Score E
Sequences producing significant alignments: (bits) Value
gnl|CDD|11895 COG2187, COG2187, Uncharacterized protein con... 29 2.2
gnl|CDD|13066 COG3746, OprP, Phosphate-selective porin [Ino... 28 4.8
>gnl|CDD|11895 COG2187, COG2187, Uncharacterized protein conserved in bacteria
[Function unknown]
Length = 337
Score = 29.5 bits (66), Expect = 2.2
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 328 AVDKHLARKGALIFARKTDEGGCVECHG-IRIKDLVLWD 365
Sbjct: 188 MTEEFLERHGPL-FDRRIAEGFIRECHGDLHLRNICLWD 225
>gnl|CDD|13066 COG3746, OprP, Phosphate-selective porin [Inorganic ion transport and
metabolism]
Length = 426
Score = 28.4 bits (63), Expect = 4.8
Identities = 33/178 (18%), Positives = 45/178 (25%), Gaps = 31/178 (17%)
Query: 150 GPLTSDDAAFDAFA-KQILGANPPPGARDALLAAVKE----------------WYEPYHT 192
Sbjct: 57 GRFQADYRRFDGDYRINGNTADAAYFRRARLEGGGTAYRDYKYQGNFDLSANVGYDLEGE 116
Query: 193 LIERALPKDTWGPARLDAVSMI----FNRLTGLDIGTAPPYLIPDNIKAADAPVRYPFLW 248
Sbjct: 117 FDDAAVTYTGFNPVTLRLGRFKTDFGLEKLTSSKWGTFMERAAFTYAIADE--RRTGVSW 174
Query: 249 NAARQNKTQWPG-------FAANGNDLLGLARNVGEVYGVFATFHPQKSKFHLLGMDY 299
Sbjct: 175 QGERGNSVLQGGAYLSDSVSLSNSNDGDGDSVKGLNGRGVWAPKHETGDVLH-LGVSY 231
Lambda K H
0.319 0.136 0.412
Gapped
Lambda K H
0.267 0.0449 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 1100, Extension: 100
Number of Hits to DB: 9,605,383
Number of Sequences: 0
Number of extensions: 952806
Number of successful extensions: 287
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 287
length of query: 0
length of database: 5,506,404
effective HSP length: 99
effective length of query: -99
effective length of database: 3,720,543
effective search space: -368333757
effective search space used: 1744934667
T: 11
A: 40
X1: 1600 (735.2 bits)
X2: 3800 (1463.8 bits)
X3: 6400 (2465.3 bits)
S1: 4100 (1886.9 bits)
S2: 59 (27.2 bits)