Score E
Sequences producing significant alignments: (bits) Value
gnl|CDD|22022 KOG4246, KOG4246, Predicted DNA-binding prote... 37 0.011
gnl|CDD|21353 KOG3570, KOG3570, MAPK-activating protein DEN... 37 0.019
gnl|CDD|19858 KOG2072, KOG2072, Translation initiation fact... 34 0.14
gnl|CDD|18919 KOG1129, KOG1129, TPR repeat-containing prote... 33 0.24
gnl|CDD|22065 KOG4289, KOG4289, Cadherin EGF LAG seven-pass... 33 0.27
gnl|CDD|19770 KOG1984, KOG1984, Vesicle coat complex COPII,... 33 0.28
gnl|CDD|20088 KOG2302, KOG2302, T-type voltage-gated Ca2+ c... 32 0.44
gnl|CDD|17959 KOG0162, KOG0162, Myosin class I heavy chain ... 32 0.54
gnl|CDD|22494 KOG4721, KOG4721, Serine/threonine protein ki... 30 1.7
gnl|CDD|19710 KOG1924, KOG1924, RhoA GTPase effector DIA/Di... 29 4.3
gnl|CDD|26436 pfam05790, CD2, T-cell surface antigen CD2 pr... 28 5.0
gnl|CDD|18846 KOG1053, KOG1053, Glutamate-gated NMDA-type i... 28 5.4
gnl|CDD|22348 KOG4573, KOG4573, Phosphoprotein involved in ... 29 5.5
gnl|CDD|19908 KOG2122, KOG2122, Beta-catenin-binding protei... 28 6.6
gnl|CDD|19709 KOG1923, KOG1923, Rac1 GTPase effector FRL [S... 28 6.7
gnl|CDD|21673 KOG3895, KOG3895, Synaptic vesicle protein Sy... 28 7.6
gnl|CDD|18187 KOG0391, KOG0391, SNF2 family DNA-dependent A... 28 7.8
gnl|CDD|21295 KOG3511, KOG3511, Sortilin and related recept... 28 8.9
gnl|CDD|23866 pfam05642, Sporozoite_P67, Sporozoite P67 sur... 28 9.0
gnl|CDD|19942 KOG2156, KOG2156, Tubulin-tyrosine ligase-rel... 28 9.5
>gnl|CDD|22022 KOG4246, KOG4246, Predicted DNA-binding protein, contains SAP domain
[General function prediction only]
Length = 1194
Score = 37.5 bits (86), Expect = 0.011
Identities = 45/225 (20%), Positives = 57/225 (25%), Gaps = 37/225 (16%)
Query: 401 LRGSAGVAVLLPAA-HLDTTRTAPAQRRGRGAAHRRLDLLRRLRLPATPHAPMRQATAGA 459
Sbjct: 197 FKWNAQRIQHLGGRLQSDPHGLSVRNTSSYQPQHTPQLLGAVPRRPL-DDYIYPASSSNP 255
Query: 460 GR----PPGELHRLRRRSAVAAGSPPPARRGTPPGIAPRSPAGPRSAGPAGRRRLPPALR 515
Sbjct: 256 GYGVSLPPGRDYGTGKHSAASLDLDPPARTGSA----------PRVARLRKGDRASY-LR 304
Query: 516 RLTLRAPPAMSVRCRRAAVAAIPAAACRASSPTVQGRREPRRFPRRCARHPVRPPRSARG 575
Sbjct: 305 RFDLREEERRREDQRA-----------RDKSRERERERERDR---------ERSPQRERS 344
Query: 576 FPVSAVRRWCRPVPVRGSVVPRRPGTASDRPAPEPSRPGVVAGRR 620
Sbjct: 345 RQRSRRRERERIPRRRERQGPRYRERKRKLELKRPRTPTARLRSR 389
>gnl|CDD|21353 KOG3570, KOG3570, MAPK-activating protein DENN [Signal transduction
mechanisms]
Length = 1588
Score = 36.6 bits (84), Expect = 0.019
Identities = 20/143 (13%), Positives = 43/143 (30%), Gaps = 9/143 (6%)
