTE+ FKPS   FSN
Sbjct: 123 GISVVNALSEELYMTIRQNGNVYTQTYKMGVPQAPLAVTGKSDKTGTEIRFKPSNAIFSN 182

Query: 181 IHFSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVN-E 239
             F +DILAKR+REL+FLN GV I L DER+G+ ++F+YEGG+KAFVE+LN  KT ++ +
Sbjct: 183 TEFHYDILAKRLRELAFLNLGVRIELTDERSGRGDIFEYEGGIKAFVEHLNKKKTPIHSD 242

Query: 240 VFHFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYI 299
           VFHF+ ++ +  + VEVA+QWND F E + CFTNNIPQ DGGTHLAGFR+ALTR LNNYI
Sbjct: 243 VFHFSTEKND--IVVEVAMQWNDGFQETIFCFTNNIPQNDGGTHLAGFRAALTRTLNNYI 300

Query: 300 EAEGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYF 359
           E E LAKK K+  +GDD REGLT ++SVKVPDPKFSSQTKDKLVSSEVK  VE  + K  
Sbjct: 301 EGEALAKKSKVTISGDDTREGLTVVLSVKVPDPKFSSQTKDKLVSSEVKPVVESTVAKQL 360

Query: 360 ADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPAL 419
            D+LLENP +A+ +  K+IDAARAREAARKAR+MTRRK  LD+ GLPGKLADCQEKDPAL
Sbjct: 361 HDYLLENPKQARIIAMKVIDAARAREAARKARDMTRRKNVLDLGGLPGKLADCQEKDPAL 420

Query: 420 SELYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCG 479
            EL++VEGDSAGGSAKQ R+RR QAILPLKGKILNVEKARFDKMLSS EVGTLITALGCG
Sbjct: 421 CELFLVEGDSAGGSAKQARDRRYQAILPLKGKILNVEKARFDKMLSSAEVGTLITALGCG 480

Query: 480 IGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKV 539
           IG+EEYN DKLRYH II+MTDADVDGSHIRTLLLTFF+RQMPELIERG+IYIAQPPLYKV
Sbjct: 481 IGKEEYNPDKLRYHRIILMTDADVDGSHIRTLLLTFFYRQMPELIERGHIYIAQPPLYKV 540

Query: 540 KRGKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRL 599
           K+ KQEQY+KDD A++  + Q AL+ A  H    AP + G+ALE L   YR  + ++ RL
Sbjct: 541 KKSKQEQYVKDDLALDALLLQLALDGAQFHPTPQAPAIQGSALENLAAHYRTAMRSINRL 600

Query: 600 SRLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAE-KSGLTYKASLREDRE 658
            + YP  + +  +  P ++V DL+ E  +  W ++ + +L   + ++ L Y+ ++++D E
Sbjct: 601 GKRYPLYILKRLLNFPPLTVADLSEEEKVIAWTQRLEEQLNEPKTENSLRYQTAIKKDAE 660

Query: 659 RHLWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPI 718
           R L+LP V ++ HG++    F+++FF   DYR +  L ++++ L+E GAY+ + +++R +
Sbjct: 661 RELYLPMVTIINHGIAQQHLFHQEFFGCADYRHLVDLYNKISGLIEPGAYIVRNDKRRTV 720

Query: 719 SAFKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQI 778
           + F + L+W + EG K  +IQRYKGLGEMNP+QLWETTMD   RR+L V+IEDA+ AD+I
Sbjct: 721 THFGEALEWFIEEGKKGLNIQRYKGLGEMNPDQLWETTMDRESRRLLSVSIEDAVMADEI 780

Query: 779 FNTLMGDAVEPRRDFIESNALAVSNLDV 806
           F TLMGD VEPRR FIE NALAV NLDV
Sbjct: 781 FTTLMGDQVEPRRLFIEQNALAVENLDV 808



>gb|AAM39323.1| (AE012093) DNA gyrase subunit B [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
          Length = 814

 Score =  941 bits (2433), Expect = 0.0
 Identities = 490/806 (60%), Positives = 598/806 (74%), Gaps = 6/806 (0%)

Query: 4   NNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEISI 63
           N TYDSS I VL+GL+AVRKRPGMYIGD  DGTGLHHMVFEVVDNS+DEALAG+  +I +
Sbjct: 12  NGTYDSSKITVLRGLEAVRKRPGMYIGDVHDGTGLHHMVFEVVDNSVDEALAGHADDIVV 71

Query: 64  TIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVGVS 123
            IH D S+ V DNGRG+PVDIHKEEGVSAAEVI+TVLHAGGKFDDN+YKVSGGLHGVGVS
Sbjct: 72  KIHVDGSVAVSDNGRGVPVDIHKEEGVSAAEVILTVLHAGGKFDDNSYKVSGGLHGVGVS 131

Query: 124 VVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSNIHF 183
           VVNALS  L L I R    ++Q Y  G PQ+PL+++  +   GT + FKP+ E FS++ F
Sbjct: 132 VVNALSEHLWLDIWRDGFHYQQEYALGEPQYPLKQLEASTKRGTTLRFKPAVEIFSDVEF 191

Query: 184 SWDILAKRIRELSFLNSGVGILLRDER-TGKEELFKYEGGLKAFVEYLNTNKTAVNEVFH 242
            +DILA+R+RELSFLNSGV I L DER  G+ + F YEGG+++FVE+L   KT ++    
Sbjct: 192 HYDILARRLRELSFLNSGVKIALIDERGEGRRDDFHYEGGIRSFVEHLAQLKTPLHPNV- 250

Query: 243 FNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIEAE 302
            +V  E +G+ V+VALQW D++ E + CFTNNIPQ+DGGTHLAGFR ALTR L+NYIE  
Sbjct: 251 ISVTGEHNGIVVDVALQWTDAYQETMYCFTNNIPQKDGGTHLAGFRGALTRVLSNYIEQN 310

Query: 303 GLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFADF 362
           G+AK+ KI  TGDD REG+ A++SVKVPDP FSSQTK+KLVSS+V+ AVE   G    +F
Sbjct: 311 GIAKQAKITLTGDDMREGMIAVLSVKVPDPSFSSQTKEKLVSSDVRPAVENAFGARLQEF 370

Query: 363 LLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSEL 422
           L ENPNEAKA+ GK++DAARAREAARKAR++TRRKGALDIAGLPGKLADCQEKDPALSEL
Sbjct: 371 LQENPNEAKAITGKIVDAARAREAARKARDLTRRKGALDIAGLPGKLADCQEKDPALSEL 430

Query: 423 YIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIGR 482
           +IVEGDSAGGSAKQGRNR+ QA+LPL+GKILNVE+ARFD+ML+S +VGTLITALG GIGR
Sbjct: 431 FIVEGDSAGGSAKQGRNRKNQAVLPLRGKILNVERARFDRMLASDQVGTLITALGTGIGR 490

Query: 483 EEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVKRG 542
           +EYN DKLRYH II+MTDADVDGSHIRTLLLTFF+RQMPELIERGYIYI  PPLYK+K+G
Sbjct: 491 DEYNPDKLRYHRIILMTDADVDGSHIRTLLLTFFYRQMPELIERGYIYIGLPPLYKLKQG 550

Query: 543 KQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLSRL 602
           K E Y+KDD A+  Y+  SA+E A+L      P ++G ALEKL+  + G    + R +  
Sbjct: 551 KSELYLKDDAALNAYLASSAVEGAALIPASDEPPITGEALEKLLLLFAGAKEAIARNAHR 610

Query: 603 YPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERHLW 662
           Y   L    I LP + V  L  E  +   L+  QA L        T +  LR D      
Sbjct: 611 YDPALLTALIDLPPLDVVQLQAEGDVHPTLDALQAVLNRGTLG--TARYHLRFDPATDSA 668

Query: 663 LPEVELVAHGLSSYVT--FNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISA 720
              +  V   +    T       F S + R +  +   L+ L+ +GA + +G +  PI++
Sbjct: 669 AASLVSVRKHMGEEFTQVLPMGAFESGELRPLREVALALHGLVREGAQILRGNKSHPITS 728

Query: 721 FKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFN 780
           F     WL+ E  +   +QR+KGLGEMN EQLWETT++P+ RR+L+V IEDA+AADQIF+
Sbjct: 729 FAQAQAWLLEEAKRGRQVQRFKGLGEMNAEQLWETTVNPDTRRLLQVRIEDAVAADQIFS 788

Query: 781 TLMGDAVEPRRDFIESNALAVSNLDV 806
           TLMGD VEPRRDFIE NAL VSNLD+
Sbjct: 789 TLMGDVVEPRRDFIEDNALKVSNLDI 814



>dbj|BAC24162.1| (AB063521) gyrB [Wigglesworthia brevipalpis] [Wigglesworthia
           glossinidia endosymbiont of Glossina brevipalpis]
          Length = 803

 Score =  936 bits (2420), Expect = 0.0
 Identities = 464/803 (57%), Positives = 613/803 (76%), Gaps = 3/803 (0%)

Query: 5   NTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEISIT 64
           + Y SSSIK+LKGL+AV+KRPGMYIGDTDDGTGLHHM+FEVVDNSIDEALAG+C +I +T
Sbjct: 3   HNYTSSSIKILKGLEAVKKRPGMYIGDTDDGTGLHHMIFEVVDNSIDEALAGFCKKIIVT 62

Query: 65  IHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVGVSV 124
           IH D+SI+V D+GRGIPVDIH+EEG+SAAEVIMTVLHAGGKFD+++YKVSGGLHGVG+SV
Sbjct: 63  IHEDKSISVEDDGRGIPVDIHEEEGISAAEVIMTVLHAGGKFDNDSYKVSGGLHGVGISV 122

Query: 125 VNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFS-NIHF 183
           VNALS +L LTI R+ K + Q Y+ G P FPL+++G++  +GT++ F P+   F  NI F
Sbjct: 123 VNALSEKLELTIYRNGKEYNQNYNFGSPCFPLKKIGKSRKTGTKIRFWPNLSIFKKNIEF 182

Query: 184 SWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVNEVFHF 243
            ++IL KR+ ELSFLNS + I L D +  K + F YEGG+K FV+YL+ NK  ++    +
Sbjct: 183 QYEILFKRLMELSFLNSNISIYLIDIKNNKNKHFHYEGGIKEFVKYLHKNKNPIHSNMFY 242

Query: 244 NVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIEAEG 303
            + +E+D + VE+ALQWND F EN+ CFTNNI Q+DGG+HL GFRSA+TR +N+Y++ EG
Sbjct: 243 FI-KEKDKILVEIALQWNDGFKENINCFTNNISQKDGGSHLIGFRSAITRTINSYMDKEG 301

Query: 304 LAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFADFL 363
             KK K+ TTGDD REGL AIISVKVPDPKFSSQTKDKLVSSEVKTAVE  + + F  FL
Sbjct: 302 YNKKSKVITTGDDTREGLVAIISVKVPDPKFSSQTKDKLVSSEVKTAVESLLNEQFFIFL 361

Query: 364 LENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSELY 423
           LENP ++K +V K++DAAR REAA++ REMTR+KGALD+ G+PGKLA CQE +P+L ELY
Sbjct: 362 LENPKDSKFIVNKILDAARVREAAKRIREMTRKKGALDVIGIPGKLASCQENNPSLCELY 421

Query: 424 IVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIGRE 483
           +VEGDSAGGSAKQGRNR+ QAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIGR+
Sbjct: 422 LVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIGRD 481

Query: 484 EYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVKRGK 543
           EYN DKLRYH IIIMTDAD+DGSHIRTLLLTFF+RQMPE+I+RGY++IAQPPLYK+K GK
Sbjct: 482 EYNPDKLRYHCIIIMTDADIDGSHIRTLLLTFFYRQMPEVIDRGYLFIAQPPLYKIKIGK 541

Query: 544 QEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLSRLY 603
            ++YIK+D AME +  + ++E+ASL +N  +  +SG +L+ ++ ++  +   +   +   
Sbjct: 542 NKKYIKNDNAMENFQIKRSVENASLKLNSKSSIISGKSLKNIIYDFLNIKKIISE-TEFS 600

Query: 604 PQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERHLWL 663
           P+EL  + +    +  +   N+  ++ WL   +  +     +   Y   + +      + 
Sbjct: 601 PKELLMYSLNQSELKKEHFLNKEKLKIWLLNLEKNIDELNSNKFKYSFEIIDKDCSGFYK 660

Query: 664 PEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISAFKD 723
             ++   +G+      N++F    +Y+++  L ++++ + +  AYV+KG  +  I   ++
Sbjct: 661 FLLKKELYGIKKKYCINKNFINLIEYKTIVCLINKIDYISKKHAYVKKGNNRHNIKNIEE 720

