BLAST Search Results

BLASTN 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: pa14 
           1 sequences; 6,534,396 total letters



Query= 
         (910 letters)

Distribution of 121 Blast Hits on the Query Sequence



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GCTS_68                                                           801   0.0   

>GCTS_68 
          Length = 6534396

 Score =  801 bits (404), Expect = 0.0
 Identities = 515/547 (94%), Gaps = 5/547 (0%)
 Strand = Plus / Plus

                                                                           
Query: 63      tacggccagcgccagtacgaggtcacctgccgcccggcgcagggcgtggccgccgccgac 122
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5737034 tacggccagcgccagtacgaggtcacctgccgcccggcgcagggcgtggccgccgccgac 5737093

                                                                           
Query: 123     cgcgcggtgaacgtccgcgaggtcactcgcgaagtggcgcggcagatgggcctgcgtacc 182
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5737094 cgcgcggtgaacgtccgcgaggtcactcgcgaagtggcgcggcagatgggcctgcgtacc 5737153

                                                                           
Query: 183     tgcttcgcaccgctgccggcacccggcgcggtgaccaacggggtacacctgcacctgagc 242
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5737154 tgcttcgcaccgctgccggcacccggcgcggtgaccaacggggtacacctgcacctgagc 5737213

                                                                           
Query: 243     ctgcaacatgccgacggcagcccgctgctgtacgagcccggacgacccaacgatctctcc 302
               ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 5737214 ctgcaacatgccgacggcagcccgctgctgtacgagcccggtcgacccaacgatctctcc 5737273

                                                                           
Query: 303     gaactcggcgagcactgggccgccggcgtgctcgcgcacctgccggcgctgtgcgcgctg 362
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5737274 gaactcggcgagcactgggccgccggcgtgctcgcgcacctgccggcgctgtgcgcgctg 5737333

                                                                           
Query: 363     accgcgcataccgccgcctcctatctgctgcaggcacggcaacactggagcgccgcctac 422
               ||||||| ||||||||||||||| ||||  | |  ||  || ||||||||||||||||||
Sbjct: 5737334 accgcgcctaccgccgcctcctacctgcgcctgaaaccccaccactggagcgccgcctac 5737393

                                                                           
Query: 423     gcctgcctgggactgcgcaaccgcgaagcggcgcttcgcatctgccccgtggtgagcgtc 482
               ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 5737394 gcctgcctgggactgcgcaaccgcgaagcggcgctgcgcatctgcccggtggtgagcgtc 5737453

                                                                           
Query: 483     ggccggcaa-ccgcttgggaagcagtacaaaccctggaatccccggccgatgtacgccac 541
               || |||||| ||||| || |||||||||||  ||||||||  |||||||||| |||||||
Sbjct: 5737454 gg-cggcaagccgctgggcaagcagtacaa--cctggaat-tccggccgatggacgccac 5737509

                                                                           
Query: 542     ccgctgtccccacccggcaatggccgtggtgctgatcgccggtctcctgggcttcgaacg 601
               |  |||||| |||| ||| ||||||| ||||||||||||||| | ||||||| |||||||
Sbjct: 5737510 cgcctgtccgcacctggcgatggccgcggtgctgatcgccggccgcctgggcatcgaacg 5737569

                      
Query: 602     aagcctg 608
               | |||||
Sbjct: 5737570 acgcctg 5737576




 Score = 36.2 bits (18), Expect = 0.075
 Identities = 24/26 (92%)
 Strand = Plus / Plus

                                       
Query: 158   ggcgcggcagatgggcctgcgtacct 183
             |||||||||||| | |||||||||||
Sbjct: 45194 ggcgcggcagatcgtcctgcgtacct 45219




 Score = 36.2 bits (18), Expect = 0.075
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                     
Query: 434     actgcgcaaccgcgaagcggcg 455
               ||||| ||||||||||||||||
Sbjct: 5638949 actgcccaaccgcgaagcggcg 5638970




 Score = 34.2 bits (17), Expect = 0.30
 Identities = 20/21 (95%)
 Strand = Plus / Minus

                                    
Query: 116     cgccgaccgcgcggtgaacgt 136
               |||||| ||||||||||||||
Sbjct: 2046632 cgccgagcgcgcggtgaacgt 2046612




 Score = 34.2 bits (17), Expect = 0.30
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 111     gccgccgccgaccgcgc 127
               |||||||||||||||||
Sbjct: 2400169 gccgccgccgaccgcgc 2400185




