BLAST Search Results

BLASTN 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: pa14 
           1 sequences; 6,534,396 total letters



Query= 
         (353 letters)

Distribution of 97 Blast Hits on the Query Sequence



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GCTS_68                                                           430   e-121 

>GCTS_68 
          Length = 6534396

 Score =  430 bits (217), Expect = e-121
 Identities = 238/245 (97%)
 Strand = Plus / Minus

                                                                         
Query: 109   tacggcctcgcgccgctatcggtggcgcccgggcgacagcgccagggtctcggttcgcag 168
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56794 tacggcctcgcgccgctatcggtggcgcccgggcgacagcgccagggtctcggttcgcag 56735

                                                                         
Query: 169   ttggtccggcgcctgctcaccgagttgcgactgctgcccgcgggtggctgcgtggtactg 228
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56734 ttggtccggcgcctgctcaccgagttgcgactgctgcccgcgggtggctgcgtggtactg 56675

                                                                         
Query: 229   ggcgaaccgacctactactcgcgcttcggctttcgggtggaaagcggcctggcgttgccc 288
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56674 ggcgaaccgacctactactcgcgcttcggctttcgggtggaaagcggcctggcgttgccc 56615

                                                                         
Query: 289   ggcgttcccgccgaatacttccaggcaccatccttcgccggccggatgacgcgaggaata 348
             ||||||||||||||||||||||||||||  ||||||  ||| || ||| |||||||||||
Sbjct: 56614 ggcgttcccgccgaatacttccaggcacagtccttcagcgggcgcatggcgcgaggaata 56555

                  
Query: 349   gtggc 353
             |||||
Sbjct: 56554 gtggc 56550




 Score = 34.2 bits (17), Expect = 0.11
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 264     ggtggaaagcggcctgg 280
               |||||||||||||||||
Sbjct: 1946262 ggtggaaagcggcctgg 1946246




 Score = 32.2 bits (16), Expect = 0.44
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                              
Query: 177    gcgcctgctcaccgag 192
              ||||||||||||||||
Sbjct: 661418 gcgcctgctcaccgag 661403




 Score = 32.2 bits (16), Expect = 0.44
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 165     gcagttggtccggcgcctgc 184
               |||||||| |||||||||||
Sbjct: 1657150 gcagttggaccggcgcctgc 1657169




 Score = 32.2 bits (16), Expect = 0.44
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 264     ggtggaaagcggcctg 279
               ||||||||||||||||
Sbjct: 2180777 ggtggaaagcggcctg 2180762




 Score = 32.2 bits (16), Expect = 0.44
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 264     ggtggaaagcggcctg 279
               ||||||||||||||||
Sbjct: 3152952 ggtggaaagcggcctg 3152937




 Score = 32.2 bits (16), Expect = 0.44
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 143     gacagcgccagggtct 158
               ||||||||||||||||
Sbjct: 4380916 gacagcgccagggtct 4380931




 Score = 32.2 bits (16), Expect = 0.44
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 264     ggtggaaagcggcctg 279
               ||||||||||||||||
Sbjct: 4818885 ggtggaaagcggcctg 4818900




 Score = 32.2 bits (16), Expect = 0.44
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 221     tggtactgggcgaaccgacc 240
               |||||| |||||||||||||
Sbjct: 5095571 tggtacagggcgaaccgacc 5095590




 Score = 32.2 bits (16), Expect = 0.44
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 249     gcgcttcggctttcgg 264
               ||||||||||||||||
Sbjct: 5174332 gcgcttcggctttcgg 5174317




 Score = 32.2 bits (16), Expect = 0.44
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 218     gcgtggtactgggcga 233
               ||||||||||||||||
Sbjct: 6354576 gcgtggtactgggcga 6354561




 Score = 32.2 bits (16), Expect = 0.44
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 175     cggcgcctgctcaccg 190
               ||||||||||||||||
Sbjct: 6398811 cggcgcctgctcaccg 6398796




 Score = 30.2 bits (15), Expect = 1.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 177    gcgcctgctcaccga 191
              |||||||||||||||
Sbjct: 569195 gcgcctgctcaccga 569181




 Score = 30.2 bits (15), Expect = 1.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 222    ggtactgggcgaacc 236
              |||||||||||||||
Sbjct: 702194 ggtactgggcgaacc 702180




 Score = 30.2 bits (15), Expect = 1.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 278     tggcgttgcccggcg 292
               |||||||||||||||
Sbjct: 1047604 tggcgttgcccggcg 1047590




