BLAST Search Results

BLASTN 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: pa14 
           1 sequences; 6,534,396 total letters



Query= 
         (239 letters)

Distribution of 90 Blast Hits on the Query Sequence



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GCTS_68                                                           180   5e-46 

>GCTS_68 
          Length = 6534396

 Score =  180 bits (91), Expect = 5e-46
 Identities = 94/95 (98%)
 Strand = Plus / Plus

                                                                           
Query: 105     tacaaggcgcgctcgctggaggaacgccaggcgatgatcgccgcggtggcggggatcagt 164
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6030137 tacaaggcgcgctcgctggaggaacgccaggcgatgatcgccgcggtggcggggatcagt 6030196

                                                  
Query: 165     ccgatcggcctgcgccacgatacgcgcgagaccca 199
               ||||||||||||||||||||| |||||||||||||
Sbjct: 6030197 ccgatcggcctgcgccacgatccgcgcgagaccca 6030231




 Score = 42.1 bits (21), Expect = 3e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 219     ctgatcgcgctgcccgaggac 239
               |||||||||||||||||||||
Sbjct: 6030251 ctgatcgcgctgcccgaggac 6030271




 Score = 34.2 bits (17), Expect = 0.075
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 167     gatcggcctgcgccacg 183
               |||||||||||||||||
Sbjct: 1661405 gatcggcctgcgccacg 1661421




 Score = 34.2 bits (17), Expect = 0.075
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 223     tcgcgctgcccgaggac 239
               |||||||||||||||||
Sbjct: 2551169 tcgcgctgcccgaggac 2551185




 Score = 32.2 bits (16), Expect = 0.29
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                              
Query: 132    caggcgatgatcgccg 147
              ||||||||||||||||
Sbjct: 183632 caggcgatgatcgccg 183647




 Score = 32.2 bits (16), Expect = 0.29
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                   
Query: 133     aggcgatgatcgccgcggtg 152
               ||||||||||||||| ||||
Sbjct: 2443490 aggcgatgatcgccgaggtg 2443471




 Score = 32.2 bits (16), Expect = 0.29
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 112     cgcgctcgctggagga 127
               ||||||||||||||||
Sbjct: 2543813 cgcgctcgctggagga 2543828




 Score = 32.2 bits (16), Expect = 0.29
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 134     ggcgatgatcgccgcg 149
               ||||||||||||||||
Sbjct: 2958585 ggcgatgatcgccgcg 2958570




 Score = 32.2 bits (16), Expect = 0.29
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 134     ggcgatgatcgccgcg 149
               ||||||||||||||||
Sbjct: 3369607 ggcgatgatcgccgcg 3369622




 Score = 32.2 bits (16), Expect = 0.29
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 170     cggcctgcgccacgat 185
               ||||||||||||||||
Sbjct: 5054377 cggcctgcgccacgat 5054392




 Score = 32.2 bits (16), Expect = 0.29
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 165     ccgatcggcctgcgcc 180
               ||||||||||||||||
Sbjct: 5766493 ccgatcggcctgcgcc 5766478




 Score = 32.2 bits (16), Expect = 0.29
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 133     aggcgatgatcgccgc 148
               ||||||||||||||||
Sbjct: 6390483 aggcgatgatcgccgc 6390498




 Score = 30.2 bits (15), Expect = 1.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 167    gatcggcctgcgcca 181
              |||||||||||||||
Sbjct: 109082 gatcggcctgcgcca 109068




 Score = 30.2 bits (15), Expect = 1.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 138    atgatcgccgcggtg 152
              |||||||||||||||
Sbjct: 435053 atgatcgccgcggtg 435039




 Score = 30.2 bits (15), Expect = 1.2
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                 
Query: 134    ggcgatgatcgccgcggtg 152
              ||||| |||||||||||||
Sbjct: 699130 ggcgacgatcgccgcggtg 699112




 Score = 30.2 bits (15), Expect = 1.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 139    tgatcgccgcggtgg 153
              |||||||||||||||
Sbjct: 886625 tgatcgccgcggtgg 886639