Query: 412 PAAHLDTTRTAPAQRRGRGAAHRRLDLLRRLRLPATPHAPMRQATAGAGRPPGELHRLRR 471
Sbjct: 1036 RKRSPTESVNTPVGKDPGLAGRGDPKAMAQLRVPQLG--PRAPSATGKGPKELDTRSLKE 1093
Query: 472 RSAVAAGSPPPARRGTPPGIAPRSPAGPRSAGPAGRRRLPPALR---RLTLRAPPAMSVR 528
Sbjct: 1094 ENFIASIGPEVIKPVFDLGETE--EKKSQISADSGVSLTSSSQRTDQDSVIGVSPAVMI- 1150
Query: 529 CRRAAVAAIPAAACRASSPTVQG 551
Sbjct: 1151 -RSSSQDSEVSTVVSNSSGETLG 1172
>gnl|CDD|19858 KOG2072, KOG2072, Translation initiation factor 3, subunit a (eIF-3a)
[Translation, ribosomal structure and biogenesis]
Length = 988
Score = 33.8 bits (77), Expect = 0.14
Identities = 27/142 (19%), Positives = 37/142 (26%), Gaps = 8/142 (5%)
Query: 424 AQRRGRGAAHRRLDLLRRLRLPATPHAPMRQATAGAGRPPGELHRLRRRSAVAAGSP--- 480
Sbjct: 841 ENRVAKKEKQRQRETEERERRINEERRLMRSTPSRLPEETVGDRDWRAGPDAISPSPRAP 900
Query: 481 --PPARRGTPPGIAPRSPAGPRSAGPAGRRRLPPALRRLTLRAPPA---MSVRCRRAAVA 535
Sbjct: 901 EEAEWRRGAGRTAGGSSRRSPRFSRDDVDRNGDRVPPRGDPSRGPSKATGADKWRNKREP 960
Query: 536 AIPAAACRASSPTVQGRREPRR 557
Sbjct: 961 SGPPKRDRWSGPRDDRRFGPRR 982
>gnl|CDD|18919 KOG1129, KOG1129, TPR repeat-containing protein [General function
prediction only]
Length = 478
Score = 33.1 bits (75), Expect = 0.24
Identities = 26/97 (26%), Positives = 34/97 (35%), Gaps = 4/97 (4%)
Query: 96 PAIRPGRA-AADLSRRRLPVAARRPARRVAGQFRLAFGDARLHPWR-GAADRPRPTALSS 153
Sbjct: 76 TAARPGTSIKTPFTPRPGTSQRARPATS-AGRPVAGSSRPRLNSSRPGSMAQARRTTRTA 134
Query: 154 RPGRERGGRSA-GKRLAAAGAVRRVRWPIAAGGRLQL 189
Sbjct: 135 RTARSLGSRSGRASRLGTASMAAFNDGKFYNLSRLNP 171
>gnl|CDD|22065 KOG4289, KOG4289, Cadherin EGF LAG seven-pass G-type receptor [Signal
transduction mechanisms]
Length = 2531
Score = 32.7 bits (74), Expect = 0.27
Identities = 27/133 (20%), Positives = 33/133 (24%), Gaps = 12/133 (9%)
Query: 445 PATPHAPMRQATAGAGRPPGELHRLRRRSAVAAGSPPPARRGTPPGIAPRSPAGPRSAGP 504
Sbjct: 45 PCPPSAPNLPLSRPRCRHAGEVSGHGRPLPDQLRCPVPGLPDSVRSHQPGCLESERLLGT 104
Query: 505 AGRRRLPPALRRLTLRAPPAMSVRCRRAAVAAIPAAACRASSPTVQGRREPRRFPRRCAR 564
Sbjct: 105 GERLCFLDAPITFPYYVCLPPRLRS----------KMRIGHSAPGKKRPEARRGARRARR 154
Query: 565 HPVRPPRSARGFP 577
Sbjct: 155 --RNPAANAVQFQ 165
Score = 29.2 bits (65), Expect = 3.4
Identities = 29/133 (21%), Positives = 38/133 (28%), Gaps = 17/133 (12%)
Query: 367 PPGAPRALPQRPRRMPGGRPN---RPGHAAVAAAERHLRGSAGVAVLLPAAHLDTTRTAP 423
Sbjct: 47 PPSAPNLPLSRPRCRHAGEVSGHGRPLPDQLRCPVPGLPDSVRSH---QPGCLESERLLG 103
Query: 424 AQRRGRGAAHRRLDLLRRLRLPATPHAPMRQATAGAGRPPGELHRLRRRSAVAAGSPPPA 483
Sbjct: 104 TGERLCFLDAPI-TFPYYVCLPPRLRSKMRIGHSAPGKKRPEARRGARR----------A 152
