RPS-BLAST 2.2.6 [Apr-09-2003]

Database: All 
           18,039 sequences; 5,506,404 total letters



Query= 5251 (88 letters)

Distribution of 2 Blast Hits on the Query Sequence




                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|CDD|22058  KOG4282, KOG4282, Transcription factor GT-2 a...    24   4.4   
gnl|CDD|16383  pfam05088, Bac_GDH, Bacterial NAD-glutamate d...    24   7.3   

>gnl|CDD|22058 KOG4282, KOG4282, Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain [Transcription] Length = 345 Score = 24.4 bits (52), Expect = 4.4 Identities = 6/15 (40%), Positives = 11/15 (73%)
Query:  4    QRQYPRTPLKCRIRI  18
Sbjct:  95   ELGYPRSPKQCKAKI  109


>gnl|CDD|16383 pfam05088, Bac_GDH, Bacterial NAD-glutamate dehydrogenase. This family consists of several bacterial proteins which are closely related to NAD-glutamate dehydrogenase found in Streptomyces clavuligerus. Glutamate dehydrogenases (GDHs) are a broadly distributed group of enzymes that catalyse the reversible oxidative deamination of glutamate to ketoglutarate and ammonia Length = 1528 Score = 23.7 bits (51), Expect = 7.3 Identities = 10/28 (35%), Positives = 14/28 (50%)
Query:  57    QVQDLPIDAPILQMEVVRVDAEGVGLRF  84
Sbjct:  702   AIPELPAPRPKREIFVYSPRVEGVHLRF  729

Lambda     K      H
   0.321    0.139    0.404 

Gapped
Lambda     K      H
   0.267   0.0476    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 1100, Extension: 100
Number of Hits to DB: 1,451,630
Number of Sequences: 0
Number of extensions: 110770
Number of successful extensions: 31
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of query: 0
length of database: 5,506,404
effective HSP length: 64
effective length of query: -64
effective length of database: 4,351,908
effective search space: -278522112
effective search space used: 104445792
T: 11
A: 40
X1: 1600 (740.2 bits)
X2: 3800 (1463.8 bits)
X3: 6400 (2465.3 bits)
S1: 4100 (1899.5 bits)
S2: 59 (27.1 bits)