Query: 724 GLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFNTLM 783
             +WL+ E  +  +IQRYKGLGEMNPEQLWETTM+P  R M++VTI+DAI ADQ+F+TLM
Sbjct: 721 ACNWLLKESRQGMTIQRYKGLGEMNPEQLWETTMNPVSRSMMQVTIKDAIVADQLFSTLM 780

Query: 784 GDAVEPRRDFIESNALAVSNLDV 806
           GD+VEPR+ FI+ NAL VSN+D+
Sbjct: 781 GDSVEPRKSFIKKNALNVSNIDI 803



>gb|AAC34893.1| (AF085684) DNA gyrase B subunit [Methylovorus sp. SS1]
          Length = 799

 Score =  934 bits (2413), Expect = 0.0
 Identities = 482/805 (59%), Positives = 598/805 (74%), Gaps = 14/805 (1%)

Query: 7   YDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEISITIH 66
           YDSSSIK+L+GLDAVRKRPGMYIGDT DG+GLHHMVFEV+DN+IDEALAG+C +I + IH
Sbjct: 4   YDSSSIKILEGLDAVRKRPGMYIGDTSDGSGLHHMVFEVLDNAIDEALAGHCDDIKVIIH 63

Query: 67  TDESITVRDNGRGIPVDIHKEE----GVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVGV 122
            D S+++ DNGRGIP DI +++      SAAE++MT LHAGGKFD N+YKVSGGLHGVGV
Sbjct: 64  PDNSVSISDNGRGIPTDIKQDDIKAVKRSAAEIVMTELHAGGKFDQNSYKVSGGLHGVGV 123

Query: 123 SVVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSNIH 182
           SVVNALS  LRL I R+ +V +  +  G    P+   G T+  GTEVHF  S ETF  + 
Sbjct: 124 SVVNALSDWLRLKIYRNGQVHQMEFRRGEAVRPVAVTGTTERKGTEVHFLASTETFGVVE 183

Query: 183 FSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVNEVFH 242
           F ++ILAKRIRELSFLN+GV I L D+R GK E F + GG++ FVEY+N +KT ++    
Sbjct: 184 FHFEILAKRIRELSFLNNGVKIELIDQRNGKSENFAHSGGVRGFVEYMNRSKTVLHPKPF 243

Query: 243 FNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIEAE 302
           + V  E+DG+ +EV++QWNDS+ E + CFTNNIPQRDGGTHL G R+A+TR LNNYIE  
Sbjct: 244 YAVG-EKDGMTIEVSMQWNDSYAETVQCFTNNIPQRDGGTHLTGLRTAMTRTLNNYIEQN 302

Query: 303 GLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFADF 362
            LAKK KI TTGDD REGLT ++SVKVP+PKFSSQTKDKLVSSEV+  V++ +    A+F
Sbjct: 303 ELAKKAKIETTGDDMREGLTCVLSVKVPEPKFSSQTKDKLVSSEVQPVVQEVVAAKLAEF 362

Query: 363 LLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSEL 422
           LLENP +AK +  K+IDAARAR+AARKAREMTRRKGA+D  GLPGKLADCQE+DP   EL
Sbjct: 363 LLENPVDAKVICNKIIDAARARDAARKAREMTRRKGAMDTMGLPGKLADCQERDPTKCEL 422

Query: 423 YIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIGR 482
           Y+VEGDSAGGSAKQGR+R+ QAILPLKGKILNVEKARFDK+LSSQE+ TLITA+G GIG+
Sbjct: 423 YLVEGDSAGGSAKQGRDRKFQAILPLKGKILNVEKARFDKLLSSQEIATLITAMGTGIGK 482

Query: 483 EEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVKRG 542
           ++++ D +RYH IIIMTDADVDG+HIRTLLLTFF+RQM EL+ERG+IYIAQPPLYKVK+G
Sbjct: 483 DDFSADNVRYHRIIIMTDADVDGAHIRTLLLTFFYRQMTELVERGHIYIAQPPLYKVKQG 542

Query: 543 KQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLSRL 602
           K E+Y+KD Q +++Y+ QS+L+ A L   E    L+G  L ++  +     A ++RL  L
Sbjct: 543 KDERYLKDQQELDQYLLQSSLKGAELLTREGGETLAGEQLAEIAKQMVLTEAVIRRLRSL 602

Query: 603 YPQELTEHFIYLP-TVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERHL 661
           Y + +      +  TV +D  A  +A+   L       T +E         + +D E   
Sbjct: 603 YDESVLRALQNVEGTVELDTEAKANAVAEQLRPLLGH-TGSE-------VIVAQDLEAGT 654

Query: 662 WLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISAF 721
           +  EV    HG       + DF AS DYR +S +   L  LL +GA +++GE+ +P+S F
Sbjct: 655 YRLEVNKYVHGNLQSCVIDTDFLASGDYRQISKMSVMLQGLLGEGASIKRGEKSQPVSNF 714

Query: 722 KDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFNT 781
           K  LDWL+ E     +IQRYKGLGEMNPEQLWETTMDP VRR+LKV I+DAIAAD+IF T
Sbjct: 715 KAALDWLLDEAKHNLNIQRYKGLGEMNPEQLWETTMDPTVRRLLKVQIDDAIAADEIFTT 774

Query: 782 LMGDAVEPRRDFIESNALAVSNLDV 806
           LMGD VEPRR FIE NAL V+NLDV
Sbjct: 775 LMGDQVEPRRAFIEGNALGVNNLDV 799



>emb|CAD16937.1| (AL646075) PROBABLE DNA GYRASE (SUBUNIT B) PROTEIN [Ralstonia
           solanacearum]
          Length = 842

 Score =  932 bits (2410), Expect = 0.0
 Identities = 491/836 (58%), Positives = 608/836 (72%), Gaps = 36/836 (4%)

Query: 2   SENNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEI 61
           +E+++Y ++SI++L+GL+AVRKRPGMYIGDT DGTGLHH+VFEV+DNSIDEALAG+C+EI
Sbjct: 12  AESSSYGAASIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEALAGHCTEI 71

Query: 62  SITIHTDESITVRDNGRGIPVDIH----KEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGL 117
            +TIHTD SI+V DNGRGIP  I      E   SAAE++MT LHAGGKFD N+YKVSGGL
Sbjct: 72  HVTIHTDNSISVIDNGRGIPTGIKFDDKHEPKRSAAEIVMTELHAGGKFDQNSYKVSGGL 131

Query: 118 HGVGVSVVNALSHELRLTIRRHNKVWEQVYHHGVPQ-----------------FPLREVG 160
           HGVGVS VN LS  L+LT+RR  +V    +  G+PQ                  PLR  G
Sbjct: 132 HGVGVSCVNGLSKWLKLTVRRDGRVHHMEFARGIPQNRLLEPAEAPDGKTVEVSPLRVSG 191

Query: 161 ETDGSGTEVHFKPSPETFSNIHFSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYE 220
            TD  GTEVHF    E F+N+ + ++IL+KRIRELSFLN+GV I L D+RTGKEE F + 
Sbjct: 192 TTDKRGTEVHFLADEEIFTNVEYHYEILSKRIRELSFLNNGVHIKLTDQRTGKEEDFAFS 251

Query: 221 GGLKAFVEYLNTNKTAVNEVFHFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDG 280
           GG+K FVEY+N NKT ++    FN   E+DGVGVEV++QWND FNE +LCFTNNIPQRDG
Sbjct: 252 GGVKGFVEYINKNKTVLHPTV-FNATGEKDGVGVEVSMQWNDGFNEQVLCFTNNIPQRDG 310

Query: 281 GTHLAGFRSALTRNLNNYIEAEGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKD 340
           GTHL G R+A+TR +N YI    +AKK K+ T+GDD REGLT ++SVKVP+PKFSSQTKD
Sbjct: 311 GTHLTGLRAAMTRVINKYIADNEIAKKAKVETSGDDMREGLTCVLSVKVPEPKFSSQTKD 370

Query: 341 KLVSSEVKTAVEQEMGKYFADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGAL 400
           KLVSSEV+  VE+ + K  ADFLLE PN+AK + GK+++AARAREAARKAREMTRRKG L
Sbjct: 371 KLVSSEVRLPVEEVVAKALADFLLETPNDAKIICGKIVEAARAREAARKAREMTRRKGVL 430

Query: 401 DIAGLPGKLADCQEKDPALSELYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARF 460
           D  GLPGKLADCQEKDPALSEL+IVEGDSAGGSAKQGR+R+ QAILPLKGKILNVE+ARF
Sbjct: 431 DGMGLPGKLADCQEKDPALSELFIVEGDSAGGSAKQGRDRKFQAILPLKGKILNVERARF 490

Query: 461 DKMLSSQEVGTLITALGCGIGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQM 520
           DKMLSSQEV TLITA+G GIG+++YN+DKLRYH IIIMTDADVDGSHIRTLLLTFF+RQM
Sbjct: 491 DKMLSSQEVLTLITAMGTGIGKDDYNLDKLRYHRIIIMTDADVDGSHIRTLLLTFFYRQM 550

Query: 521 PELIERGYIYIAQPPLYKVKRGKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGA 580
           PE+IERG++YIAQPPLYK+K GK+E+YIKDD  M  Y+ + AL+ A L V      ++  
Sbjct: 551 PEIIERGHVYIAQPPLYKIKHGKEERYIKDDVEMAAYLMRQALDTAIL-VRADGTEIASD 609

Query: 581 ALEKLVNEYRGVIATLKRLSRLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARL- 639
           AL +L  +Y+   A ++RLSR+   +          +   DL++E+  +   +  +ARL 
Sbjct: 610 ALAELARQYQFSRAVIERLSRVIDADALRAIAEGVAL---DLSSEAGAEASAKALKARLL 666

Query: 640 -----TAAEKSGLTYKASLREDRERHLWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSL 694
                 ++   G T  A ++ D +   +   V    HG       + DF A  DY ++S 
Sbjct: 667 EMQGNASSANGGATADAFMQYDEKHEKYRVMVVRRQHGNQRLSHIDADFVAGADYATLSQ 726

Query: 695 LGDQLNSLLEDGAYVQKG----ERKRPISAFKDGLDWLMAEGTKRHSIQRYKGLGEMNPE 750
                  L+ +GA V++G    +R++ ++ F   + WL+ E  +  S QRYKGLGEMNP 
Sbjct: 727 TAQTFQGLIGEGAKVRRGTGDKQREQGVTDFHAAITWLLGEAERGISRQRYKGLGEMNPS 786

Query: 751 QLWETTMDPNVRRMLKVTIEDAIAADQIFNTLMGDAVEPRRDFIESNALAVSNLDV 806
           QLWETTMD   RR+LKV IEDAIAADQIF TLMGD VEPRR+FIESNAL   N+DV
Sbjct: 787 QLWETTMDVTQRRLLKVQIEDAIAADQIFTTLMGDDVEPRRNFIESNALVARNIDV 842



>emb|CAD83914.1| (BX321856) DNA gyrase, subunit B:DNA topoisomerase II gyrB
           [Nitrosomonas europaea ATCC 19718]
          Length = 809

 Score =  932 bits (2409), Expect = 0.0
 Identities = 474/809 (58%), Positives = 606/809 (74%), Gaps = 17/809 (2%)

Query: 2   SENNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEI 61
           + +  Y+S SIK+LKGLDAVRKRPGMYIGDT DGTGLHHMVFEVVDN+IDEALAGYC +I
Sbjct: 14  NSHRDYNSDSIKILKGLDAVRKRPGMYIGDTSDGTGLHHMVFEVVDNAIDEALAGYCDDI 73

Query: 62  SITIHTDESITVRDNGRGIPVDIHKEEGV--SAAEVIMTVLHAGGKFDDNTYKVSGGLHG 119
           S+ IH D S+++ DNGRGIP DI +++ +  SAAE++MT LHAGGKFDDN+YKVSGGLHG
Sbjct: 74  SVIIHADNSVSIHDNGRGIPTDIKQDDELKRSAAEIVMTELHAGGKFDDNSYKVSGGLHG 133

Query: 120 VGVSVVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFS 179
           VGVSVVNALS  LRLTIRR+  V++  +  GV   PL+  G+T+  GTEVHF  S   F 
Sbjct: 134 VGVSVVNALSEWLRLTIRRNGNVYQMEFREGVAVAPLKVTGQTEKHGTEVHFLASQSVFG 193

Query: 180 NIHFSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVNE 239
           +I + +DI AKR+RELSFLN G+ I L D+R  +EE+F + GG++ FVEY+N +KT ++ 
Sbjct: 194 DITYHYDIFAKRLRELSFLNHGIKIRLADQRDDREEVFAFTGGIRNFVEYINRSKTVLHP 253

