Score E
Sequences producing significant alignments: (bits) Value
gnl|CDD|11449 COG1738, COG1738, Uncharacterized conserved p... 162 5e-41
gnl|CDD|17175 pfam02592, DUF165, Uncharacterized ACR, YhhQ ... 129 5e-31
gnl|CDD|20387 KOG2601, KOG2601, Iron transporter [Inorganic... 28 1.2
gnl|CDD|24957 pfam06084, Cytomega_TRL10, Cytomegalovirus TR... 27 3.7
>gnl|CDD|11449 COG1738, COG1738, Uncharacterized conserved protein [Function
unknown]
Length = 233
Score = 162 bits (412), Expect = 5e-41
Identities = 91/221 (41%), Positives = 127/221 (57%), Gaps = 7/221 (3%)
Query: 1 MSASSPAAWRGTLAGLIAFHIVIIIASNYLVQLPITLFGWHTTWGAFSFPFIFLATDLTV 60
Sbjct: 14 FVLFGLAYRFFGLIGLAAWFALLIIISNILVQKPVEIFGFVLTWGAFLYPFIFLATDLTV 73
Query: 61 RLLGKGPARLVIARVMIPALIASYVVSVLFQ---EAAFRGFSALLEFNTFVARISLASFL 117
Sbjct: 74 EIYGKKEARKAVFLGFFSALVFSILTQIALHFPPSGSDEAQEALAALFSFVPRIALASLL 133
Query: 118 AYVLGQILDIQVFDRLRR---SRHWWTAPVASTILGNLLDTFTFFFVAFWRSDNPFMAQH 174
Sbjct: 134 AYIVSQLLDVWVFNRLKRRTGGKSLWLRPNASTLVSQLIDTVIFFFIAFYVSPDGFMAE- 192
Query: 175 WVEIATVDYGVKLSISLLLFVPLYGMLLNGILKMLPGRPQS 215
Sbjct: 193 WIEIIFGDYLVKLLIAVLDTPFVYGAVLWVLRKKLPEVTKI 233
>gnl|CDD|17175 pfam02592, DUF165, Uncharacterized ACR, YhhQ family COG1738
Length = 155
Score = 129 bits (326), Expect = 5e-31
Identities = 65/157 (41%), Positives = 89/157 (56%), Gaps = 8/157 (5%)
Query: 37 LFGWHTTWGAFSFPFIFLATDLTVRLLGKGPARLVIARVMIPALIASYVVSVLFQ---EA 93
Sbjct: 1 IFGFHATLGNVLFPFIFLATDLLVEIYGKKEARKAVFLGFLSQLIFLILMQIALHFPPSP 60
Query: 94 AFRGFSALLEFNTFVARISLASFLAYVLGQILDIQVFDRLRR---SRHWWTAPVASTILG 150
Sbjct: 61 LDQGQEALKALFSPVPRIALASLIAYIISQILDVLLFNFLKRRFPGKHLWLRPNGSTLLS 120
Query: 151 NLLDTFTFFFVAFWRSDNPFMAQHWVEIATVDYGVKL 187
Sbjct: 121 QLIDTFIFSFIAFYGS--VFPAAHWLEIMLFDYLFKL 155
>gnl|CDD|20387 KOG2601, KOG2601, Iron transporter [Inorganic ion transport and
metabolism]
Length = 503
Score = 28.4 bits (63), Expect = 1.2
Identities = 24/126 (19%), Positives = 38/126 (30%)
Query: 42 TTWGAFSFPFIFLATDLTVRLLGKGPARLVIARVMIPALIASYVVSVLFQEAAFRGFSAL 101
Sbjct: 254 LRDCQSSFPVAGTHSEGFMTNLASRYGILVILPRFSISSFRSAWRVYFNQEVVLPGVSLA 313
Query: 102 LEFNTFVARISLASFLAYVLGQILDIQVFDRLRRSRHWWTAPVASTILGNLLDTFTFFFV 161
Sbjct: 314 LLFFTVLGFGVLMTATLFWPGSPMYIIGIGRGISAGTGLAATVHYPLMQSRTNLLRTGLW 373
Query: 162 AFWRSD 167
Sbjct: 374 SFWSQD 379
>gnl|CDD|24957 pfam06084, Cytomega_TRL10, Cytomegalovirus TRL10 protein. This family
consists of several Cytomegalovirus TRL10 proteins. TRL10
represents a structural component of the virus particle
and like the other HCMV envelope glycoproteins, is
present in a disulfide-linked complex
Length = 169
Score = 27.0 bits (59), Expect = 3.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 34 PITLFGWHTTWGAFSF 49
Sbjct: 70 PITMLGAYSAWGAGSF 85
Lambda K H
0.331 0.143 0.448
Gapped
Lambda K H
0.267 0.0514 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 1100, Extension: 100
Number of Hits to DB: 3,673,191
Number of Sequences: 0
Number of extensions: 351545
Number of successful extensions: 256
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 248
length of query: 0
length of database: 5,506,404
effective HSP length: 90
effective length of query: -90
effective length of database: 3,882,894
effective search space: -349460460
effective search space used: 493127538
T: 11
A: 40
X1: 1500 (717.1 bits)
X2: 3800 (1463.8 bits)
X3: 6400 (2465.3 bits)
S1: 4000 (1915.1 bits)
S2: 58 (26.6 bits)