 Score = 34.2 bits (17), Expect = 0.30
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 110     ggccgccgccgaccgcg 126
               |||||||||||||||||
Sbjct: 3480609 ggccgccgccgaccgcg 3480593




 Score = 34.2 bits (17), Expect = 0.30
 Identities = 23/25 (92%)
 Strand = Plus / Plus

                                        
Query: 321     gccgccggcgtgctcgcgcacctgc 345
               |||||||||||| | ||||||||||
Sbjct: 4069796 gccgccggcgtgatggcgcacctgc 4069820




 Score = 34.2 bits (17), Expect = 0.30
 Identities = 23/25 (92%)
 Strand = Plus / Plus

                                        
Query: 234     cacctgagcctgcaacatgccgacg 258
               |||||| |||| |||||||||||||
Sbjct: 4172966 cacctgcgcctacaacatgccgacg 4172990




 Score = 34.2 bits (17), Expect = 0.30
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 98      ggcgcagggcgtggccg 114
               |||||||||||||||||
Sbjct: 4351920 ggcgcagggcgtggccg 4351904




 Score = 34.2 bits (17), Expect = 0.30
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 684     ccaggccttgcccggag 700
               |||||||||||||||||
Sbjct: 5556520 ccaggccttgcccggag 5556504




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                             
Query: 613   ctgcgcagccctggcc 628
             ||||||||||||||||
Sbjct: 15483 ctgcgcagccctggcc 15498




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                             
Query: 301   ccgaactcggcgagca 316
             ||||||||||||||||
Sbjct: 16835 ccgaactcggcgagca 16850




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                              
Query: 566    cgtggtgctgatcgcc 581
              ||||||||||||||||
Sbjct: 429351 cgtggtgctgatcgcc 429336




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                              
Query: 112    ccgccgccgaccgcgc 127
              ||||||||||||||||
Sbjct: 695531 ccgccgccgaccgcgc 695546




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                  
Query: 102    cagggcgtggccgccgccga 121
              |||||||||||| |||||||
Sbjct: 715009 cagggcgtggccaccgccga 714990




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 116     cgccgaccgcgcggtg 131
               ||||||||||||||||
Sbjct: 1086005 cgccgaccgcgcggtg 1086020




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 249     catgccgacggcagcc 264
               ||||||||||||||||
Sbjct: 1116047 catgccgacggcagcc 1116032




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 158     ggcgcggcagatgggc 173
               ||||||||||||||||
Sbjct: 1685190 ggcgcggcagatgggc 1685205




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 321     gccgccggcgtgctcg 336
               ||||||||||||||||
Sbjct: 1888421 gccgccggcgtgctcg 1888406




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 323     cgccggcgtgctcgcg 338
               ||||||||||||||||
Sbjct: 2031422 cgccggcgtgctcgcg 2031437




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 156     gtggcgcggcagatgg 171
               ||||||||||||||||
Sbjct: 2210996 gtggcgcggcagatgg 2210981




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 152     cgaagtggcgcggcag 167
               ||||||||||||||||
Sbjct: 2335074 cgaagtggcgcggcag 2335059




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 405     cactggagcgccgcct 420
               ||||||||||||||||
Sbjct: 2400227 cactggagcgccgcct 2400242




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 342     ctgccggcgctgtgcg 357
               ||||||||||||||||
Sbjct: 2654989 ctgccggcgctgtgcg 2655004




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 111     gccgccgccgaccgcg 126
               ||||||||||||||||
Sbjct: 2874212 gccgccgccgaccgcg 2874227




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 321     gccgccggcgtgctcgcgca 340
               |||||||||||| |||||||
Sbjct: 3166166 gccgccggcgtggtcgcgca 3166185




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 65      cggccagcgccagtac 80
               ||||||||||||||||
Sbjct: 3265212 cggccagcgccagtac 3265227




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 260     cagcccgctgctgtac 275
               ||||||||||||||||
Sbjct: 3319861 cagcccgctgctgtac 3319876




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 326     cggcgtgctcgcgcac 341
               ||||||||||||||||
Sbjct: 3617172 cggcgtgctcgcgcac 3617187




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 334     tcgcgcacctgccggc 349
               ||||||||||||||||
Sbjct: 3661848 tcgcgcacctgccggc 3661833




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 254     cgacggcagcccgctg 269
               ||||||||||||||||
Sbjct: 3745338 cgacggcagcccgctg 3745323




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 249     catgccgacggcagcc 264
               ||||||||||||||||
Sbjct: 4478760 catgccgacggcagcc 4478745




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 338     gcacctgccggcgctg 353
               ||||||||||||||||
Sbjct: 5113079 gcacctgccggcgctg 5113064