Query: 484 RRGTPPGIAPRSP 496
Sbjct: 153 RRRNPAANAVQFQ 165
>gnl|CDD|19770 KOG1984, KOG1984, Vesicle coat complex COPII, subunit SFB3
[Intracellular trafficking, secretion, and vesicular
transport]
Length = 1007
Score = 32.6 bits (74), Expect = 0.28
Identities = 39/175 (22%), Positives = 52/175 (29%), Gaps = 13/175 (7%)
Query: 450 APMRQATAGAGRPPGELHRLRRRSAVAAGSPPPARRGTPPGIAP---------RSPAGPR 500
Sbjct: 39 PPPMQGTGPRGPPPGAPPQQPQSGQSPMARPPQRRPGPPPGVSQPNGFAASPSSQPSYPG 98
Query: 501 SAGPAGRRRLPPALRRLTLRAPPAMSVRCRRAAVAAIPAAACRASSPTVQGRREPRRFPR 560
Sbjct: 99 RPSTPGGPQAGGSQSSFAAAGPSSGSGTGPPSGNSQGPAGPLSQGPPT-GGFPQPSAFPP 157
Query: 561 RCARHPVRPPRSARGFPVSAVRRWCRPVPVRGSVVPRRPGTASDRPAPEPSRPGV 615
Sbjct: 158 GPQG--GGPPGPAMVPPSGPLMV-SQPARASGMPPAFPPGAQMQPPPPGAPRPSG 209
Score = 30.0 bits (67), Expect = 1.8
Identities = 40/212 (18%), Positives = 56/212 (26%), Gaps = 28/212 (13%)
Query: 367 PPGAPRALPQR--------PRRMPGGRPNRPGHAAVAAAERHLRGSAGVAVLLPAAHLDT 418
Sbjct: 51 PPGAPPQQPQSGQSPMARPPQRRPGPPPGVSQPNGFAASP-----SSQPSYPGRPSTPGG 105
Query: 419 TRTAPAQRRGRGAAHRRLDLLRRLRLPATPHAPMRQATAGAGRPPGELHRLRRRSAVAAG 478
Sbjct: 106 PQAGGSQSSFAAAGPSS----------GSGTGPPSGNSQGPAGPLSQGPPTGGFPQ-PSA 154
Query: 479 SPPPARRGTPPGIAPRSPAGPRSAGPAGRRRLPPALRRLTLRAPPAMSVRCRRAAVAAIP 538
Sbjct: 155 FPPGPQGGGPPGPAMVPPSGPLMVSQPARASGMPPAFPPGAQMQPPPPGAPRPSGPGYFP 214
Query: 539 AAACRASSPTVQGRREPRRFPRRCARHPVRPP 570
Sbjct: 215 QSF----SSGAPAPGGPGSGPGPNQPPPQRLD 242
>gnl|CDD|20088 KOG2302, KOG2302, T-type voltage-gated Ca2+ channel, pore-forming
alpha1I subunit [Inorganic ion transport and metabolism,
Signal transduction mechanisms]
Length = 1956
Score = 32.0 bits (72), Expect = 0.44
Identities = 33/172 (19%), Positives = 48/172 (27%), Gaps = 15/172 (8%)
Query: 303 GEPVGGFLHPLRAQSGSRCALPAGGCVFGALGGPAGRARCAPDRACTVAGDGRRHPADRL 362
Sbjct: 896 LRSRLSLGHHLAHQHAASPHPGETISPDSSVGSYQSR-GISDYSSEYHSYDQDSHPSERS 954
Query: 363 GPDRPPGAPRALPQRPRRMPGGRPNRPGHAAVAAAERHLRGSAGVAVLLPAAHLDTTRTA 422
Sbjct: 955 SGDHPWGTSYAWTSRRSSWNQSLKHQDPS---GEYESLLSGEYGQSTSQLSAPHGSRRAA 1011
Query: 423 PAQRRGRGAAHRRLDLLRRLRLPATPHAPMRQATAGAGRPPGELHRLRRRSA 474
Sbjct: 1012 PGPR----AASRRRVFSLDVAHP-------RGSAHAAGRSASTHRDCNGRVT 1052
>gnl|CDD|17959 KOG0162, KOG0162, Myosin class I heavy chain [Cytoskeleton]
Length = 1106
Score = 31.9 bits (72), Expect = 0.54
Identities = 26/146 (17%), Positives = 43/146 (29%), Gaps = 18/146 (12%)
Query: 362 LGPDRPPGAPRALPQRPRRMPGGRPNRPGHAAVAAAERHLRGSAGVAVLLPAAHLDTTRT 421