Query: 240 VFHFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYI 299
              F  +  +D + VE+A+QWNDS+ E +LCFTNNIPQ+DGGTHL G R+A+TR LNNYI
Sbjct: 254 SI-FYAKGLKDNITVEIAMQWNDSYAEQVLCFTNNIPQKDGGTHLTGLRAAMTRTLNNYI 312

Query: 300 EAEGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYF 359
           E   LAKK K+ TTGDD REG+T ++SVK+ +PKFSSQTK+KLVSSEV+ AVE+ + +  
Sbjct: 313 EKNELAKKAKVDTTGDDMREGITCVLSVKLFEPKFSSQTKEKLVSSEVRPAVEEIVVQKL 372

Query: 360 ADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPAL 419
           +DFLLENPNEAK +  K+I+AARAREAARKARE+TRRKG LD  GLPGKLADCQEKDP L
Sbjct: 373 SDFLLENPNEAKTICNKIIEAARAREAARKARELTRRKGVLDSMGLPGKLADCQEKDPKL 432

Query: 420 SELYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCG 479
            ELY+VEGDSAGGSAKQGR+R+ QAI+PLKGKILNVEK+RFDK++SSQE+ +LITALG G
Sbjct: 433 CELYLVEGDSAGGSAKQGRDRKFQAIMPLKGKILNVEKSRFDKLISSQEIVSLITALGTG 492

Query: 480 IGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKV 539
           IG++EYN DKLRYH IIIMTDADVDGSHIRTLLLTFF+RQMPELIERG+IYIAQPPLYK+
Sbjct: 493 IGKDEYNPDKLRYHRIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGHIYIAQPPLYKI 552

Query: 540 KRGKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRL 599
           K GKQE+Y+KDD  ++ Y+   AL  A LH   + P ++G AL ++ +EY      ++R+
Sbjct: 553 KHGKQERYLKDDYELKHYILGLALVGAELHTGANNPPITGEALARIADEYLLAETVIERM 612

Query: 600 SRLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRER 659
           SRL  + +    +  P +   DL++E++         AR +AA  + L     +  + + 
Sbjct: 613 SRLIDRTVMYALLKQPDI---DLSSETS---------ARDSAARLAILLDDVEILAEYDE 660

Query: 660 HLWLPEVELV--AHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRP 717
           +     ++++   HG       + DF  S D+  +      L+ L+ +GA V++GE++  
Sbjct: 661 NFERYRLKIIRKQHGNLRTSYLDDDFLQSGDFARIRQAAQILHGLIGEGAKVKRGEQEIS 720

Query: 718 ISAFKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQ 777
           +  FK+ L+WL+ E  K  +IQRYKGLGEMNPEQLWETTMDP  RR+L+  IED+I  D+
Sbjct: 721 VREFKEALEWLLEETKKGITIQRYKGLGEMNPEQLWETTMDPGNRRLLRAQIEDSILTDE 780

Query: 778 IFNTLMGDAVEPRRDFIESNALAVSNLDV 806
           IF TLMGD VEPRR FIESNAL   N+D+
Sbjct: 781 IFTTLMGDVVEPRRAFIESNALRARNIDI 809



>gb|AAM34896.1| (AE011623) DNA gyrase subunit B [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 814

 Score =  931 bits (2406), Expect = 0.0
 Identities = 485/806 (60%), Positives = 596/806 (73%), Gaps = 6/806 (0%)

Query: 4   NNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEISI 63
           N TYDSS I VL+GL+AVRKRPGMYIGD  DGTGLHHMVFEVVDNS+DEALAG+  +I +
Sbjct: 12  NGTYDSSKITVLRGLEAVRKRPGMYIGDVHDGTGLHHMVFEVVDNSVDEALAGHADDIVV 71

Query: 64  TIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVGVS 123
            I  D S+ V DNGRG+PVDIHKEEGVSAAEVI+TVLHAGGKFDDN+YKVSGGLHGVGVS
Sbjct: 72  KILADGSVAVSDNGRGVPVDIHKEEGVSAAEVILTVLHAGGKFDDNSYKVSGGLHGVGVS 131

Query: 124 VVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSNIHF 183
           VVNALS  L L I R    ++Q Y  G PQ+PL+++  +   GT + FKPS   FS++ F
Sbjct: 132 VVNALSEHLWLDIWRDGFHYQQEYALGEPQYPLKQLEASTKRGTTLRFKPSVAIFSDVEF 191

Query: 184 SWDILAKRIRELSFLNSGVGILLRDER-TGKEELFKYEGGLKAFVEYLNTNKTAVNEVFH 242
            +DILA+R+RELSFLNSGV I L DER  G+ + F YEGG+++FVE+L   K+ ++    
Sbjct: 192 HYDILARRLRELSFLNSGVKITLIDERGEGRRDDFHYEGGIRSFVEHLAQLKSPLHPNV- 250

Query: 243 FNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIEAE 302
            +V  E +G+ V+VALQW D++ E + CFTNNIPQ+DGGTHLAGFR+ALTR L+ YIE  
Sbjct: 251 ISVTGEHNGIMVDVALQWTDAYQETMYCFTNNIPQKDGGTHLAGFRAALTRVLSTYIEQN 310

Query: 303 GLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFADF 362
           G+AK+ K+A TGDD REG+ A++SVKVPDP FSSQTK+KLVSS+V+ AVE   G    +F
Sbjct: 311 GIAKQAKVALTGDDMREGMIAVLSVKVPDPSFSSQTKEKLVSSDVRPAVENAFGARLQEF 370

Query: 363 LLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSEL 422
           L ENPNEAKA+ GK++DAARAREAARKAR++TRRKGALDIAGLPGKLADCQEKDPALSEL
Sbjct: 371 LQENPNEAKAITGKIVDAARAREAARKARDLTRRKGALDIAGLPGKLADCQEKDPALSEL 430

Query: 423 YIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIGR 482
           +IVEGDSAGGSAKQGRNR+ QA+LPL+GKILNVE+ARFD+ML+S +VGTLITALG GIGR
Sbjct: 431 FIVEGDSAGGSAKQGRNRKNQAVLPLRGKILNVERARFDRMLASDQVGTLITALGTGIGR 490

Query: 483 EEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVKRG 542
           +EYN DKLRYH II+MTDADVDGSHIRTLLLTFF+RQMPELIERGYIYI  PPLYK+K+G
Sbjct: 491 DEYNPDKLRYHRIILMTDADVDGSHIRTLLLTFFYRQMPELIERGYIYIGLPPLYKLKQG 550

Query: 543 KQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLSRL 602
           K E Y+KDD A+  Y+  +A+E A+L      P ++G ALEKL+  +      + R +  
Sbjct: 551 KSELYLKDDAALNAYLASNAVEGAALIPATDEPPITGEALEKLLMLFTSANEAIARNAHR 610

Query: 603 YPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERHLW 662
           Y   L    I LP + V+ L  E      L+  QA L         Y+  LR D      
Sbjct: 611 YDPALLTALIDLPPLDVEKLQAEGDQHPTLDALQAVLNRGTLGTARYQ--LRFDPGSDNA 668

Query: 663 LPEVELVAHGLSSYVT--FNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISA 720
              +  +   +    T       F S + R +  +   L+ L+ +GA + +G +  PI++
Sbjct: 669 PATLVAIRRHMGEEFTQVLPMGAFESGELRPLREVSLALHDLVREGAQIVRGNKSHPITS 728

Query: 721 FKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFN 780
           F     WL+ E  K   +QR+KGLGEMN EQLWETT++P+ RR+L+V IEDA+AADQIF+
Sbjct: 729 FAQAHAWLLDEAKKGRQVQRFKGLGEMNAEQLWETTVNPDTRRLLQVRIEDAVAADQIFS 788

Query: 781 TLMGDAVEPRRDFIESNALAVSNLDV 806
           TLMGD VEPRRDFIE NAL VSNLD+
Sbjct: 789 TLMGDVVEPRRDFIEDNALKVSNLDI 814



>emb|CAD83545.1| (BX248584) DNA gyrase subunit B [Candidatus Blochmannia floridanus]
          Length = 806

 Score =  924 bits (2389), Expect = 0.0
 Identities = 462/805 (57%), Positives = 609/805 (75%), Gaps = 6/805 (0%)

Query: 5   NTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEISIT 64
           ++YDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDN+IDE ++GYC++I +T
Sbjct: 3   SSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEVISGYCNKILVT 62

Query: 65  IHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVGVSV 124
           IH D S++V+D+GRGIP  +H+E G+SAAEVIMTVLHAGGKFD+  YKVSGGLHGVGVSV
Sbjct: 63  IHQDNSVSVKDDGRGIPTGLHEESGISAAEVIMTVLHAGGKFDNTNYKVSGGLHGVGVSV 122

Query: 125 VNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSN-IHF 183
           VNALS +L L I R  K+++QV++ G P+ PL  VGE+  SGT + F P+   F+N   F
Sbjct: 123 VNALSEKLELIIERDFKIYKQVFYLGKPKSPLSVVGESKKSGTMIRFWPNLHIFTNKTEF 182

Query: 184 SWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVNE-VFH 242
            ++ILA+R +EL+FLNSGV I+LRD R  KE++F   GG+KAF++YLN  KT ++  +F+
Sbjct: 183 QYEILARRFKELAFLNSGVSIILRDFRNNKEDIFYCNGGIKAFIKYLNVKKTPIHSNIFY 242

Query: 243 FNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIEAE 302
           ++  + E  +G++VALQWNDSF E +  FTNNIPQRDGGTHL+G +SA+TR ++ YI+ E
Sbjct: 243 YSGYKGE--IGIKVALQWNDSFQERIYSFTNNIPQRDGGTHLSGLKSAITRTIHFYIDKE 300

Query: 303 GLA-KKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFAD 361
           G   KK KI T GDD REGL A++S+ +P+PKFSSQTKDKL+SSEVKTAVE  + +   +
Sbjct: 301 GYNNKKDKIVTMGDDVREGLVAVLSIYIPNPKFSSQTKDKLISSEVKTAVESLIYEKLIE 360

Query: 362 FLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSE 421
           F LENP+++K+++ K+I AARARE+ARK R+++RRKG  D + LPGKLADCQEK+P  SE
Sbjct: 361 FFLENPSDSKSIINKVISAARARESARKIRDLSRRKGVSDFSVLPGKLADCQEKNPVYSE 420

Query: 422 LYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIG 481
           LY+VEGDSAGGSAKQGRNR+ QAILPLKGKILNVEKARFDKMLSS EV +LITALGCGIG
Sbjct: 421 LYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSPEVMSLITALGCGIG 480

Query: 482 REEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVKR 541
           + EYN++KLRYH+II+MTDADVDG+HIRTLLLTFF+R MPE+I++G+I+IAQPPLYKV++
Sbjct: 481 QNEYNLNKLRYHSIILMTDADVDGAHIRTLLLTFFYRYMPEIIDKGHIFIAQPPLYKVQK 540

Query: 542 GKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLSR 601
           G Q QYIKD++ M +Y    A+  A L+V+ +AP +S   LE+L+ E   +   + R+ R
Sbjct: 541 GNQSQYIKDEEEMYQYQISMAVRYACLYVDPYAPPISEEVLEQLIFERYLIQKIIIRMER 600

Query: 602 LYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERHL 661
            +P+EL    I+   +S    +N   ++ W++     L  +EK G  Y   +R + + + 
Sbjct: 601 QFPKELLNQLIFHSVLSEKQWSNYVDVEIWMKSLIELLKRSEKYGSHYSFIIRNNNKENF 660

Query: 662 WLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNS-LLEDGAYVQKGERKRPISA 720
           + P + +  +G+ +      DF  S +YR +   G ++N  LL + +Y+Q    ++ I++
Sbjct: 661 FEPILRIRTYGIDTDYPLGIDFIKSYEYRKLVTFGKKMNELLLSNHSYIQYKNDRKKINS 720

Query: 721 FKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFN 780
           F   ++WLM E  K   IQRYKGLGEMNP+QLWETTM+P  R MLKVT+ DA+ AD +F+
Sbjct: 721 FDQAIEWLMQESRKGLIIQRYKGLGEMNPDQLWETTMNPKNRCMLKVTVRDALEADNLFS 780

Query: 781 TLMGDAVEPRRDFIESNALAVSNLD 805
           TLMGD VEPRR FIE NAL   N+D
Sbjct: 781 TLMGDVVEPRRIFIEDNALKAKNVD 805



>gb|AAF82818.1|AE003855_5 (AE003855) DNA gyrase subunit B [Xylella fastidiosa 9a5c]
          Length = 814