 Score = 30.2 bits (15), Expect = 1.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 268     gaaagcggcctggcg 282
               |||||||||||||||
Sbjct: 1618986 gaaagcggcctggcg 1618972




 Score = 30.2 bits (15), Expect = 1.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 272     gcggcctggcgttgc 286
               |||||||||||||||
Sbjct: 2058059 gcggcctggcgttgc 2058045




 Score = 30.2 bits (15), Expect = 1.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 272     gcggcctggcgttgc 286
               |||||||||||||||
Sbjct: 2299632 gcggcctggcgttgc 2299618




 Score = 30.2 bits (15), Expect = 1.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 172     gtccggcgcctgctc 186
               |||||||||||||||
Sbjct: 2561031 gtccggcgcctgctc 2561045




 Score = 30.2 bits (15), Expect = 1.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 271     agcggcctggcgttg 285
               |||||||||||||||
Sbjct: 3043371 agcggcctggcgttg 3043385




 Score = 30.2 bits (15), Expect = 1.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 177     gcgcctgctcaccga 191
               |||||||||||||||
Sbjct: 3294258 gcgcctgctcaccga 3294272




 Score = 30.2 bits (15), Expect = 1.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 246     ctcgcgcttcggctt 260
               |||||||||||||||
Sbjct: 3428004 ctcgcgcttcggctt 3428018




 Score = 30.2 bits (15), Expect = 1.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 141     gcgacagcgccaggg 155
               |||||||||||||||
Sbjct: 3437616 gcgacagcgccaggg 3437602




 Score = 30.2 bits (15), Expect = 1.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 287     ccggcgttcccgccg 301
               |||||||||||||||
Sbjct: 3732342 ccggcgttcccgccg 3732328




 Score = 30.2 bits (15), Expect = 1.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 128     cggtggcgcccgggc 142
               |||||||||||||||
Sbjct: 4083727 cggtggcgcccgggc 4083713




 Score = 30.2 bits (15), Expect = 1.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 277     ctggcgttgcccggc 291
               |||||||||||||||
Sbjct: 4099995 ctggcgttgcccggc 4099981




 Score = 30.2 bits (15), Expect = 1.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 289     ggcgttcccgccgaa 303
               |||||||||||||||
Sbjct: 4101919 ggcgttcccgccgaa 4101933




 Score = 30.2 bits (15), Expect = 1.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 182     tgctcaccgagttgc 196
               |||||||||||||||
Sbjct: 4255757 tgctcaccgagttgc 4255771




 Score = 30.2 bits (15), Expect = 1.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 178     cgcctgctcaccgag 192
               |||||||||||||||
Sbjct: 4284694 cgcctgctcaccgag 4284708




 Score = 30.2 bits (15), Expect = 1.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 321     cttcgccggccggat 335
               |||||||||||||||
Sbjct: 4371096 cttcgccggccggat 4371110




 Score = 30.2 bits (15), Expect = 1.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 272     gcggcctggcgttgc 286
               |||||||||||||||
Sbjct: 4721481 gcggcctggcgttgc 4721467




 Score = 30.2 bits (15), Expect = 1.8
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 264     ggtggaaagcggcctggcg 282
               |||||| ||||||||||||
Sbjct: 4870974 ggtggatagcggcctggcg 4870956




 Score = 30.2 bits (15), Expect = 1.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 145     cagcgccagggtctc 159
               |||||||||||||||
Sbjct: 5191597 cagcgccagggtctc 5191583




 Score = 30.2 bits (15), Expect = 1.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 281     cgttgcccggcgttc 295
               |||||||||||||||
Sbjct: 5220300 cgttgcccggcgttc 5220314




 Score = 30.2 bits (15), Expect = 1.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 321     cttcgccggccggat 335
               |||||||||||||||
Sbjct: 5232080 cttcgccggccggat 5232066




 Score = 30.2 bits (15), Expect = 1.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 141     gcgacagcgccaggg 155
               |||||||||||||||
Sbjct: 5259011 gcgacagcgccaggg 5258997




 Score = 30.2 bits (15), Expect = 1.8
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 204     gcccgcgggtggctgcgtg 222
               ||||||||||||| |||||
Sbjct: 5723926 gcccgcgggtggcggcgtg 5723908




 Score = 30.2 bits (15), Expect = 1.8
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 271     agcggcctggcgttgcccg 289
               |||||| ||||||||||||
Sbjct: 5875699 agcggcgtggcgttgcccg 5875681