Sbjct: 919 VGTGLPPNS-KPSRKKPRKATGYSSGRDAASTPTRRAPQNKQAYGQNGVSPAA---KGSP 974
Query: 422 APAQRRGRGAAHRRLDLLRRLRLPATPHAPMRQATAGAGRPPGELHRL-------RRRSA 474
Sbjct: 975 LPAQKPVNTYNQRP-------PPVSTSTTTSQQPSARPSSKPTVFTKVPDAGASGNGRKP 1027
Query: 475 VAAGSPPPARRGTPPGIAPRSPAGPR 500
Sbjct: 1028 SGPQRPPPPAGRPKPPPPAKPPKNPV 1053
Score = 31.1 bits (70), Expect = 0.82
Identities = 25/133 (18%), Positives = 35/133 (26%), Gaps = 13/133 (9%)
Query: 444 LPATPHAPMRQATAGAGRPPGELHRLRRRSAVAAGSPPPA--RRGTPPGIAPRSPA-GPR 500
Sbjct: 923 LPPNSKPSRKKPRKATGYSSG--RDAASTPTRRAPQNKQAYGQNGVSPA-AKGSPLPAQK 979
Query: 501 SAGPAGRRRLPPALRRLTLRAPPAMSVRCRRAAVAAIPA-AACRASSPTVQGRREPRRFP 559
Sbjct: 980 PVNTYNQRPPPVSTSTTTSQQPSARPSSKPTVFTKVPDAGASGNGRKPSGPQRPPPP--- 1036
Query: 560 RRCARHPVRPPRS 572
Sbjct: 1037 ---AGRPKPPPPA 1046
Score = 30.7 bits (69), Expect = 1.2
Identities = 31/137 (22%), Positives = 38/137 (27%), Gaps = 23/137 (16%)
Query: 484 RRGTPPGIAPRSPAGPRSAGPAGRRRLPPALRRLTLRAPPAMSVRCRRAAVAAIPAAACR 543
Sbjct: 920 GTGLPPNSKPSRK-KPRKATGYSSGR--DAASTPTRRAPQ------------NKQAYGQN 964
Query: 544 ASSPTVQGRREPRRFPRRCARHPVRPPRS-------ARGFPVSAVRRWCRPVPVRGSVVP 596
Sbjct: 965 GVSPAAKGSPLPAQKPVNTYNQRPPPVSTSTTTSQQPSARPSSKPTVFTK-VPDAGASGN 1023
Query: 597 RRPGTASDRPAPEPSRP 613
Sbjct: 1024 GRKPSGPQRPPPPAGRP 1040
>gnl|CDD|22494 KOG4721, KOG4721, Serine/threonine protein kinase, contains leucine
zipper domain [Signal transduction mechanisms]
Length = 904
Score = 30.1 bits (67), Expect = 1.7
Identities = 47/252 (18%), Positives = 67/252 (26%), Gaps = 34/252 (13%)
Query: 278 PGRRVRCQPGGPRPGSVEPARALAVGEPVGGFLHPLRAQSGSRCALP------------- 324
Sbjct: 515 PKLDSNLSSASGLPSS--PKAPPSPSRSRGKTRHR-RANAKGSCGILDLPAIRTAVPPHE 571
Query: 325 --AGGCVFGALGGPAGRARCAPDRACTVAGDGRRHPADRLGPDRPPGAPRALPQRPRRMP 382
Sbjct: 572 PGGRGSPGGLSGGPSDSGMWSAWEACPPALRGLHQPLLSQTLLR---------QLPGSSP 622
Query: 383 GGRPNRPGHAAVAAAERHLRGSAGVAVLLPAAHLDTTRTAPAQRRGRGAAHRRLDLLRR- 441
Sbjct: 623 DLLS-----AALASRGRSGTGSAGDPGAPPPARGDTPPSEGSAPISCSSPDSSSPDGAKS 677
Query: 442 -LRLPATPHAPMRQATAGAGRPPGELHRLRRRSAVAAGSPPPARRGTPPGIAPRSPAGPR 500
Sbjct: 678 EPPPPVGEQLEDGEGVGLLGTGRANEGAVPMTSSGRSGSRAPGSSHLEPAESFVAPLLPR 737
Query: 501 SAGPAGRRRLPP 512
Sbjct: 738 AAVTLSKKRNLG 749
>gnl|CDD|19710 KOG1924, KOG1924, RhoA GTPase effector DIA/Diaphanous [Signal
transduction mechanisms, Cytoskeleton]
Length = 1102
Score = 28.8 bits (64), Expect = 4.3
Identities = 32/121 (26%), Positives = 35/121 (28%), Gaps = 11/121 (9%)
Query: 448 PHAPMRQATAGAGRPPGELHRLRRRSAVAAGSPPPARRGTPPGIAPRSPAGPRSAGPAGR 507