 Score =  916 bits (2368), Expect = 0.0
 Identities = 477/807 (59%), Positives = 588/807 (72%), Gaps = 3/807 (0%)

Query: 1   MSENNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSE 60
           +S    YDSS I VL+GLDAVRKRPGMYIGD  DGTGLHHMVFEVVDNS+DEALAG+   
Sbjct: 10  LSNGGIYDSSKITVLRGLDAVRKRPGMYIGDVHDGTGLHHMVFEVVDNSVDEALAGHADS 69

Query: 61  ISITIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGV 120
           I + IH D S++V DNGRGIPVDIHKEEGVSAAEVI+TVLHAGGKFDDN+YKVSGGLHGV
Sbjct: 70  ILVKIHVDGSVSVSDNGRGIPVDIHKEEGVSAAEVILTVLHAGGKFDDNSYKVSGGLHGV 129

Query: 121 GVSVVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSN 180
           GVSVVNALS  L L I R    ++Q Y  G PQ+PL+++G +   GT + FKP+ E FS+
Sbjct: 130 GVSVVNALSERLWLDIWRDGYHYQQEYVLGEPQYPLKQLGVSAKRGTTLRFKPAKEIFSD 189

Query: 181 IHFSWDILAKRIRELSFLNSGVGILLRDER-TGKEELFKYEGGLKAFVEYLNTNKTAVNE 239
           + F ++ LAKR+RELSFLNSG+ + L DER  G+ + F YEGG+++FVE+L   KT ++ 
Sbjct: 190 VEFHYENLAKRLRELSFLNSGLQVSLIDERGEGRRDDFHYEGGIRSFVEHLAQLKTPLHS 249

Query: 240 VFHFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYI 299
               +V  E +G+ V+VALQW D++ E + CFTNNIPQ+DGGTHLAGFR+ALTR L NYI
Sbjct: 250 NV-ISVTGEHNGIVVDVALQWTDAYQETMYCFTNNIPQKDGGTHLAGFRAALTRTLGNYI 308

Query: 300 EAEGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYF 359
           E  G+A++ KI  +GDD REG+ A++SVKVP+P FSSQTK+KLVSS+VK AVE   G   
Sbjct: 309 EQNGIARQAKITFSGDDMREGMIAVLSVKVPEPSFSSQTKEKLVSSDVKPAVEATFGLRL 368

Query: 360 ADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPAL 419
            +FL ENPNEA+A+ GK++DAARAREAARKAR++TRRKG LDIAGLPGKLADCQEKDPA+
Sbjct: 369 EEFLQENPNEARAIAGKIVDAARAREAARKARDLTRRKGVLDIAGLPGKLADCQEKDPAM 428

Query: 420 SELYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCG 479
           SEL+IVEGDSAGGSAKQGRNR+ QA+LPL+GKILNVE+ARFD+MLSS EVGTLITALG G
Sbjct: 429 SELFIVEGDSAGGSAKQGRNRKNQAVLPLRGKILNVERARFDRMLSSAEVGTLITALGTG 488

Query: 480 IGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKV 539
           IG++EYN DKLRYH IIIMTDADVDGSHIRTLLLTFF+RQMPELIERG+IYI  PPLYK+
Sbjct: 489 IGKDEYNPDKLRYHRIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGHIYIGLPPLYKL 548

Query: 540 KRGKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRL 599
           K+GK E Y+KDD A+  Y+  SA+E A L   E  P + G ALEKL+  Y     T+ R 
Sbjct: 549 KQGKSELYLKDDIALNVYLANSAVEGAQLLPAEGEPPIEGLALEKLLITYIAAKDTIARH 608

Query: 600 SRLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRER 659
           S  Y   L E  +    +      + S  +  L+   A L  +      Y   ++   E+
Sbjct: 609 SHRYDSRLLEALLEFTPLDSTCFQSYSDSE-HLQSLMALLNQSSLGAPRYILKMQFPDEQ 667

Query: 660 HLWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPIS 719
           H           G             + + R +      L+ L+ +GA + +G + + I 
Sbjct: 668 HPAALLATRYHMGEELTQVLQLSALETGELRPLYEAAKLLHGLIRNGAKIVRGTKSQSIE 727

Query: 720 AFKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIF 779
            F D   WL+ +  K   IQR+KGLGEMNPEQLW+TT++P+ RR+L+V IED IAADQIF
Sbjct: 728 CFGDAQAWLLEDAKKGRQIQRFKGLGEMNPEQLWDTTVNPDTRRLLQVCIEDGIAADQIF 787

Query: 780 NTLMGDAVEPRRDFIESNALAVSNLDV 806
           +TLMGD VEPRR FIE+NAL V+ LD+
Sbjct: 788 STLMGDVVEPRRGFIENNALKVTRLDI 814



>gb|AAO27913.1| (AE012553) DNA gyrase subunit B [Xylella fastidiosa Temecula1]
          Length = 814

 Score =  911 bits (2355), Expect = 0.0
 Identities = 475/807 (58%), Positives = 586/807 (72%), Gaps = 3/807 (0%)

Query: 1   MSENNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSE 60
           +S    YDSS I VL+GLDAVRKRPGMYIGD  DGTGLHHMVFEVVDNS+DEALAG+   
Sbjct: 10  LSNGGIYDSSKITVLRGLDAVRKRPGMYIGDVHDGTGLHHMVFEVVDNSVDEALAGHADS 69

Query: 61  ISITIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGV 120
           I + IH D S++V DNGRGIPVDIHKEEGVSAAEVI+TVLHAGGKFDDN+YKVSGGLHGV
Sbjct: 70  ILVKIHIDGSVSVSDNGRGIPVDIHKEEGVSAAEVILTVLHAGGKFDDNSYKVSGGLHGV 129

Query: 121 GVSVVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSN 180
           GVSVVNALS  L L I R    ++Q Y  G PQ+PL+++  +   GT + FKP+ E FS+
Sbjct: 130 GVSVVNALSERLWLDIWRDGYHYQQEYVLGEPQYPLKQLEVSAKRGTTLRFKPAKEIFSD 189

Query: 181 IHFSWDILAKRIRELSFLNSGVGILLRDER-TGKEELFKYEGGLKAFVEYLNTNKTAVNE 239
           + F ++ LAKR+RELSFLNSG+ + L DER  G+ + F YEGG+++FVE+L   KT ++ 
Sbjct: 190 VEFHYENLAKRLRELSFLNSGLKVSLIDERGEGRRDDFHYEGGIRSFVEHLAQLKTPLHP 249

Query: 240 VFHFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYI 299
               +V  E +G+ V+ ALQW D++ E + CFTNNIPQ+DGGTHLAGFR+ALTR L NYI
Sbjct: 250 NV-ISVTGEHNGIVVDAALQWTDAYQETMYCFTNNIPQKDGGTHLAGFRAALTRTLGNYI 308

Query: 300 EAEGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYF 359
           E  G+A++ KI  +GDD REG+ A++SVKVP+P FSSQTK+KLVSS+VK AVE   G   
Sbjct: 309 EQNGVARQAKITFSGDDMREGMIAVLSVKVPEPSFSSQTKEKLVSSDVKPAVEATFGLRL 368

Query: 360 ADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPAL 419
            +FL ENPNEA+A+ GK++DAARAREAARKAR++TRRKG LDIAGLPGKLADCQEKDPA+
Sbjct: 369 EEFLQENPNEARAIAGKIVDAARAREAARKARDLTRRKGVLDIAGLPGKLADCQEKDPAM 428

Query: 420 SELYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCG 479
           SEL+IVEGDSAGGSAKQGRNR+ QA+LPL+GKILNVE+ARFD+MLSS EVGTLITALG G
Sbjct: 429 SELFIVEGDSAGGSAKQGRNRKNQAVLPLRGKILNVERARFDRMLSSAEVGTLITALGTG 488

Query: 480 IGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKV 539
           IG++EYN DKLRYH +IIMTDADVDGSHIRTLLLTFF+RQMPELIERG+IYI  PPLYK+
Sbjct: 489 IGKDEYNPDKLRYHRVIIMTDADVDGSHIRTLLLTFFYRQMPELIERGHIYIGLPPLYKL 548

Query: 540 KRGKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRL 599
           K+GK E Y+KDD A+  Y+  SA+E A L   E  P + G ALEKL+  Y     T+ R 
Sbjct: 549 KQGKSELYLKDDIALNVYLANSAVEGAQLLPAEGEPPIEGLALEKLLITYIAAKDTIVRH 608

Query: 600 SRLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRER 659
           S  Y   L E  +    +      + S  +  L+   A L  +      Y   ++   E+
Sbjct: 609 SHRYDSRLLEALLEFTPLDSTCFQSYSDSE-HLQSLMALLNQSSLGAPRYILKMQFPDEQ 667

Query: 660 HLWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPIS 719
           H           G             + + R +      L+ L+ +GA + +G + + I 
Sbjct: 668 HSAALLATRYHMGEELTQVLQLSALETGELRPLYEAAKLLHGLIRNGAKIVRGTKSQSIE 727

Query: 720 AFKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIF 779
            F D   WL+ E  K   IQR+KGLGEMNPEQLW+TT++P+ RR+L+V IED IAADQIF
Sbjct: 728 CFGDAQAWLLEEAKKGRQIQRFKGLGEMNPEQLWDTTVNPDTRRLLQVCIEDGIAADQIF 787

Query: 780 NTLMGDAVEPRRDFIESNALAVSNLDV 806
           +TLMGD VEPRR FIE+NAL V+ LD+
Sbjct: 788 STLMGDVVEPRRGFIENNALKVTRLDI 814



>gb|AAC38108.1| (AF008210) DNA gyrase subunit B [Buchnera aphidicola]
          Length = 803

 Score =  910 bits (2353), Expect = 0.0
 Identities = 443/806 (54%), Positives = 610/806 (75%), Gaps = 9/806 (1%)

Query: 5   NTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEISIT 64
           +TYDSS IK+L+GLDAVRKRPGMYIGDTDDG+GLHHMVFE+VDNSIDEALAG+C EI + 
Sbjct: 3   DTYDSSKIKILRGLDAVRKRPGMYIGDTDDGSGLHHMVFEIVDNSIDEALAGFCKEIKVV 62

Query: 65  IHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVGVSV 124
           IH+D S++++D+GRGIP DIH EE +SAAEVIMTVLH+GGKFD+ +YK+SGGLHGVG+SV
Sbjct: 63  IHSDNSVSIKDDGRGIPTDIHPEEKISAAEVIMTVLHSGGKFDNASYKISGGLHGVGISV 122

Query: 125 VNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSN-IHF 183
           VNALS +L L I ++ K + Q Y +G P+ PL  +G T+ +GT + F PS + F+N   F
Sbjct: 123 VNALSEKLELIIYKNKKKYRQQYENGNPESPLCIIGATEITGTYIRFWPSYKIFTNKTQF 182

Query: 184 SWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVN-EVFH 242
            ++IL+KR+RELSFLNS + I L+D RT  EE + Y+GG+KAF+++LN NK  +N  +F+
Sbjct: 183 QYEILSKRLRELSFLNSNILIHLKDNRTNLEEKYHYKGGIKAFIKFLNKNKFPINLNIFY 242

Query: 243 FNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIEAE 302
           F   + +  + +E+A+QWN+S  EN+LCFTNNIPQ+DGGTHL+GFR+ +TR LN +IE E
Sbjct: 243 FRCIKNQ--IELEIAIQWNNSHQENILCFTNNIPQKDGGTHLSGFRAGITRTLNLHIERE 300

Query: 303 GLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFADF 362
           G  KK K   TG+D REGLTAIIS+K+PDPKFSSQTKDKLVSSEVK+ +E  + +   ++
Sbjct: 301 GYNKKNKTIITGEDTREGLTAIISIKIPDPKFSSQTKDKLVSSEVKSVIESLINENLIEY 360

Query: 363 LLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSEL 422
           LLENP +AK ++ K+I++A+ REAAR+ARE+ ++KG LD+  LPGKL+DCQE DP LSE+
Sbjct: 361 LLENPIDAKFIIQKIINSAKIREAARRAREINKKKGTLDLGTLPGKLSDCQENDPKLSEI 420

Query: 423 YIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIGR 482
           Y+VEGDSAGGSAKQGRNR+ QAILPLKGKILNV+K +FDK++ SQE+ +LITALGC I +
Sbjct: 421 YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVQKTKFDKIILSQELTSLITALGCSITK 480

Query: 483 EEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVKRG 542
            EY++DKLRY++IIIMTDADVDG+HIRTLLLTFF+RQ+PELI++GY+YIAQPPLYKVK+G
Sbjct: 481 SEYSLDKLRYNHIIIMTDADVDGAHIRTLLLTFFYRQLPELIKKGYVYIAQPPLYKVKKG 540