 Score = 30.2 bits (15), Expect = 1.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 136    cgatgatcgccgcgg 150
              |||||||||||||||
Sbjct: 990911 cgatgatcgccgcgg 990925




 Score = 30.2 bits (15), Expect = 1.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 135     gcgatgatcgccgcg 149
               |||||||||||||||
Sbjct: 1234540 gcgatgatcgccgcg 1234526




 Score = 30.2 bits (15), Expect = 1.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 122     ggaggaacgccaggc 136
               |||||||||||||||
Sbjct: 1568375 ggaggaacgccaggc 1568389




 Score = 30.2 bits (15), Expect = 1.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 168     atcggcctgcgccac 182
               |||||||||||||||
Sbjct: 1638618 atcggcctgcgccac 1638632




 Score = 30.2 bits (15), Expect = 1.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 143     cgccgcggtggcggg 157
               |||||||||||||||
Sbjct: 1869961 cgccgcggtggcggg 1869947




 Score = 30.2 bits (15), Expect = 1.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 123     gaggaacgccaggcg 137
               |||||||||||||||
Sbjct: 2055218 gaggaacgccaggcg 2055232




 Score = 30.2 bits (15), Expect = 1.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 135     gcgatgatcgccgcg 149
               |||||||||||||||
Sbjct: 2568229 gcgatgatcgccgcg 2568243




 Score = 30.2 bits (15), Expect = 1.2
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 135     gcgatgatcgccgcggtgg 153
               ||||| |||||||||||||
Sbjct: 3135346 gcgatcatcgccgcggtgg 3135364




 Score = 30.2 bits (15), Expect = 1.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 124     aggaacgccaggcga 138
               |||||||||||||||
Sbjct: 3738083 aggaacgccaggcga 3738097




 Score = 30.2 bits (15), Expect = 1.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 166     cgatcggcctgcgcc 180
               |||||||||||||||
Sbjct: 3747953 cgatcggcctgcgcc 3747939




 Score = 30.2 bits (15), Expect = 1.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 134     ggcgatgatcgccgc 148
               |||||||||||||||
Sbjct: 4378599 ggcgatgatcgccgc 4378613




 Score = 30.2 bits (15), Expect = 1.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 141     atcgccgcggtggcg 155
               |||||||||||||||
Sbjct: 4795010 atcgccgcggtggcg 4794996




 Score = 30.2 bits (15), Expect = 1.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 142     tcgccgcggtggcgg 156
               |||||||||||||||
Sbjct: 5016200 tcgccgcggtggcgg 5016214




 Score = 30.2 bits (15), Expect = 1.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 140     gatcgccgcggtggc 154
               |||||||||||||||
Sbjct: 5145547 gatcgccgcggtggc 5145533




 Score = 30.2 bits (15), Expect = 1.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 156     gggatcagtccgatc 170
               |||||||||||||||
Sbjct: 5183738 gggatcagtccgatc 5183724




 Score = 30.2 bits (15), Expect = 1.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 122     ggaggaacgccaggc 136
               |||||||||||||||
Sbjct: 5294995 ggaggaacgccaggc 5295009




 Score = 30.2 bits (15), Expect = 1.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 142     tcgccgcggtggcgg 156
               |||||||||||||||
Sbjct: 5448237 tcgccgcggtggcgg 5448223




 Score = 30.2 bits (15), Expect = 1.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 114     cgctcgctggaggaa 128
               |||||||||||||||
Sbjct: 5703409 cgctcgctggaggaa 5703395




 Score = 30.2 bits (15), Expect = 1.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 118     cgctggaggaacgcc 132
               |||||||||||||||
Sbjct: 5714043 cgctggaggaacgcc 5714057




 Score = 30.2 bits (15), Expect = 1.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 134     ggcgatgatcgccgc 148
               |||||||||||||||
Sbjct: 6208825 ggcgatgatcgccgc 6208839




 Score = 30.2 bits (15), Expect = 1.2
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 135     gcgatgatcgccgcggtgg 153
               ||||||| |||||||||||
Sbjct: 6393463 gcgatgagcgccgcggtgg 6393481