Sbjct: 528 PPPPPLPPTGGTGPPP-----PPPPPPLPGGAGPPPPPPPLPGIAGGPPPPPPPPGGGGP 582
Query: 508 RRLPPALRRLTLRAPPAMSVRCRRAAVAAIPAAACRASSPTVQGRR------EPRRFPRR 561
Sbjct: 583 PPPPPPGGFLGGPPPPPPPGMFPMAPVLPFGLKPKKVYKPEVPMRRFNWSKIVPRDLSEN 642
Query: 562 C 562
Sbjct: 643 C 643
>gnl|CDD|26436 pfam05790, CD2, T-cell surface antigen CD2 protein. This family
consists of several mammalian T-cell surface antigen CD2
proteins as well as homologous African swine fever virus
sequences. CD2 mediates T cell adhesion via its
ectodomain and signal transduction utilising its
117-amino acid cytoplasmic tail. The structural and
functional similarities of the African swine fever virus
(ASFV) LMW8-DR to CD2, a protein that is involved in
cell-cell adhesion and immune response modulation,
suggest a possible role in the pathogenesis of ASFV
infection
Length = 356
Score = 28.5 bits (63), Expect = 5.0
Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 7/62 (11%)
Query: 444 LPATPHAPMRQATAGAGRPPGELHRLR----RRSAVAAGSPPPARRGTP---PGIAPRSP 496
Sbjct: 290 SQAPPPPPGHRPQAPGHRPLPPGHRVQHHQQKKCPPPSGTQVHQQKGPPLPRPRVQPKPP 349
Query: 497 AG 498
Sbjct: 350 PG 351
>gnl|CDD|18846 KOG1053, KOG1053, Glutamate-gated NMDA-type ion channel receptor
subunit GRIN2A and related subunits [Inorganic ion
transport and metabolism, Amino acid transport and
metabolism, Signal transduction mechanisms]
Length = 1258
Score = 28.5 bits (63), Expect = 5.4
Identities = 28/165 (16%), Positives = 46/165 (27%), Gaps = 18/165 (10%)
Query: 479 SPPPARRGTPPGIAPRSPAGPRSAGPAGRRRLPPALRRLTLRAPPAMSVRCRRAAVAAIP 538
Sbjct: 890 SPPTQRTNSPSNVAPL----LRASANLSHVNRSQAAGDFIRRISIHQDIPLRR-----LE 940
Query: 539 AAACRASSPTVQG----RREPRRFPRRCARHPVRPPR----SARGFPVSAVRRWCRPVPV 590
Sbjct: 941 LSLLRSTNGEEDGLGDSRNEVRAEPSNLQKQPLSIPQEQQPHLEPYSRTSATSESPPAEP 1000
Query: 591 RGSVVPRRPGTASDRPAP-EPSRPGVVAGRRAAGCAGRPRRAASA 634
Sbjct: 1001 PAGAFPRFPSPPGPPASAGPPLCRLSFKSERPPAPARWPVSEGAG 1045
>gnl|CDD|22348 KOG4573, KOG4573, Phosphoprotein involved in cytoplasm to vacuole
targeting and autophagy [Intracellular trafficking,
secretion, and vesicular transport]
Length = 705
Score = 28.6 bits (63), Expect = 5.5
Identities = 25/142 (17%), Positives = 45/142 (31%), Gaps = 11/142 (7%)
Query: 437 DLLRRLRLPATPHAPMRQATAGAGRPPGELHRLRRRSAVAAGSPPPARRGTPPGIAPRSP 496
Sbjct: 300 DPQRQFQSQ-TQSLRQISDRRSLGLPPLTRANFFRPHSWQSKFYRISAPVQPPKVS-SSP 357
Query: 497 AGPRSAGPA-----GRRRLPPALRRLTLRAPPAMSVRCRRAAVAAIPAAACRASSPTVQG 551
Sbjct: 358 SQSASRSPTNSDFFNQPSHAPSMSHNLGPPMNIESVGSTSKYPSSFPNIRRHSSVKTTES 417
Query: 552 RREPRRFPRRCARHPVRPPRSA 573