Query: 543 KQEQYIKDDQAMEEYMTQSALEDASL--HVNEHAPGLSGAALEKLVNEYRGVIATLKRLS 600
           KQE+YIK+D+ M +Y  + AL++  +    NE+   +     +K+V+++  +   +K+  
Sbjct: 541 KQEKYIKNDEEMNKYQIKIALKEIVIKNKKNENCNKII-KEFQKIVSDFNHIQIKMKKNK 599

Query: 601 RLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERH 660
             +P+ +    IY P +   +L NE+ +Q W+EK   +L   +K+   Y + ++ +    
Sbjct: 600 NYFPELILNELIYHPRLY--NLKNENVVQNWIEKLVEKLNKKDKNNTIYTSKIKRNENDS 657

Query: 661 LWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISA 720
           ++ P ++L  +   +      DF  S +Y  ++ LG++     E+  +++KGE+   I+ 
Sbjct: 658 IFEPSIKLSRYANHTQYDLKNDFLESKEYFLITNLGEKFKKFQENENFIEKGEKIYKIND 717

Query: 721 FKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFN 780
            K+ L+WL+ E  +   +QRYKGLGEMNP+QLW TTM+P  R ML+VTI+DAI+A+ +FN
Sbjct: 718 IKNTLEWLIKETKRGFFVQRYKGLGEMNPDQLWNTTMNPETRNMLQVTIKDAISANNLFN 777

Query: 781 TLMGDAVEPRRDFIESNALAVSNLDV 806
           TLMGD VEPRR FI+ NAL   N+D+
Sbjct: 778 TLMGDLVEPRRKFIQKNALKAENIDI 803



>gb|AAM67582.1| (AE014076) DNA gyrase subunit B [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 803

 Score =  910 bits (2352), Expect = 0.0
 Identities = 443/806 (54%), Positives = 610/806 (75%), Gaps = 9/806 (1%)

Query: 5   NTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEISIT 64
           +TYDSS IK+L+GLDAVRKRPGMYIGDTDDG+GLHHMVFE+VDNSIDEALAG+C EI + 
Sbjct: 3   DTYDSSKIKILRGLDAVRKRPGMYIGDTDDGSGLHHMVFEIVDNSIDEALAGFCKEIKVV 62

Query: 65  IHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVGVSV 124
           IH+D S++++D+GRGIP DIH EE +SAAEVIMTVLH+GGKFD+ +YK+SGGLHGVG+SV
Sbjct: 63  IHSDNSVSIKDDGRGIPTDIHPEEKISAAEVIMTVLHSGGKFDNASYKISGGLHGVGISV 122

Query: 125 VNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSN-IHF 183
           VNALS +L L I ++ K + Q Y +G P+ PL  +G T+ +GT + F PS + F+N   F
Sbjct: 123 VNALSEKLELIIYKNKKKYRQQYKNGNPESPLCIIGATEITGTYIRFWPSYKIFTNKTQF 182

Query: 184 SWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVN-EVFH 242
            ++IL+KR+RELSFLNS + I L+D RT  EE + Y+GG+KAF+++LN NK  +N  +F+
Sbjct: 183 QYEILSKRLRELSFLNSNILIHLKDNRTNLEEKYHYKGGIKAFIKFLNKNKFPINLNIFY 242

Query: 243 FNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIEAE 302
           F   + +  + +E+A+QWN+S  EN+LCFTNNIPQ+DGGTHL+GFR+ +TR LN +IE E
Sbjct: 243 FRCIKNQ--IELEIAIQWNNSHQENILCFTNNIPQKDGGTHLSGFRAGITRTLNLHIERE 300

Query: 303 GLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFADF 362
           G  KK K   TG+D REGLTAIIS+K+PDPKFSSQTKDKLVSSEVK+ +E  + +   ++
Sbjct: 301 GYNKKNKTIITGEDTREGLTAIISIKIPDPKFSSQTKDKLVSSEVKSVIESLINENLIEY 360

Query: 363 LLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSEL 422
           LLENP +AK ++ K+I++A+ REAAR+ARE+ ++KG LD+  LPGKL+DCQE DP LSE+
Sbjct: 361 LLENPIDAKFIIQKIINSAKIREAARRAREINKKKGTLDLGTLPGKLSDCQENDPKLSEI 420

Query: 423 YIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIGR 482
           Y+VEGDSAGGSAKQGRNR+ QAILPLKGKILNV+K +FDK++ SQE+ +LITALGC I +
Sbjct: 421 YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVQKTKFDKIILSQELTSLITALGCSITK 480

Query: 483 EEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVKRG 542
            EY++DKLRY++IIIMTDADVDG+HIRTLLLTFF+RQ+PELI++GY+YIAQPPLYKVK+G
Sbjct: 481 SEYSLDKLRYNHIIIMTDADVDGAHIRTLLLTFFYRQLPELIKKGYVYIAQPPLYKVKKG 540

Query: 543 KQEQYIKDDQAMEEYMTQSALEDASL--HVNEHAPGLSGAALEKLVNEYRGVIATLKRLS 600
           KQE+YIK+D+ M +Y  + AL++  +    NE+   +     +K+V+++  +   +K+  
Sbjct: 541 KQEKYIKNDEEMNKYQIKIALKEIVIKNKKNENCNKII-KEFQKIVSDFNHIQIKMKKNK 599

Query: 601 RLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERH 660
             +P+ +    IY P +   +L NE+ +Q W+EK   +L   +K+   Y + ++ +    
Sbjct: 600 NYFPELILNELIYHPRLY--NLKNENVVQNWIEKLVEKLNKKDKNNTIYTSKIKRNENDS 657

Query: 661 LWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISA 720
           ++ P ++L  +   +      DF  S +Y  ++ LG++     E+  +++KGE+   I+ 
Sbjct: 658 IFEPSIKLSRYANHTQYDLKNDFLESKEYFLITNLGEKFKKFQENENFIEKGEKIYKIND 717

Query: 721 FKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFN 780
            K+ L+WL+ E  +   +QRYKGLGEMNP+QLW TTM+P  R ML+VTI+DAI+A+ +FN
Sbjct: 718 IKNTLEWLIKETKRGFFVQRYKGLGEMNPDQLWNTTMNPETRNMLQVTIKDAISANNLFN 777

Query: 781 TLMGDAVEPRRDFIESNALAVSNLDV 806
           TLMGD VEPRR FI+ NAL   N+D+
Sbjct: 778 TLMGDLVEPRRKFIQKNALKAENIDI 803



>dbj|BAB12738.1| (AP001118) DNA gyrase subunit B [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
          Length = 803

 Score =  910 bits (2351), Expect = 0.0
 Identities = 442/805 (54%), Positives = 602/805 (74%), Gaps = 7/805 (0%)

Query: 5   NTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEISIT 64
           N YDSS+IK+L+GLDAVRKRPGMYIGDTDDG+GLHHMVFE+VDNSIDEAL+GYC EI +T
Sbjct: 3   NIYDSSNIKILRGLDAVRKRPGMYIGDTDDGSGLHHMVFEIVDNSIDEALSGYCKEIIVT 62

Query: 65  IHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVGVSV 124
           IH+D S++V+D+GRGIP DIH EE +SAAEVI+TVLH+GGKFD+ +Y++SGGLHGVG+SV
Sbjct: 63  IHSDNSVSVKDDGRGIPTDIHPEENISAAEVILTVLHSGGKFDNASYQISGGLHGVGISV 122

Query: 125 VNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSN-IHF 183
           VNALS +L L I ++ K ++Q+Y HG P+ PL  +G TD +GT + F PS +TF+N I F
Sbjct: 123 VNALSEKLELIIDKNKKKYQQIYRHGKPENPLSIIGTTDTTGTYIRFWPSYKTFTNNIKF 182

Query: 184 SWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVN-EVFH 242
            ++IL+KR+RELSFLNS + I L D RT  +  + Y+GG+KAF+++LN  KT ++  +F+
Sbjct: 183 QYEILSKRLRELSFLNSNIAIYLEDNRTSIKNCYHYKGGIKAFIKFLNAKKTPIHTHIFY 242

Query: 243 FNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIEAE 302
           F  +  +D + +E+A+QWN+S  EN+LCFTNNIPQ+DGGTHLAGFRS +TR LN +IE E
Sbjct: 243 F--RSTKDQIELEIAMQWNNSHQENILCFTNNIPQKDGGTHLAGFRSGMTRTLNLHIERE 300

Query: 303 GLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFADF 362
           G  KK K    G+D REGLTAIIS+K+PDPKFSSQTKDKLVSSE ++ +E  + +   ++
Sbjct: 301 GYNKKNKTTIIGEDVREGLTAIISIKIPDPKFSSQTKDKLVSSEARSVIESLINENLIEY 360

Query: 363 LLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSEL 422
           LLENP+++K ++ K+I+AA+ REAAR+ARE+ ++K  LD+  LPGKL+DCQE DP  SE+
Sbjct: 361 LLENPSDSKFIIQKIINAAKVREAARRAREINKKKSILDLGALPGKLSDCQENDPKFSEI 420

Query: 423 YIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIGR 482
           Y+VEGDSAGGSAKQGRNR+ QAILPLKGKILNVEK++FDKM+ SQEV +LITALGCGIG+
Sbjct: 421 YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKSKFDKMILSQEVASLITALGCGIGK 480

Query: 483 EEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVKRG 542
            EYNIDKLRYH IIIMTDADVDG+HIRTLLLTFF+RQ+PELIE+GY+YIAQPPLYK+K+G
Sbjct: 481 NEYNIDKLRYHYIIIMTDADVDGAHIRTLLLTFFYRQLPELIEKGYVYIAQPPLYKLKKG 540

Query: 543 KQEQYIKDDQAMEEYMTQSALEDASLHVNEH-APGLSGAALEKLVNEYRGVIATLKRLSR 601
           ++E+YIK+D+ M  Y  ++AL+D  L   ++          +K+++EY  +   +K+   
Sbjct: 541 RKEKYIKNDEEMNTYQIKNALKDLVLKSEDNLIINQKLKKFKKIMSEYHYIQIIMKQSKH 600

Query: 602 LYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERHL 661
            +P+ +    IY     + +L +   ++ W+      L   + S   Y   ++E+ ++++
Sbjct: 601 YFPKLVFNELIY--HNHLHNLKDIEIVKEWIYTLAENLNKKDNSNNHYSIEIKENLDKNI 658

Query: 662 WLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISAF 721
           + P +++  +   +   F  +F  S +Y  ++ LG+       D   ++K      I + 
Sbjct: 659 FEPTIKISRYAHYTKYDFKEEFLKSKEYLLITNLGESFKKYFSDKVLIEKSGSTYKIDSI 718

Query: 722 KDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFNT 781
           K+   WL+ +  +   IQRYKGLGEMNPEQLW TTM+P  R ML+VTI+DA++A+ +FNT
Sbjct: 719 KNTWKWLIKQSKRGLFIQRYKGLGEMNPEQLWNTTMNPETRNMLQVTIKDAVSANNLFNT 778

Query: 782 LMGDAVEPRRDFIESNALAVSNLDV 806
           LMG+AVEPRR FIE+NAL   N+DV
Sbjct: 779 LMGEAVEPRRQFIENNALKAENIDV 803



>emb|CAB57885.1| (AJ249849) DNA gyrase B subunit [Photobacterium damselae subsp.
           piscicida]
          Length = 682

 Score =  905 bits (2338), Expect = 0.0
 Identities = 452/684 (66%), Positives = 548/684 (80%), Gaps = 4/684 (0%)

Query: 101 HAGGKFDDNTYKVSGGLHGVGVSVVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVG 160
           HAGGKFDDN+YKVSGGLHGVGVSVVNALS ++ LTI RH  +  Q+Y HGVPQ PL  +G
Sbjct: 1   HAGGKFDDNSYKVSGGLHGVGVSVVNALSEKVELTIYRHGHIHRQIYRHGVPQAPLEVIG 60

Query: 161 ETDGSGTEVHFKPSPETFSNIHFSWDILAKRIRELSFLNSGVGILLRDERT-GKEELFKY 219
           +TD +GT + F PS ETF+N  F ++ILAKR+RELSFLNSGV I L DER  GK++ F Y
Sbjct: 61  DTDRTGTTIRFWPSSETFTNTTFQYEILAKRLRELSFLNSGVSIKLNDEREEGKQDHFMY 120