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 197     gccggcacccggcgcggtga 216
               ||||||||||||| ||||||
Sbjct: 5127303 gccggcacccggctcggtga 5127322




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 567     gtggtgctgatcgccg 582
               ||||||||||||||||
Sbjct: 5857619 gtggtgctgatcgccg 5857604




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 317     ctgggccgccggcgtg 332
               ||||||||||||||||
Sbjct: 6136758 ctgggccgccggcgtg 6136773




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 231     ctgcacctgagcctgc 246
               ||||||||||||||||
Sbjct: 6330730 ctgcacctgagcctgc 6330715




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                            
Query: 675   cctggccatccaggc 689
             |||||||||||||||
Sbjct: 52891 cctggccatccaggc 52877




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                            
Query: 331   tgctcgcgcacctgc 345
             |||||||||||||||
Sbjct: 65416 tgctcgcgcacctgc 65402




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 112    ccgccgccgaccgcg 126
              |||||||||||||||
Sbjct: 122233 ccgccgccgaccgcg 122247




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 104    gggcgtggccgccgc 118
              |||||||||||||||
Sbjct: 188984 gggcgtggccgccgc 188998




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                 
Query: 94     gcccggcgcagggcgtggc 112
              |||||||||||||| ||||
Sbjct: 248022 gcccggcgcagggcctggc 248004




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                 
Query: 413    cgccgcctacgcctgcctg 431
              ||||||||||||| |||||
Sbjct: 350149 cgccgcctacgcccgcctg 350131




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 680    ccatccaggccttgc 694
              |||||||||||||||
Sbjct: 445380 ccatccaggccttgc 445394




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 567    gtggtgctgatcgcc 581
              |||||||||||||||
Sbjct: 543373 gtggtgctgatcgcc 543359




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 356    cgcgctgaccgcgca 370
              |||||||||||||||
Sbjct: 545622 cgcgctgaccgcgca 545608




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                 
Query: 567    gtggtgctgatcgccggtc 585
              |||||||||||| ||||||
Sbjct: 767579 gtggtgctgatcaccggtc 767561




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 384    tatctgctgcaggca 398
              |||||||||||||||
Sbjct: 807542 tatctgctgcaggca 807556




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 604    gcctggctcctgcgc 618
              |||||||||||||||
Sbjct: 834004 gcctggctcctgcgc 834018




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 21/23 (91%)
 Strand = Plus / Plus

                                      
Query: 91      gccgcccggcgcagggcgtggcc 113
               ||||||||||| |||||| ||||
Sbjct: 1079372 gccgcccggcgaagggcgcggcc 1079394




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 356     cgcgctgaccgcgca 370
               |||||||||||||||
Sbjct: 1123197 cgcgctgaccgcgca 1123211




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 86      cacctgccgcccggc 100
               |||||||||||||||
Sbjct: 1246282 cacctgccgcccggc 1246268




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 88      cctgccgcccggcgc 102
               |||||||||||||||
Sbjct: 1283054 cctgccgcccggcgc 1283040




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 110     ggccgccgccgaccg 124
               |||||||||||||||
Sbjct: 1315421 ggccgccgccgaccg 1315435




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 301     ccgaactcggcgagc 315
               |||||||||||||||
Sbjct: 1398016 ccgaactcggcgagc 1398030




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 412     gcgccgcctacgcct 426
               |||||||||||||||
Sbjct: 1403587 gcgccgcctacgcct 1403573




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 111     gccgccgccgaccgc 125
               |||||||||||||||
Sbjct: 1420413 gccgccgccgaccgc 1420399




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 321     gccgccggcgtgctc 335
               |||||||||||||||
Sbjct: 1615858 gccgccggcgtgctc 1615872




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 113     cgccgccgaccgcgcggtg 131
               ||||||||||||| |||||
Sbjct: 1631212 cgccgccgaccgcccggtg 1631230




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 97      cggcgcagggcgtgg 111
               |||||||||||||||
Sbjct: 1801224 cggcgcagggcgtgg 1801238




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 111     gccgccgccgaccgcgcgg 129
               |||| ||||||||||||||
Sbjct: 2081282 gccggcgccgaccgcgcgg 2081264




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 190     caccgctgccggcacccgg 208
               |||||| ||||||||||||
Sbjct: 2126028 caccgccgccggcacccgg 2126046




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 289     ccaacgatctctccg 303
               |||||||||||||||
Sbjct: 2182318 ccaacgatctctccg 2182332