Sbjct: 418 PRKVSKPVKS----PLQPPESA 435
>gnl|CDD|19908 KOG2122, KOG2122, Beta-catenin-binding protein APC, contains ARM
repeats [Signal transduction mechanisms, Cytoskeleton]
Length = 2195
Score = 28.2 bits (62), Expect = 6.6
Identities = 47/217 (21%), Positives = 67/217 (30%), Gaps = 8/217 (3%)
Query: 358 PADRLGPDRPPGAPRALPQRP---RRMPGGRPNRPGHAAVAAAERHLRGSAGVAVLLPAA 414
Sbjct: 1836 PARRGPPPLARAVPEPGPRGRAGNEAGPGARGGRLGLVRVASALSSGSESSDRSGF--RR 1893
Query: 415 HLDTTRTAPAQRRGRGAAHRRLDLLRRLRLPATPHAPMRQATAGAGRPPGELHRLRRRSA 474
Sbjct: 1894 QLTFIKEALRRRRSELSSAESAASSPQGASPRRGRPALPAVFPCSSDCEELRASSRQAPA 1953
Query: 475 VAAGSPPPARRGTPPGIAPRSPAGPRSAGPAGRRRLPPALRRLTLRAPPAMSVRCRRAAV 534
Sbjct: 1954 PARQRPPAARPSPGERPARRTTSESPSRLPV---RAPAARPETVKRYASLPHISVARRPD 2010
Query: 535 AAIPAAACRASSPTVQGRREPRRFPRRCARHPVRPPR 571
Sbjct: 2011 GAVPALPASADAARRSSDGEPRPVPRQAAPNTTRRIK 2047
>gnl|CDD|19709 KOG1923, KOG1923, Rac1 GTPase effector FRL [Signal transduction
mechanisms, Cytoskeleton]
Length = 830
Score = 28.0 bits (62), Expect = 6.7
Identities = 27/126 (21%), Positives = 39/126 (30%), Gaps = 6/126 (4%)
Query: 423 PAQRRGRGAAHRRLDLLRRLRLPATPHAPMRQATAGAGRPPGELHRLRRRSAVAAGSPPP 482
Sbjct: 248 QLASSAKGQGIRAQILALGSLASA---CDSQPGSGSGPPPPAPLPHTAQSDA--APSPLR 302
Query: 483 ARRGTPPGIAPRSPAGPRSAGPAGRRRLPPALRRLTLRAPPAMSVRCRRAAVAAIPAAAC 542
Sbjct: 303 LRCSPPPP-PPFPPVGPLNSNLSSGAPQPPGVPFLLTFPESPVPPPQRLMIPAELFAATI 361
Query: 543 RASSPT 548
Sbjct: 362 KKPTPT 367
>gnl|CDD|21673 KOG3895, KOG3895, Synaptic vesicle protein Synapsin [Signal
transduction mechanisms, Intracellular trafficking,
secretion, and vesicular transport]
Length = 488
Score = 28.1 bits (62), Expect = 7.6
Identities = 17/66 (25%), Positives = 18/66 (27%), Gaps = 2/66 (3%)
Query: 445 PATPHAPMRQATAGAGRPP--GELHRLRRRSAVAAGSPPPARRGTPPGIAPRSPAGPRSA 502
Sbjct: 403 PARPTTSQVPSGGGLPGPAQASPTRRLPPRPPPQGGPPPRGHMSDPVGSRHLDHDGPPQI 462
Query: 503 GPAGRR 508
Sbjct: 463 PRTGSR 468
>gnl|CDD|18187 KOG0391, KOG0391, SNF2 family DNA-dependent ATPase [General function
prediction only]
Length = 1958
Score = 27.8 bits (61), Expect = 7.8
Identities = 25/160 (15%), Positives = 43/160 (26%), Gaps = 22/160 (13%)
Query: 454 QATAGAGRPPGELHRLRRRSAVAAGSPPPARRGTPPGIAPRSPAGPRSAGPAGRRRLPPA 513
Sbjct: 1816 AGTGPGGSAPAQVVHTQPPKPISPAPFPPLR----QQQAQQQPT----ATTRQVQVPQIQ 1867
Query: 514 LRRLTLRAPPAMSVRCRRAAVAAIPAAACRASSPTVQGRREPRRFPRRCARHPVRPPRSA 573
Sbjct: 1868 GRAQSPAGKLTPTHLIKMQKQKPQMPPPQPAAQPQPQGPQPP---------QQPSPQ--- 1915
Query: 574 RGFPVSAVRRWCRPVPVRGSVVPRRPGTASDRPAPEPSRP 613