Query: 220 EGGLKAFVEYLNTNKTAVNE-VFHFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQR 278
           EGG++AFVE+LN NKT +++ VFHFNV+RE DG+ VEVA+QWND F EN+ CFTNNIPQR
Sbjct: 121 EGGIQAFVEHLNRNKTPIHQKVFHFNVERE-DGITVEVAMQWNDGFQENIYCFTNNIPQR 179

Query: 279 DGGTHLAGFRSALTRNLNNYIEAEGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQT 338
           DGGTHLAGFR ALTR LNNY+E EG +KK K AT+GDDAREGLTA+ISVKVPDPKFSSQT
Sbjct: 180 DGGTHLAGFRGALTRTLNNYMEKEGYSKKAKAATSGDDAREGLTAVISVKVPDPKFSSQT 239

Query: 339 KDKLVSSEVKTAVEQEMGKYFADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKG 398
           KDKLVSSEVK+AVE  MG+   +FLLENP +AK V  K+IDA+RAREAARKAREMTRRKG
Sbjct: 240 KDKLVSSEVKSAVESTMGEKLGEFLLENPGDAKTVCTKIIDASRAREAARKAREMTRRKG 299

Query: 399 ALDIAGLPGKLADCQEKDPALSELYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKA 458
           ALD+AGLPGKLADCQEKDPALSELYIVEGDSAGGSAKQGRNR+ QAILPLKGKILNVEKA
Sbjct: 300 ALDLAGLPGKLADCQEKDPALSELYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKA 359

Query: 459 RFDKMLSSQEVGTLITALGCGIGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFR 518
           RFDKMLSSQEV TLITA+GCGIGR+EYN DKLRYH+IIIMTDADVDGSHIRTLLLTFF+R
Sbjct: 360 RFDKMLSSQEVATLITAMGCGIGRDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYR 419

Query: 519 QMPELIERGYIYIAQPPLYKVKRGKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLS 578
           QMPELIERG+IYIAQPPLYKVK+GKQEQYIKDD+ M+++ T  ALE+A+L   E AP ++
Sbjct: 420 QMPELIERGHIYIAQPPLYKVKKGKQEQYIKDDEDMQQFQTSLALENAALFTTEGAPAMA 479

Query: 579 GAALEKLVNEYRGVIATLKRLSRLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQAR 638
           G ALE LV +Y   +  ++R+SR YP  L    ++ P ++   L++ + ++ W+      
Sbjct: 480 GLALENLVGQYNSTMKLIERMSRRYPTLLLNELVHQPRLTA-MLSDRAQVEAWVTPVIEA 538

Query: 639 LTAAEKSGLTYKASLREDRERHLWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQ 698
           L A +     Y   +  D E + +LP+V +  HG+      + +   S +Y  ++ L ++
Sbjct: 539 LNAKQSGESHYTFDIVVDSENNHFLPKVVVRTHGVDHEYPLSFELICSKEYSKLADLSEE 598

Query: 699 LNSLLEDGAYVQKGERKRPISAFKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMD 758
           LN LL+D AYVQ+GERK+P+++FK+ L+WL  E  +  S+QRYKGLGEMNP+QLWETTMD
Sbjct: 599 LNGLLDDSAYVQRGERKQPVASFKEVLEWLNKESRRGLSLQRYKGLGEMNPDQLWETTMD 658

Query: 759 PNVRRMLKVTIEDAIAADQIFNTL 782
           P  RRM++VTI DA+AAD++F TL
Sbjct: 659 PESRRMMRVTINDAVAADELFTTL 682



>emb|CAE39678.1| (BX640436) DNA gyrase subunit B [Bordetella parapertussis]
          Length = 817

 Score =  902 bits (2332), Expect = 0.0
 Identities = 473/812 (58%), Positives = 593/812 (73%), Gaps = 14/812 (1%)

Query: 3   ENNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEIS 62
           EN  Y + SIK+LKGL+AVRKRPGMYIGDT DGTGLHHMVFEVVDN+IDEALAG+C +I 
Sbjct: 10  ENTGYGADSIKMLKGLEAVRKRPGMYIGDTSDGTGLHHMVFEVVDNAIDEALAGHCDDIV 69

Query: 63  ITIHTDESITVRDNGRGIPVDIHKEE--GVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGV 120
           +TIHTD SI+V DNGRGIP DIHK++  G SAAE++MT LHAGGKFD N+YKVSGGLHGV
Sbjct: 70  VTIHTDNSISVTDNGRGIPTDIHKDDEFGRSAAEIVMTELHAGGKFDQNSYKVSGGLHGV 129

Query: 121 GVSVVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSN 180
           GVS VNALS  LRLTIRR+ +V +  +  G    PL   G TD  GTEV F   P  F+N
Sbjct: 130 GVSCVNALSEWLRLTIRRNGQVHQMEFRQGQRVAPLTATGPTDKRGTEVRFLADPAIFTN 189

Query: 181 IHFSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVN-E 239
           I + ++IL+KR+RELSFLN+GV + L D+R GKEE F + GG+K FVEY+N +K+ ++  
Sbjct: 190 IEYHYEILSKRLRELSFLNNGVKVRLVDQRQGKEENFAFSGGVKGFVEYINRSKSVLHPN 249

Query: 240 VFHFNVQREEDGV--GVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNN 297
           VF  + +    GV  GVEVA+QWNDS++E++LCFTNNIPQRDGGTHL G R+A+TR LN 
Sbjct: 250 VFAVSAESSAGGVLVGVEVAMQWNDSYSESVLCFTNNIPQRDGGTHLTGLRAAMTRVLNK 309

Query: 298 YIEAEGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGK 357
           YI    LAKK K+ TTGDD REGL  ++SVKVP+PKFSSQTKDKLVSSEV+ AVE  + +
Sbjct: 310 YIADNELAKKAKVETTGDDMREGLACVLSVKVPEPKFSSQTKDKLVSSEVRPAVEDAVAR 369

Query: 358 YFADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDP 417
               +LLE+PN+AKA+ GK+++AARAREAARKAREMTRRK  L+ AGLPGKLADCQEKDP
Sbjct: 370 TLETWLLEHPNDAKALCGKIVEAARAREAARKAREMTRRKSVLEGAGLPGKLADCQEKDP 429

Query: 418 ALSELYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALG 477
           AL ELYIVEGDSAGGSAKQGR+R+ QAILPL+GK+LNVEKARFD++++S+++ TLITALG
Sbjct: 430 ALCELYIVEGDSAGGSAKQGRDRKFQAILPLRGKVLNVEKARFDRLIASEQIATLITALG 489

Query: 478 CGIGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLY 537
             IG  ++NIDKLRYH +IIMTDADVDG+HIRTLLLT  +RQMPEL+ RG++YIAQPPLY
Sbjct: 490 TSIG-PDFNIDKLRYHRLIIMTDADVDGAHIRTLLLTLLYRQMPELVARGHVYIAQPPLY 548

Query: 538 KVKRGKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLK 597
           KVK G+ E+Y+KDDQ   ++M Q AL+DA L  ++ A  + G AL +L  +Y    A + 
Sbjct: 549 KVKVGRDERYLKDDQEEAQFMLQLALKDAELIPSQGAAPIRGEALNELARQYVLADAVIS 608

Query: 598 RLSRLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDR 657
           RLSR++             + ++D     A    L    A   A+  +G+   A   +  
Sbjct: 609 RLSRVFDVAALSALAEGVEIDLEDAERTKASAQRLS--DALHAASPANGVEVVAEYDDVA 666

Query: 658 ERHLWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGE---- 713
           E+H     V  + HG       + DF    DY  ++        L+  GA V +GE    
Sbjct: 667 EKHRL--AVRRMHHGNVRVSVLDADFVRDADYAVLAKSAKTFLGLVGAGAIVARGEGDKR 724

Query: 714 RKRPISAFKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAI 773
           +++ +S F++ + WL  E  +  S QRYKGLGEMNPEQLWETTMDP VRR+L+V IEDAI
Sbjct: 725 KEQFVSDFREAMQWLRGEAERGLSKQRYKGLGEMNPEQLWETTMDPKVRRLLRVQIEDAI 784

Query: 774 AADQIFNTLMGDAVEPRRDFIESNALAVSNLD 805
           AAD++F TLMGD VEPRR FIE++AL+  N+D
Sbjct: 785 AADEVFTTLMGDDVEPRRAFIETHALSAGNID 816



>emb|CAE44818.1| (BX640412) DNA gyrase subunit B [Bordetella pertussis]
          Length = 817

 Score =  902 bits (2332), Expect = 0.0
 Identities = 473/812 (58%), Positives = 593/812 (73%), Gaps = 14/812 (1%)

Query: 3   ENNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEIS 62
           EN  Y + SIK+LKGL+AVRKRPGMYIGDT DGTGLHHMVFEVVDN+IDEALAG+C +I 
Sbjct: 10  ENTGYGADSIKMLKGLEAVRKRPGMYIGDTSDGTGLHHMVFEVVDNAIDEALAGHCDDIV 69

Query: 63  ITIHTDESITVRDNGRGIPVDIHKEE--GVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGV 120
           +TIHTD SI+V DNGRGIP DIHK++  G SAAE++MT LHAGGKFD N+YKVSGGLHGV
Sbjct: 70  VTIHTDNSISVTDNGRGIPTDIHKDDEFGRSAAEIVMTELHAGGKFDQNSYKVSGGLHGV 129

Query: 121 GVSVVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSN 180
           GVS VNALS  LRLTIRR+ +V +  +  G    PL   G TD  GTEV F   P  F+N
Sbjct: 130 GVSCVNALSEWLRLTIRRNGQVHQMEFRQGQRVAPLTATGPTDKRGTEVRFLADPAIFTN 189

Query: 181 IHFSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVN-E 239
           I + ++IL+KR+RELSFLN+GV + L D+R GKEE F + GG+K FVEY+N +K+ ++  
Sbjct: 190 IEYHYEILSKRLRELSFLNNGVKVRLVDQRQGKEENFAFSGGVKGFVEYINRSKSVLHLN 249

Query: 240 VFHFNVQREEDGV--GVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNN 297
           VF  + +    GV  GVEVA+QWNDS++E++LCFTNNIPQRDGGTHL G R+A+TR LN 
Sbjct: 250 VFAVSAESSAGGVLVGVEVAMQWNDSYSESVLCFTNNIPQRDGGTHLTGLRAAMTRVLNK 309

Query: 298 YIEAEGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGK 357
           YI    LAKK K+ TTGDD REGL  ++SVKVP+PKFSSQTKDKLVSSEV+ AVE  + +
Sbjct: 310 YIADNELAKKAKVETTGDDMREGLACVLSVKVPEPKFSSQTKDKLVSSEVRPAVEDAVAR 369

Query: 358 YFADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDP 417
               +LLE+PN+AKA+ GK+++AARAREAARKAREMTRRK  L+ AGLPGKLADCQEKDP
Sbjct: 370 TLETWLLEHPNDAKALCGKIVEAARAREAARKAREMTRRKSVLEGAGLPGKLADCQEKDP 429

Query: 418 ALSELYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALG 477
           AL ELYIVEGDSAGGSAKQGR+R+ QAILPL+GK+LNVEKARFD++++S+++ TLITALG
Sbjct: 430 ALCELYIVEGDSAGGSAKQGRDRKFQAILPLRGKVLNVEKARFDRLIASEQIATLITALG 489

Query: 478 CGIGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLY 537
             IG  ++NIDKLRYH +IIMTDADVDG+HIRTLLLT  +RQMPEL+ RG++YIAQPPLY
Sbjct: 490 TSIG-PDFNIDKLRYHRLIIMTDADVDGAHIRTLLLTLLYRQMPELVARGHVYIAQPPLY 548

Query: 538 KVKRGKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLK 597
           KVK G+ E+Y+KDDQ   ++M Q AL+DA L  ++ A  + G AL +L  +Y    A + 
Sbjct: 549 KVKVGRDERYLKDDQEEAQFMLQLALKDAELIPSQGAAPIRGEALNELARQYVLADAVIS 608

Query: 598 RLSRLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDR 657
           RLSR++             + ++D     A    L    A   A+  +G+   A   +  
Sbjct: 609 RLSRVFDVAALSALAEGVEIDLEDAERTKASAQRLS--DALHAASPANGVEVVAEYDDVA 666

Query: 658 ERHLWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGE---- 713
           E+H     V  + HG       + DF    DY  ++        L+  GA V +GE    
Sbjct: 667 EKHRL--AVRRMHHGNVRVSVLDADFVRGADYAVLAKSAKTFLGLVGAGAIVARGEGDKR 724