 Score = 30.2 bits (15), Expect = 1.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 115     ctcgcgccgctatcg 129
               |||||||||||||||
Sbjct: 6056565 ctcgcgccgctatcg 6056579




 Score = 30.2 bits (15), Expect = 1.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 179     gcctgctcaccgagt 193
               |||||||||||||||
Sbjct: 6070073 gcctgctcaccgagt 6070059




 Score = 30.2 bits (15), Expect = 1.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 145     cagcgccagggtctc 159
               |||||||||||||||
Sbjct: 6386281 cagcgccagggtctc 6386295




 Score = 30.2 bits (15), Expect = 1.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 146     agcgccagggtctcg 160
               |||||||||||||||
Sbjct: 6405775 agcgccagggtctcg 6405761




 Score = 30.2 bits (15), Expect = 1.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 136     cccgggcgacagcgc 150
               |||||||||||||||
Sbjct: 6473050 cccgggcgacagcgc 6473036




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                
Query: 120    gccgctatcggtggcgcc 137
              ||||||||||| ||||||
Sbjct: 158383 gccgctatcggcggcgcc 158366




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 218    gcgtggtactgggc 231
              ||||||||||||||
Sbjct: 450413 gcgtggtactgggc 450426




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 17/18 (94%)
 Strand = Plus / Plus

                                
Query: 272    gcggcctggcgttgcccg 289
              ||||| ||||||||||||
Sbjct: 453878 gcggcgtggcgttgcccg 453895




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 140    ggcgacagcgccag 153
              ||||||||||||||
Sbjct: 457893 ggcgacagcgccag 457906




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 147    gcgccagggtctcg 160
              ||||||||||||||
Sbjct: 459972 gcgccagggtctcg 459959




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 273    cggcctggcgttgc 286
              ||||||||||||||
Sbjct: 460262 cggcctggcgttgc 460275




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 243    ctactcgcgcttcg 256
              ||||||||||||||
Sbjct: 702025 ctactcgcgcttcg 702038




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 158    tcggttcgcagttg 171
              ||||||||||||||
Sbjct: 975304 tcggttcgcagttg 975291




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 127     tcggtggcgcccgg 140
               ||||||||||||||
Sbjct: 1066598 tcggtggcgcccgg 1066611




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 141     gcgacagcgccagg 154
               ||||||||||||||
Sbjct: 1166735 gcgacagcgccagg 1166722




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 145     cagcgccagggtct 158
               ||||||||||||||
Sbjct: 1329882 cagcgccagggtct 1329869




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 323     tcgccggccggatg 336
               ||||||||||||||
Sbjct: 1331086 tcgccggccggatg 1331073




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 173     tccggcgcctgctc 186
               ||||||||||||||
Sbjct: 1332777 tccggcgcctgctc 1332764




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 272     gcggcctggcgttg 285
               ||||||||||||||
Sbjct: 1439566 gcggcctggcgttg 1439579




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 278     tggcgttgcccggc 291
               ||||||||||||||
Sbjct: 1601027 tggcgttgcccggc 1601040




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 113     gcctcgcgccgcta 126
               ||||||||||||||
Sbjct: 1622515 gcctcgcgccgcta 1622528




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 145     cagcgccagggtct 158
               ||||||||||||||
Sbjct: 1830132 cagcgccagggtct 1830119




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 178     cgcctgctcaccga 191
               ||||||||||||||
Sbjct: 1847072 cgcctgctcaccga 1847059




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 273     cggcctggcgttgc 286
               ||||||||||||||
Sbjct: 1887464 cggcctggcgttgc 1887477




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 191     agttgcgactgctg 204
               ||||||||||||||
Sbjct: 2173800 agttgcgactgctg 2173813




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 293     ttcccgccgaatac 306
               ||||||||||||||
Sbjct: 2260881 ttcccgccgaatac 2260894




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 179     gcctgctcaccgag 192
               ||||||||||||||
Sbjct: 2334940 gcctgctcaccgag 2334927




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 278     tggcgttgcccggc 291
               ||||||||||||||
Sbjct: 2393263 tggcgttgcccggc 2393250




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 297     cgccgaatacttcc 310
               ||||||||||||||
Sbjct: 2419800 cgccgaatacttcc 2419813




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 272     gcggcctggcgttg 285
               ||||||||||||||
Sbjct: 2516522 gcggcctggcgttg 2516509




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 249     gcgcttcggctttc 262
               ||||||||||||||
Sbjct: 2587796 gcgcttcggctttc 2587809