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                           
Query: 119   gctggaggaacgcc 132
             ||||||||||||||
Sbjct: 55937 gctggaggaacgcc 55924




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 130    gccaggcgatgatc 143
              ||||||||||||||
Sbjct: 135093 gccaggcgatgatc 135080




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 169    tcggcctgcgccac 182
              ||||||||||||||
Sbjct: 230585 tcggcctgcgccac 230598




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 108    aaggcgcgctcgct 121
              ||||||||||||||
Sbjct: 507363 aaggcgcgctcgct 507350




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 139    tgatcgccgcggtg 152
              ||||||||||||||
Sbjct: 509866 tgatcgccgcggtg 509853




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 140    gatcgccgcggtgg 153
              ||||||||||||||
Sbjct: 587530 gatcgccgcggtgg 587543




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 189    cgcgagacccatcg 202
              ||||||||||||||
Sbjct: 688763 cgcgagacccatcg 688750




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 124    aggaacgccaggcg 137
              ||||||||||||||
Sbjct: 713934 aggaacgccaggcg 713921




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 119    gctggaggaacgcc 132
              ||||||||||||||
Sbjct: 772057 gctggaggaacgcc 772070




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                 
Query: 118     cgctggaggaacgccagg 135
               |||||| |||||||||||
Sbjct: 1155137 cgctggcggaacgccagg 1155120




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 136     cgatgatcgccgcg 149
               ||||||||||||||
Sbjct: 1600440 cgatgatcgccgcg 1600427




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 149     ggtggcggggatca 162
               ||||||||||||||
Sbjct: 1842247 ggtggcggggatca 1842234




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 219     ctgatcgcgctgcc 232
               ||||||||||||||
Sbjct: 1851468 ctgatcgcgctgcc 1851455




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 225     gcgctgcccgagga 238
               ||||||||||||||
Sbjct: 1920774 gcgctgcccgagga 1920761




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 113     gcgctcgctggagg 126
               ||||||||||||||
Sbjct: 1977589 gcgctcgctggagg 1977576




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 17/18 (94%)
 Strand = Plus / Plus

                                 
Query: 120     ctggaggaacgccaggcg 137
               |||| |||||||||||||
Sbjct: 2033277 ctggcggaacgccaggcg 2033294




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 119     gctggaggaacgcc 132
               ||||||||||||||
Sbjct: 2069061 gctggaggaacgcc 2069074




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 123     gaggaacgccaggc 136
               ||||||||||||||
Sbjct: 2293041 gaggaacgccaggc 2293054




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                 
Query: 132     caggcgatgatcgccgcg 149
               |||||||||||| |||||
Sbjct: 2365946 caggcgatgatcaccgcg 2365929




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 139     tgatcgccgcggtg 152
               ||||||||||||||
Sbjct: 2677376 tgatcgccgcggtg 2677363




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 152     ggcggggatcagtc 165
               ||||||||||||||
Sbjct: 2700714 ggcggggatcagtc 2700701




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 164     tccgatcggcctgc 177
               ||||||||||||||
Sbjct: 2738694 tccgatcggcctgc 2738681




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 104     ttacaaggcgcgct 117
               ||||||||||||||
Sbjct: 2793215 ttacaaggcgcgct 2793202




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 171     ggcctgcgccacga 184
               ||||||||||||||
Sbjct: 2834366 ggcctgcgccacga 2834353




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 149     ggtggcggggatca 162
               ||||||||||||||
Sbjct: 2955924 ggtggcggggatca 2955911




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 118     cgctggaggaacgc 131
               ||||||||||||||
Sbjct: 2962850 cgctggaggaacgc 2962837




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 110     ggcgcgctcgctgg 123
               ||||||||||||||
Sbjct: 3240866 ggcgcgctcgctgg 3240853




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 122     ggaggaacgccagg 135
               ||||||||||||||
Sbjct: 3323681 ggaggaacgccagg 3323668




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 168     atcggcctgcgcca 181
               ||||||||||||||
Sbjct: 3328899 atcggcctgcgcca 3328912