Sbjct: 1916 -LTTVTAPRRG-ALGVARSTGDPTSELQSQPQPQPQAPQP 1953
>gnl|CDD|21295 KOG3511, KOG3511, Sortilin and related receptors [General function
prediction only]
Length = 720
Score = 27.6 bits (61), Expect = 8.9
Identities = 12/47 (25%), Positives = 13/47 (27%), Gaps = 2/47 (4%)
Query: 358 PADRLGPDRPPGAPRALPQRPR-RMPGGRPNRPGHAAVAAAERHLRG 403
Sbjct: 16 SQDRLGTQRSSGASWPSNDDSGFLVAQLPP-RERGLWAREIARGARG 61
>gnl|CDD|23866 pfam05642, Sporozoite_P67, Sporozoite P67 surface antigen. This
family consists of several Theileria P67 surface
antigens. A stage specific surface antigen of Theileria
parva, p67, is the basis for the development of an
anti-sporozoite vaccine for the control of East Coast
fever (ECF) in cattle. The antigen has been shown to
contain five distinct linear peptide sequences recognised
by sporozoite-neutralising murine monoclonal antibodies
Length = 729
Score = 27.8 bits (61), Expect = 9.0
Identities = 40/210 (19%), Positives = 54/210 (25%), Gaps = 28/210 (13%)
Query: 184 GGRLQLRAQPAGQAPPTALAGPAAWLAGRCHAGLGATRDLRLGSPCAGLIECTAGLESAG 243
Sbjct: 135 DGKGSKKTQPPVSTSSGSTTSQTDLSTAQSQNGLG---------SSGSHDQETAQQDPAV 185
Query: 244 LRFPIDPRPATCGGGLR------HARAGHQPVDRPRPGRAPGRRVRCQPGGPRPGSVEPA 297
Sbjct: 186 SQSGVVGVPGVGVGGVGVPGVGVPGAGGLPGVGVGRAGVLPGVGVGGLGGVPGVGIEGDE 245
Query: 298 RALAVGEPVGGFLHP---LRAQSGSRCALPAGGCVFGALG--GPAGRARCAPDRACTVAG 352
Sbjct: 246 VDDAESPGVGIGGVRGTSREGQGQHHQVRDGDGRVIEKPGLPGDPAASTSTTTPSSSTST 305
Query: 353 DGR--------RHPADRLGPDRPPGAPRAL 374
Sbjct: 306 TTPSSSSNAVTRHTDSISGPIPSPGAPRAI 335
>gnl|CDD|19942 KOG2156, KOG2156, Tubulin-tyrosine ligase-related protein
[Posttranslational modification, protein turnover,
chaperones]
Length = 662
Score = 27.7 bits (61), Expect = 9.5
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 567 VRPPRSARGFPVSAVRRW 584
Sbjct: 310 VKPPASARGIGIRVINKW 327
Lambda K H
0.321 0.139 0.445
Gapped
Lambda K H
0.267 0.0492 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 1100, Extension: 100
Number of Hits to DB: 11,794,759
Number of Sequences: 0
Number of extensions: 1259916
Number of successful extensions: 1240
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of query: 0
length of database: 5,506,404
effective HSP length: 100
effective length of query: -100
effective length of database: 3,702,504
effective search space: -370250400
effective search space used: 1977137136
T: 11
A: 40
X1: 1600 (741.8 bits)
X2: 3800 (1463.8 bits)
X3: 6400 (2465.3 bits)
S1: 4100 (1903.8 bits)
S2: 53 (24.8 bits)