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 111     cggcctcgcgccgc 124
               ||||||||||||||
Sbjct: 2629362 cggcctcgcgccgc 2629349




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 141     gcgacagcgccagg 154
               ||||||||||||||
Sbjct: 3073960 gcgacagcgccagg 3073973




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 273     cggcctggcgttgc 286
               ||||||||||||||
Sbjct: 3108194 cggcctggcgttgc 3108181




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 272     gcggcctggcgttg 285
               ||||||||||||||
Sbjct: 3111794 gcggcctggcgttg 3111781




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 145     cagcgccagggtct 158
               ||||||||||||||
Sbjct: 3160862 cagcgccagggtct 3160875




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 222     ggtactgggcgaac 235
               ||||||||||||||
Sbjct: 3226279 ggtactgggcgaac 3226292




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                 
Query: 144     acagcgccagggtctcgg 161
               ||||||||||||| ||||
Sbjct: 3285259 acagcgccagggtgtcgg 3285242




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 17/18 (94%)
 Strand = Plus / Plus

                                 
Query: 140     ggcgacagcgccagggtc 157
               |||||||||||| |||||
Sbjct: 3355094 ggcgacagcgcccgggtc 3355111




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 112     ggcctcgcgccgct 125
               ||||||||||||||
Sbjct: 3496375 ggcctcgcgccgct 3496388




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 129     ggtggcgcccgggc 142
               ||||||||||||||
Sbjct: 4108923 ggtggcgcccgggc 4108936




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 221     tggtactgggcgaa 234
               ||||||||||||||
Sbjct: 4150501 tggtactgggcgaa 4150514




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 246     ctcgcgcttcggct 259
               ||||||||||||||
Sbjct: 4291635 ctcgcgcttcggct 4291622




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 249     gcgcttcggctttc 262
               ||||||||||||||
Sbjct: 4325508 gcgcttcggctttc 4325495




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 178     cgcctgctcaccga 191
               ||||||||||||||
Sbjct: 4353683 cgcctgctcaccga 4353696




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 278     tggcgttgcccggc 291
               ||||||||||||||
Sbjct: 4449739 tggcgttgcccggc 4449726




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 177     gcgcctgctcaccg 190
               ||||||||||||||
Sbjct: 4695210 gcgcctgctcaccg 4695223




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                 
Query: 265     gtggaaagcggcctggcg 282
               |||| |||||||||||||
Sbjct: 4817418 gtggcaagcggcctggcg 4817401




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 122     cgctatcggtggcg 135
               ||||||||||||||
Sbjct: 4984342 cgctatcggtggcg 4984329




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 84      ccggggcacttatc 97
               ||||||||||||||
Sbjct: 5041941 ccggggcacttatc 5041928




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 136     cccgggcgacagcg 149
               ||||||||||||||
Sbjct: 5138798 cccgggcgacagcg 5138811




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 174     ccggcgcctgctca 187
               ||||||||||||||
Sbjct: 5148827 ccggcgcctgctca 5148840




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 272     gcggcctggcgttg 285
               ||||||||||||||
Sbjct: 5214750 gcggcctggcgttg 5214737




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 17/18 (94%)
 Strand = Plus / Plus

                                 
Query: 217     tgcgtggtactgggcgaa 234
               ||||||||||||| ||||
Sbjct: 5433774 tgcgtggtactggacgaa 5433791




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 273     cggcctggcgttgc 286
               ||||||||||||||
Sbjct: 5456518 cggcctggcgttgc 5456505




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 164     cgcagttggtccgg 177
               ||||||||||||||
Sbjct: 5710297 cgcagttggtccgg 5710284




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 210     gggtggctgcgtgg 223
               ||||||||||||||
Sbjct: 5811048 gggtggctgcgtgg 5811061




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 289     ggcgttcccgccga 302
               ||||||||||||||
Sbjct: 5965414 ggcgttcccgccga 5965427




 Score = 28.2 bits (14), Expect = 6.9
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 145     cagcgccagggtct 158
               ||||||||||||||
Sbjct: 6258869 cagcgccagggtct 6258856




  Database: pa14
    Posted date:  Jan 15, 2004  3:01 PM
  Number of letters in database: 6,534,396
  Number of sequences in database:  1
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3333
Number of Sequences: 1
Number of extensions: 3333
Number of successful extensions: 97
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 97
length of query: 353
length of database: 6,534,396
effective HSP length: 16
effective length of query: 337
effective length of database: 6,534,380
effective search space: 2202086060
effective search space used: 2202086060
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)