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 133     aggcgatgatcgcc 146
               ||||||||||||||
Sbjct: 3654551 aggcgatgatcgcc 3654564




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 170     cggcctgcgccacg 183
               ||||||||||||||
Sbjct: 3663369 cggcctgcgccacg 3663382




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 17/18 (94%)
 Strand = Plus / Plus

                                 
Query: 134     ggcgatgatcgccgcggt 151
               ||||||||||||| ||||
Sbjct: 3742339 ggcgatgatcgccccggt 3742356




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 110     ggcgcgctcgctgg 123
               ||||||||||||||
Sbjct: 3819245 ggcgcgctcgctgg 3819232




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 118     cgctggaggaacgc 131
               ||||||||||||||
Sbjct: 3837853 cgctggaggaacgc 3837866




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 134     ggcgatgatcgccg 147
               ||||||||||||||
Sbjct: 4060312 ggcgatgatcgccg 4060325




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 123     gaggaacgccaggc 136
               ||||||||||||||
Sbjct: 4274082 gaggaacgccaggc 4274069




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 139     tgatcgccgcggtg 152
               ||||||||||||||
Sbjct: 4286207 tgatcgccgcggtg 4286194




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 142     tcgccgcggtggcg 155
               ||||||||||||||
Sbjct: 4287791 tcgccgcggtggcg 4287778




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 126     gaacgccaggcgat 139
               ||||||||||||||
Sbjct: 4401981 gaacgccaggcgat 4401968




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 17/18 (94%)
 Strand = Plus / Plus

                                 
Query: 110     ggcgcgctcgctggagga 127
               ||||| ||||||||||||
Sbjct: 4405972 ggcgccctcgctggagga 4405989




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 116     ctcgctggaggaac 129
               ||||||||||||||
Sbjct: 4451598 ctcgctggaggaac 4451611




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 134     ggcgatgatcgccg 147
               ||||||||||||||
Sbjct: 4731655 ggcgatgatcgccg 4731668




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 134     ggcgatgatcgccg 147
               ||||||||||||||
Sbjct: 4977327 ggcgatgatcgccg 4977314




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 123     gaggaacgccaggc 136
               ||||||||||||||
Sbjct: 5032865 gaggaacgccaggc 5032878




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 134     ggcgatgatcgccg 147
               ||||||||||||||
Sbjct: 5216558 ggcgatgatcgccg 5216571




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 123     gaggaacgccaggc 136
               ||||||||||||||
Sbjct: 5334280 gaggaacgccaggc 5334293




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 134     ggcgatgatcgccg 147
               ||||||||||||||
Sbjct: 5370332 ggcgatgatcgccg 5370319




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                 
Query: 220     tgatcgcgctgcccgagg 237
               |||||| |||||||||||
Sbjct: 5671380 tgatcgagctgcccgagg 5671363




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 134     ggcgatgatcgccg 147
               ||||||||||||||
Sbjct: 5693996 ggcgatgatcgccg 5694009




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 136     cgatgatcgccgcg 149
               ||||||||||||||
Sbjct: 5695274 cgatgatcgccgcg 5695261




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 133     aggcgatgatcgcc 146
               ||||||||||||||
Sbjct: 5739881 aggcgatgatcgcc 5739868




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 140     gatcgccgcggtgg 153
               ||||||||||||||
Sbjct: 5833174 gatcgccgcggtgg 5833187




 Score = 28.2 bits (14), Expect = 4.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 150     gtggcggggatcag 163
               ||||||||||||||
Sbjct: 5937239 gtggcggggatcag 5937226




  Database: pa14
    Posted date:  Jan 15, 2004  3:01 PM
  Number of letters in database: 6,534,396
  Number of sequences in database:  1
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2688
Number of Sequences: 1
Number of extensions: 2688
Number of successful extensions: 90
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 90
length of query: 239
length of database: 6,534,396
effective HSP length: 15
effective length of query: 224
effective length of database: 6,534,381
effective search space: 1463701344
effective search space used: 1463701344
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)