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 586     tcctgggcttcgaac 600
               |||||||||||||||
Sbjct: 2221804 tcctgggcttcgaac 2221790




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 675     cctggccatccaggc 689
               |||||||||||||||
Sbjct: 2284819 cctggccatccaggc 2284805




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 326     cggcgtgctcgcgca 340
               |||||||||||||||
Sbjct: 2346647 cggcgtgctcgcgca 2346633




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 427     gcctgggactgcgca 441
               |||||||||||||||
Sbjct: 2387104 gcctgggactgcgca 2387118




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 198     ccggcacccggcgcg 212
               |||||||||||||||
Sbjct: 2444022 ccggcacccggcgcg 2444036




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 195     ctgccggcacccggc 209
               |||||||||||||||
Sbjct: 2526212 ctgccggcacccggc 2526226




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 194     gctgccggcacccggcgcg 212
               ||||||||||||| |||||
Sbjct: 2584335 gctgccggcacccagcgcg 2584353




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 21/23 (91%)
 Strand = Plus / Plus

                                      
Query: 566     cgtggtgctgatcgccggtctcc 588
               |||||||||  ||||||||||||
Sbjct: 2596683 cgtggtgctcttcgccggtctcc 2596705




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 117     gccgaccgcgcggtgaacg 135
               ||||||| |||||||||||
Sbjct: 2676315 gccgaccacgcggtgaacg 2676297




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 418     cctacgcctgcctgg 432
               |||||||||||||||
Sbjct: 2749729 cctacgcctgcctgg 2749715




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 406     actggagcgccgcct 420
               |||||||||||||||
Sbjct: 2974317 actggagcgccgcct 2974331




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 253     ccgacggcagcccgc 267
               |||||||||||||||
Sbjct: 2975184 ccgacggcagcccgc 2975198




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 254     cgacggcagcccgctgctg 272
               ||||||||||| |||||||
Sbjct: 2989282 cgacggcagcctgctgctg 2989300




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 94      gcccggcgcagggcg 108
               |||||||||||||||
Sbjct: 3606381 gcccggcgcagggcg 3606367




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 411     agcgccgcctacgcc 425
               |||||||||||||||
Sbjct: 3617906 agcgccgcctacgcc 3617892




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 320     ggccgccggcgtgct 334
               |||||||||||||||
Sbjct: 3618663 ggccgccggcgtgct 3618649




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 21/23 (91%)
 Strand = Plus / Plus

                                      
Query: 105     ggcgtggccgccgccgaccgcgc 127
               ||||| |||||||||||| ||||
Sbjct: 3703093 ggcgtagccgccgccgacggcgc 3703115




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 210     gcggtgaccaacggg 224
               |||||||||||||||
Sbjct: 3751348 gcggtgaccaacggg 3751334




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 427     gcctgggactgcgcaaccg 445
               |||||||||||||| ||||
Sbjct: 3777060 gcctgggactgcgccaccg 3777078




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 577     tcgccggtctcctgg 591
               |||||||||||||||
Sbjct: 3852344 tcgccggtctcctgg 3852358




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 196     tgccggcacccggcg 210
               |||||||||||||||
Sbjct: 3871148 tgccggcacccggcg 3871162




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 111     gccgccgccgaccgc 125
               |||||||||||||||
Sbjct: 3934838 gccgccgccgaccgc 3934852




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 205     ccggcgcggtgacca 219
               |||||||||||||||
Sbjct: 4059746 ccggcgcggtgacca 4059732




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 315     cactgggccgccggc 329
               |||||||||||||||
Sbjct: 4082008 cactgggccgccggc 4082022




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 301     ccgaactcggcgagc 315
               |||||||||||||||
Sbjct: 4146645 ccgaactcggcgagc 4146659




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 21/23 (91%)
 Strand = Plus / Minus

                                      
Query: 308     cggcgagcactgggccgccggcg 330
               |||||| ||| ||||||||||||
Sbjct: 4269517 cggcgaacaccgggccgccggcg 4269495




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 568     tggtgctgatcgccg 582
               |||||||||||||||
Sbjct: 4277479 tggtgctgatcgccg 4277493




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 205     ccggcgcggtgacca 219
               |||||||||||||||
Sbjct: 4292288 ccggcgcggtgacca 4292302




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 21/23 (91%)
 Strand = Plus / Minus

                                      
Query: 97      cggcgcagggcgtggccgccgcc 119
               ||||||||| | |||||||||||
Sbjct: 4602827 cggcgcaggtcctggccgccgcc 4602805




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 114     gccgccgaccgcgcg 128
               |||||||||||||||
Sbjct: 4631913 gccgccgaccgcgcg 4631899