Query: 714 RKRPISAFKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAI 773
           +++ +S F++ + WL  E  +  S QRYKGLGEMNPEQLWETTMDP VRR+L+V IEDAI
Sbjct: 725 KEQFVSDFREAMQWLRGEAERGLSKQRYKGLGEMNPEQLWETTMDPKVRRLLRVQIEDAI 784

Query: 774 AADQIFNTLMGDAVEPRRDFIESNALAVSNLD 805
           AAD++F TLMGD VEPRR FIE++AL+  N+D
Sbjct: 785 AADEVFTTLMGDDVEPRRAFIETHALSAGNID 816



>emb|CAE35351.1| (BX640452) DNA gyrase subunit B [Bordetella bronchiseptica]
          Length = 817

 Score =  902 bits (2332), Expect = 0.0
 Identities = 473/812 (58%), Positives = 593/812 (73%), Gaps = 14/812 (1%)

Query: 3   ENNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEIS 62
           EN  Y + SIK+LKGL+AVRKRPGMYIGDT DGTGLHHMVFEVVDN+IDEALAG+C +I 
Sbjct: 10  ENTGYGADSIKMLKGLEAVRKRPGMYIGDTSDGTGLHHMVFEVVDNAIDEALAGHCDDIV 69

Query: 63  ITIHTDESITVRDNGRGIPVDIHKEE--GVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGV 120
           +TIHTD SI+V DNGRGIP DIHK++  G SAAE++MT LHAGGKFD N+YKVSGGLHGV
Sbjct: 70  VTIHTDNSISVTDNGRGIPTDIHKDDEFGRSAAEIVMTELHAGGKFDQNSYKVSGGLHGV 129

Query: 121 GVSVVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSN 180
           GVS VNALS  LRLTIRR+ +V +  +  G    PL   G TD  GTEV F   P  F+N
Sbjct: 130 GVSCVNALSEWLRLTIRRNGQVHQMEFRQGQRVAPLTATGPTDKRGTEVRFLADPAIFTN 189

Query: 181 IHFSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVN-E 239
           I + ++IL+KR+RELSFLN+GV + L D+R GKEE F + GG+K FVEY+N +K+ ++  
Sbjct: 190 IEYHYEILSKRLRELSFLNNGVKVRLVDQRQGKEENFAFSGGVKGFVEYINRSKSVLHPN 249

Query: 240 VFHFNVQREEDGV--GVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNN 297
           VF  + +    GV  GVEVA+QWNDS++E++LCFTNNIPQRDGGTHL G R+A+TR LN 
Sbjct: 250 VFAVSAESSAGGVLVGVEVAMQWNDSYSESVLCFTNNIPQRDGGTHLTGLRAAMTRVLNK 309

Query: 298 YIEAEGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGK 357
           YI    LAKK K+ TTGDD REGL  ++SVKVP+PKFSSQTKDKLVSSEV+ AVE  + +
Sbjct: 310 YIADNELAKKAKVETTGDDMREGLACVLSVKVPEPKFSSQTKDKLVSSEVRPAVEDAVAR 369

Query: 358 YFADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDP 417
               +LLE+PN+AKA+ GK+++AARAREAARKAREMTRRK  L+ AGLPGKLADCQEKDP
Sbjct: 370 TLETWLLEHPNDAKALCGKIVEAARAREAARKAREMTRRKSVLEGAGLPGKLADCQEKDP 429

Query: 418 ALSELYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALG 477
           AL ELYIVEGDSAGGSAKQGR+R+ QAILPL+GK+LNVEKARFD++++S+++ TLITALG
Sbjct: 430 ALCELYIVEGDSAGGSAKQGRDRKFQAILPLRGKVLNVEKARFDRLIASEQIATLITALG 489

Query: 478 CGIGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLY 537
             IG  ++NIDKLRYH +IIMTDADVDG+HIRTLLLT  +RQMPEL+ RG++YIAQPPLY
Sbjct: 490 TSIG-PDFNIDKLRYHRLIIMTDADVDGAHIRTLLLTLLYRQMPELVARGHVYIAQPPLY 548

Query: 538 KVKRGKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLK 597
           KVK G+ E+Y+KDDQ   ++M Q AL+DA L  ++ A  + G AL +L  +Y    A + 
Sbjct: 549 KVKVGRDERYLKDDQEEAQFMLQLALKDAELIPSQGAAPIRGEALNELARQYVLADAVIS 608

Query: 598 RLSRLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDR 657
           RLSR++             + ++D     A    L    A   A+  +G+   A   +  
Sbjct: 609 RLSRVFDVAALSALAEGVEIDLEDAERTKASAQRLS--DALHAASPANGVEVVAEYDDVA 666

Query: 658 ERHLWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGE---- 713
           E+H     V  + HG       + DF    DY  ++        L+  GA V +GE    
Sbjct: 667 EKHRL--AVRRMHHGNVRVSVLDADFVRGADYAVLAKSAKTFLGLVGAGAIVARGEGDKR 724

Query: 714 RKRPISAFKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAI 773
           +++ +S F++ + WL  E  +  S QRYKGLGEMNPEQLWETTMDP VRR+L+V IEDAI
Sbjct: 725 KEQFVSDFREAMQWLRGEAERGLSKQRYKGLGEMNPEQLWETTMDPKVRRLLRVQIEDAI 784

Query: 774 AADQIFNTLMGDAVEPRRDFIESNALAVSNLD 805
           AAD++F TLMGD VEPRR FIE++AL+  N+D
Sbjct: 785 AADEVFTTLMGDDVEPRRAFIETHALSAGNID 816



>gb|AAO26754.1| (AE014016) putative DNA gyrase subunit b [Buchnera aphidicola str.
           Bp (Baizongia pistaciae)]
          Length = 804

 Score =  900 bits (2327), Expect = 0.0
 Identities = 453/806 (56%), Positives = 595/806 (73%), Gaps = 8/806 (0%)

Query: 5   NTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEISIT 64
           NTY SS+IK+LKGLDAV+KRPGMYIG+TDDGTGLHHMVFEVVDNSIDEALAG+C  I +T
Sbjct: 3   NTYTSSNIKILKGLDAVKKRPGMYIGNTDDGTGLHHMVFEVVDNSIDEALAGFCKNIIVT 62

Query: 65  IHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVGVSV 124
           IH D SI+++D+GRGIP DIH EEG+SAAEVIMTVLHAGGKFD+ +YKVSGGLHGVGVSV
Sbjct: 63  IHDDNSISIQDDGRGIPTDIHDEEGISAAEVIMTVLHAGGKFDNTSYKVSGGLHGVGVSV 122

Query: 125 VNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSNI-HF 183
           VNALS +L L I R  K++ Q+Y +G P+  L  +G T  +GT++ F P+ E F+N+  F
Sbjct: 123 VNALSKKLELFIYRDKKIYYQIYKNGYPKNTLSIIGYTKITGTKIRFWPNLEIFTNVTQF 182

Query: 184 SWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVN-EVFH 242
           +W+IL+KR+RELSFLNS V I L D +    E F  +GGLK F+ YLN NK  ++ ++F+
Sbjct: 183 NWEILSKRLRELSFLNSNVSIYLDDAKKHINENFYQQGGLKEFIIYLNKNKKPIHSKIFY 242

Query: 243 FNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIEAE 302
           F+ ++  + V VE+A+QWN  F EN+ C+TNNIPQ+DGGTHL+GFRSALTR +NNY++ E
Sbjct: 243 FSSKK--NNVEVEIAMQWNKGFQENIYCYTNNIPQQDGGTHLSGFRSALTRTMNNYLDKE 300

Query: 303 GLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFADF 362
           G  KK KI   GDD REGLTAIIS+K+ DPKFSSQTK+KLVSSEVK+A+E  + ++  +F
Sbjct: 301 GYIKKNKINIIGDDTREGLTAIISIKINDPKFSSQTKNKLVSSEVKSALESLVNEFLMEF 360

Query: 363 LLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSEL 422
           LLENP E+K +V K+I+++R R AAR+AREMTR+KG LD+ GLPGKL+DCQE+DPALSE+
Sbjct: 361 LLENPQESKNIVTKIIESSRVRNAARRAREMTRKKGTLDLIGLPGKLSDCQERDPALSEI 420

Query: 423 YIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIGR 482
           Y+VEGDSAGGSAKQ RNR+ QAILPLKGKILNVEKAR++KMLSSQEV TLITALGCGIG+
Sbjct: 421 YLVEGDSAGGSAKQARNRKNQAILPLKGKILNVEKARYEKMLSSQEVTTLITALGCGIGK 480

Query: 483 EEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVKRG 542
            EYN +KLRYH IIIMTDADVDGSHIRTLLLTFF+R MPE+I+RGY+YIAQPPLYKV + 
Sbjct: 481 NEYNPEKLRYHRIIIMTDADVDGSHIRTLLLTFFYRYMPEIIQRGYLYIAQPPLYKVTKN 540

Query: 543 KQEQYIKDDQAMEEYMTQSALEDASLHVN--EHAPGLSGAALEKLVNEYRGVIATLKRLS 600
            + +YIKD   ME Y   +ALE+  L  N  +         L+K+++EY+ +     ++ 
Sbjct: 541 NKTRYIKDKNTMENYKLSTALENTILESNTDKEIKIKCNYTLKKIISEYKIIQTIFFKIK 600

Query: 601 RLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERH 660
             +P  +    +Y P   +++L +E  +  W+  F  +L     S   Y A +  + +  
Sbjct: 601 DNFPLNILNEMLYHP--KLNNLNDEVYVNNWINNFVIQLQKKSSSTRNYSAHITFNSKDK 658

Query: 661 LWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISA 720
           ++ P +++  +       F+  F  S +Y+ +  LG +L  +++   +++K  +   I  
Sbjct: 659 IFEPLIKIQKNAEVKEYKFDITFINSYEYQKIYSLGKKLQEMIQKNIHIKKNNKTYSIKN 718

Query: 721 FKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFN 780
           F+   + L+    K   IQRYKGLGEMNPEQLW+TTM+P  RRMLK+T+ +    +++FN
Sbjct: 719 FQKNFELLIQNSFKNVLIQRYKGLGEMNPEQLWKTTMNPETRRMLKITLHNIDTTNKLFN 778

Query: 781 TLMGDAVEPRRDFIESNALAVSNLDV 806
           TLMGD+VEPR+ FIE  AL  SN+D+
Sbjct: 779 TLMGDSVEPRKLFIELYALKASNIDI 804



>gb|AAF40668.1| (AE002378) DNA gyrase subunit B [Neisseria meningitidis MC58]
          Length = 796

 Score =  894 bits (2309), Expect = 0.0
 Identities = 469/807 (58%), Positives = 580/807 (71%), Gaps = 20/807 (2%)

Query: 3   ENNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEIS 62
           ++  Y + SI+VL+GL+AVRKRPGMYIGDT DG+GLHHMVFEV+DN+IDEALAG+C +I+
Sbjct: 5   KHEEYGADSIQVLEGLEAVRKRPGMYIGDTQDGSGLHHMVFEVLDNAIDEALAGHCDKIT 64

Query: 63  ITIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVGV 122
           +TIH D S++V DNGRG+P  IH +EG SAAEVIMTVLHAGGKFD+N+YK+SGGLHGVGV
Sbjct: 65  VTIHADHSVSVADNGRGMPTGIHPKEGRSAAEVIMTVLHAGGKFDNNSYKISGGLHGVGV 124

Query: 123 SVVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSNIH 182
           SVVNALS  + LTI R  K     +  G  + PL+ VG++D  GT V F  S ETF N+ 
Sbjct: 125 SVVNALSDWVTLTIYRDGKEHFVRFVRGETEEPLKIVGDSDKKGTTVRFLASTETFGNVE 184

Query: 183 FSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVNEVFH 242
           +S+DILAKRIRELSFLN+GV I L DER GK E F   GG+  FV+Y+N  KT ++E   
Sbjct: 185 YSFDILAKRIRELSFLNNGVDIELTDERDGKHESFALSGGVAGFVQYMNRKKTPLHEKI- 243

Query: 243 FNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIEAE 302
           F    E+DG+ VE A+QWNDS+ E++ CFTNNIPQRDGGTHL   R  +TR +NNYIEA 
Sbjct: 244 FYAFGEKDGMSVECAMQWNDSYQESVQCFTNNIPQRDGGTHLTALRQVMTRTINNYIEAN 303

Query: 303 GLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFADF 362
            +AKK K+ T GDD REGLT ++SVK+PDPKFSSQTKDKLVS E+   V + + +   DF
Sbjct: 304 EVAKKAKVETAGDDMREGLTCVLSVKLPDPKFSSQTKDKLVSGEIGPVVNEVISQALTDF 363

Query: 363 LLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSEL 422
           L ENPNEAK + GK++DAARAREAARKARE+TRRKG +D  GLPGKLADCQEKDPALSEL
Sbjct: 364 LEENPNEAKIITGKIVDAARAREAARKAREITRRKGVMDGLGLPGKLADCQEKDPALSEL 423

Query: 423 YIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIGR 482
           Y+VEGDSAGGSA QGR+R+ QAILPLKGKILNVEKARF+KML+SQEV TLITALG GIG+
Sbjct: 424 YLVEGDSAGGSAMQGRDRKFQAILPLKGKILNVEKARFEKMLASQEVATLITALGAGIGK 483

Query: 483 EEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVKRG 542
           EE+N +KLRYH IIIMTDADVDG+HIRTLLLTFF+RQMPEL+ERGYIYIAQPPLYK K G
Sbjct: 484 EEFNAEKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQMPELVERGYIYIAQPPLYKAKYG 543

Query: 543 KQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLSRL 602
           KQE+Y+KD+   ++++   ALE A +  +     + GA L     ++      +++ SR 
Sbjct: 544 KQERYLKDELEKDQWLLGLALEKAKIISDGRT--IEGAELADTAKQFLLAKTVIEQESRF 601

Query: 603 YPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLR----EDRE 658
             + +    ++   + +    N            A    AE SGL  +  +     E  E
Sbjct: 602 VDELVLRAMLHASPIDLTSSEN------------ADKAVAELSGLLDEKEVALERIEGHE 649

Query: 659 RHLWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPI 718
            H ++ ++    HG          F  S  Y++++     L  ++ +GA + KGE     
Sbjct: 650 GHRFI-KITRKLHGNVMVSYIEPKFLNSKAYQTLTQTAAALKGMVGEGAKLYKGENGYDA 708

Query: 719 SAFKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQI 778
            +F+  LD LM+   K  SIQRYKGLGEMNPEQLWETTMDP VRR+LKV IEDAIAAD++
Sbjct: 709 DSFETALDILMSVAQKGMSIQRYKGLGEMNPEQLWETTMDPAVRRLLKVRIEDAIAADEV 768

Query: 779 FNTLMGDAVEPRRDFIESNALAVSNLD 805
           F TLMGD VEPRR FIE+NAL   N+D
Sbjct: 769 FVTLMGDEVEPRRAFIENNALIAQNID 795



>emb|CAB57876.1| (AJ249850) DNA gyrase B subunit [Photobacterium damselae subsp.
           damselae]
          Length = 676

 Score =  893 bits (2307), Expect = 0.0
 Identities = 445/677 (65%), Positives = 541/677 (79%), Gaps = 3/677 (0%)

Query: 108 DNTYKVSGGLHGVGVSVVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGT 167
           DN+YKVSGGLHGVGVSVVNALS ++ LTI RH  +  Q+Y HGVPQ PL  +G+TD +GT
Sbjct: 1   DNSYKVSGGLHGVGVSVVNALSEKVELTIYRHGHIHRQIYRHGVPQAPLEVIGDTDRTGT 60

Query: 168 EVHFKPSPETFSNIHFSWDILAKRIRELSFLNSGVGILLRDERT-GKEELFKYEGGLKAF 226
            + F PS ETF+N  F ++ILAKR+RELSFLNSGV I L DER  GK++ F YEGG++AF
Sbjct: 61  TIRFWPSSETFTNTTFQYEILAKRLRELSFLNSGVSIKLNDEREEGKQDHFMYEGGIQAF 120

Query: 227 VEYLNTNKTAVNE-VFHFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLA 285
           VE+LN NKT +++ VFHFNV+RE DG+ VEVA+QWND F EN+ CFTNNIPQRDGGTHLA
Sbjct: 121 VEHLNRNKTPIHQKVFHFNVERE-DGITVEVAMQWNDGFQENIYCFTNNIPQRDGGTHLA 179

Query: 286 GFRSALTRNLNNYIEAEGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSS 345
           GFR ALTR LNNY+E EG +KK K AT+GDDAREGLTA+ISVKVPDPKFSSQTKDKLVSS
Sbjct: 180 GFRGALTRTLNNYMEKEGYSKKAKAATSGDDAREGLTAVISVKVPDPKFSSQTKDKLVSS 239

Query: 346 EVKTAVEQEMGKYFADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGL 405
           EVK+AVE  MG+   +FLLENP +AK V  K+IDA+RAREAARKAREMTRRKGALD+AGL
Sbjct: 240 EVKSAVESTMGEKLGEFLLENPGDAKTVCTKIIDASRAREAARKAREMTRRKGALDLAGL 299

Query: 406 PGKLADCQEKDPALSELYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLS 465
           PGKLADCQEKDPALSELYIVEGDSAGGSAKQGRNR+ QAILPLKGKILNVEKARFDKMLS
Sbjct: 300 PGKLADCQEKDPALSELYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLS 359

Query: 466 SQEVGTLITALGCGIGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIE 525
           SQEV TLITA+GCGIGR+EYN DKLRYH+IIIMTDADVDGSHIRTLLLTFF+RQMPELIE
Sbjct: 360 SQEVATLITAMGCGIGRDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPELIE 419

Query: 526 RGYIYIAQPPLYKVKRGKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKL 585
           RG+IYIAQPPLYKVK+GKQEQYIKDD+ M+++ T  ALE+A+L   E AP ++G ALE L
Sbjct: 420 RGHIYIAQPPLYKVKKGKQEQYIKDDEDMQQFQTSLALENAALFTTEGAPAMAGLALENL 479

Query: 586 VNEYRGVIATLKRLSRLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKS 645
           V +Y   +  ++R+SR YP  L    ++ P ++ + L++ + ++ W+      L A +  
Sbjct: 480 VGQYNSTMKLIERMSRRYPTLLLNELVHQPRLTAEMLSDRAQVEAWVTPVIEALNAKQSG 539

Query: 646 GLTYKASLREDRERHLWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLED 705
              Y   +  D E + +LP+V +  HG+      + +   S +Y  ++ L + LN LL+D
Sbjct: 540 ESHYTFDIVVDSENNHFLPKVVVRTHGVDHEYPLSFELICSKEYSKLADLSEVLNGLLDD 599

Query: 706 GAYVQKGERKRPISAFKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRML 765
            AYVQ+GERK+P+++FK+ L+WL  E  +  S+QRYKGLGEMNP+QLWETTMDP  RRM+
Sbjct: 600 SAYVQRGERKQPVASFKEVLEWLNKESRRGLSLQRYKGLGEMNPDQLWETTMDPESRRMM 659

Query: 766 KVTIEDAIAADQIFNTL 782
           +VTI DA+AAD++F TL
Sbjct: 660 RVTINDAVAADELFTTL 676



>emb|CAB83373.1| (AL162752) DNA gyrase subunit B [Neisseria meningitidis Z2491]
          Length = 796

 Score =  887 bits (2292), Expect = 0.0
 Identities = 466/807 (57%), Positives = 578/807 (71%), Gaps = 20/807 (2%)

Query: 3   ENNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEIS 62
           ++  Y + SI+VL+GL+AVRKRPGMYIGDT DG+GLHHMVFEV+DN+IDEALAG+C +I+
Sbjct: 5   KHEEYGADSIQVLEGLEAVRKRPGMYIGDTQDGSGLHHMVFEVLDNAIDEALAGHCDKIT 64

Query: 63  ITIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVGV 122
           +TIH D S++V DNGRG+P  IH +EG SAAEVIMTVLHAGGKFD+N+YK+SGGLHGVGV
Sbjct: 65  VTIHADHSVSVADNGRGMPTGIHPKEGRSAAEVIMTVLHAGGKFDNNSYKISGGLHGVGV 124

Query: 123 SVVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSNIH 182
           SVVNALS  + LTI R  K     +  G  + PL+ VG++D  GT V F  S ETF N+ 
Sbjct: 125 SVVNALSDWVTLTIYRDGKEHFVRFVRGETEEPLKVVGDSDKKGTTVRFLASTETFGNVE 184

Query: 183 FSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVNEVFH 242
           +S+DILAKRIRELSFLN+GV I L DER GK E F   GG+  FV+Y+N  KT ++E   
Sbjct: 185 YSFDILAKRIRELSFLNNGVDIELTDERDGKHESFALSGGVAGFVQYMNRKKTPLHEKI- 243

Query: 243 FNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIEAE 302
           F    E+DG+ VE A+QWNDS+ E++ CFTNNIPQRDGGTHL   R  +TR +N+YIEA 
Sbjct: 244 FYAFGEKDGMSVECAMQWNDSYQESVQCFTNNIPQRDGGTHLTALRQVMTRTINSYIEAN 303

Query: 303 GLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFADF 362
            +AKK K+ T GDD REGLT ++SVK+PDPKFSSQTKDKLVS E+   V + + +   DF
Sbjct: 304 EVAKKAKVETAGDDMREGLTCVLSVKLPDPKFSSQTKDKLVSGEIGPVVNEVISQALTDF 363

Query: 363 LLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSEL 422
           L ENP EAK + GK++DAARAREAARKARE+TRRKG +D  GLPGKLADCQEKDPALSEL
Sbjct: 364 LEENPAEAKIITGKIVDAARAREAARKAREITRRKGVMDGLGLPGKLADCQEKDPALSEL 423

Query: 423 YIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIGR 482
           Y+VEGDSAGGSA QGR+R+ QAILPLKGKILNVEKARF+KML+SQEV  LITALG GIG+
Sbjct: 424 YLVEGDSAGGSAMQGRDRKFQAILPLKGKILNVEKARFEKMLASQEVAALITALGAGIGK 483

Query: 483 EEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVKRG 542
           EE+N +KLRYH IIIMTDADVDG+HIRTLLLTFF+RQMPEL+ERGYIYIAQPPLYK K G
Sbjct: 484 EEFNAEKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQMPELVERGYIYIAQPPLYKAKYG 543

Query: 543 KQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLSRL 602
           KQE+Y+KD+   ++++   ALE A +  +     + GA L     ++      +++ SR 
Sbjct: 544 KQERYLKDELEKDQWLLGLALEKAKIISDGRT--IEGAELADTAKQFLLAKTVIEQESRF 601

Query: 603 YPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLR----EDRE 658
             + +    ++   + +    N            A    AE SGL  +  +     E  E
Sbjct: 602 VDELVLRAMLHASPIDLTSSEN------------ADKAVAELSGLLDEKEVALERIEGHE 649

Query: 659 RHLWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPI 718
            H ++ ++    HG          F  S  Y++++     L  ++ +GA + KGE     
Sbjct: 650 GHRFI-KITRKLHGNVMVSYIEPKFLNSKAYQTLTQTAAALKGMVGEGAKLYKGENGYDA 708

Query: 719 SAFKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQI 778
            +F+  LD LM+   K  SIQRYKGLGEMNPEQLWETTMDP VRR+LKV IEDAIAAD++
Sbjct: 709 DSFETALDILMSVAQKGMSIQRYKGLGEMNPEQLWETTMDPAVRRLLKVRIEDAIAADEV 768

Query: 779 FNTLMGDAVEPRRDFIESNALAVSNLD 805
           F TLMGD VEPRR FIE+NAL   N+D
Sbjct: 769 FVTLMGDEVEPRRAFIENNALIAQNID 795



  Database: gbbct
    Posted date:  Sep 29, 2003  6:22 PM
  Number of letters in database: 35,829,034
  Number of sequences in database:  119,422
  
  Database: /blastdb/gbbct/gbbct2.aso
    Posted date:  Sep 29, 2003  6:23 PM
  Number of letters in database: 46,604,961
  Number of sequences in database:  153,703
  
  Database: /blastdb/gbbct/gbbct3.aso
    Posted date:  Sep 29, 2003  6:24 PM
  Number of letters in database: 37,964,456
  Number of sequences in database:  126,043
  
  Database: /blastdb/gbbct/gbbct4.aso
    Posted date:  Sep 29, 2003  6:29 PM
  Number of letters in database: 44,801,584
  Number of sequences in database:  150,186
  
  Database: /blastdb/gbbct/gbbct5.aso
    Posted date:  Sep 29, 2003  6:29 PM
  Number of letters in database: 3,182,186
  Number of sequences in database:  10,611
  
Lambda     K      H
   0.316    0.135    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 266,163,533
Number of Sequences: 559965
Number of extensions: 11615784
Number of successful extensions: 39456
Number of sequences better than 1.0e-02: 100
Number of HSP's better than  0.0 without gapping: 2243
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 31278
Number of HSP's gapped (non-prelim): 2894
length of query: 806
length of database: 168,382,221
effective HSP length: 125
effective length of query: 681
effective length of database: 98,386,596
effective search space: 67001271876
effective search space used: 67001271876
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 99 (42.7 bits)