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 204     cccggcgcggtgacc 218
               |||||||||||||||
Sbjct: 4648176 cccggcgcggtgacc 4648190




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 21/23 (91%)
 Strand = Plus / Plus

                                      
Query: 253     ccgacggcagcccgctgctgtac 275
               |||||||||||| || |||||||
Sbjct: 4755958 ccgacggcagcctgccgctgtac 4755980




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 321     gccgccggcgtgctc 335
               |||||||||||||||
Sbjct: 4757301 gccgccggcgtgctc 4757287




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 113     cgccgccgaccgcgc 127
               |||||||||||||||
Sbjct: 4791865 cgccgccgaccgcgc 4791879




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 321     gccgccggcgtgctc 335
               |||||||||||||||
Sbjct: 4793665 gccgccggcgtgctc 4793651




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 94      gcccggcgcagggcg 108
               |||||||||||||||
Sbjct: 4828416 gcccggcgcagggcg 4828430




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 533     gtacgccacccgctg 547
               |||||||||||||||
Sbjct: 4839733 gtacgccacccgctg 4839747




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 254     cgacggcagcccgctgctg 272
               ||||||||||| |||||||
Sbjct: 5032279 cgacggcagcctgctgctg 5032261




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 301     ccgaactcggcgagc 315
               |||||||||||||||
Sbjct: 5034842 ccgaactcggcgagc 5034828




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 854     tggtgccccccacca 868
               |||||||||||||||
Sbjct: 5084484 tggtgccccccacca 5084498




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 561     atggccgtggtgctg 575
               |||||||||||||||
Sbjct: 5098080 atggccgtggtgctg 5098094




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 94      gcccggcgcagggcg 108
               |||||||||||||||
Sbjct: 5115842 gcccggcgcagggcg 5115856




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 315     cactgggccgccggc 329
               |||||||||||||||
Sbjct: 5247901 cactgggccgccggc 5247887




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 164     gcagatgggcctgcg 178
               |||||||||||||||
Sbjct: 5299164 gcagatgggcctgcg 5299150




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 434     actgcgcaaccgcga 448
               |||||||||||||||
Sbjct: 5387216 actgcgcaaccgcga 5387202




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 139     gcgaggtcactcgcg 153
               |||||||||||||||
Sbjct: 5404074 gcgaggtcactcgcg 5404088




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 113     cgccgccgaccgcgc 127
               |||||||||||||||
Sbjct: 5471869 cgccgccgaccgcgc 5471883




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 114     gccgccgaccgcgcg 128
               |||||||||||||||
Sbjct: 5537416 gccgccgaccgcgcg 5537402




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 115     ccgccgaccgcgcgg 129
               |||||||||||||||
Sbjct: 5608364 ccgccgaccgcgcgg 5608350




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 354     tgcgcgctgaccgcg 368
               |||||||||||||||
Sbjct: 5705517 tgcgcgctgaccgcg 5705503




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 250     atgccgacggcagcc 264
               |||||||||||||||
Sbjct: 5724221 atgccgacggcagcc 5724235




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 445     gcgaagcggcgcttc 459
               |||||||||||||||
Sbjct: 5749148 gcgaagcggcgcttc 5749162




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 252     gccgacggcagcccgctgc 270
               ||||||||||||| |||||
Sbjct: 5863678 gccgacggcagcctgctgc 5863660




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 675     cctggccatccaggc 689
               |||||||||||||||
Sbjct: 6133611 cctggccatccaggc 6133625




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 157     tggcgcggcagatgg 171
               |||||||||||||||
Sbjct: 6184931 tggcgcggcagatgg 6184917




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 153     gaagtggcgcggcagatgg 171
               |||| ||||||||||||||
Sbjct: 6236905 gaagcggcgcggcagatgg 6236923




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 98      ggcgcagggcgtggc 112
               |||||||||||||||
Sbjct: 6386933 ggcgcagggcgtggc 6386947




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 331     tgctcgcgcacctgc 345
               |||||||||||||||
Sbjct: 6401137 tgctcgcgcacctgc 6401123




  Database: pa14
    Posted date:  Jan 15, 2004  3:01 PM
  Number of letters in database: 6,534,396
  Number of sequences in database:  1
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,312
Number of Sequences: 1
Number of extensions: 11312
Number of successful extensions: 123
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 122
length of query: 910
length of database: 6,534,396
effective HSP length: 16
effective length of query: 894
effective length of database: 6,534,380
effective search space: 5841735720
effective search space used: 5841735720
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)