BLASTN 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: pa14 
           1 sequences; 6,534,396 total letters



Query= 
         (177 letters)

Distribution of 54 Blast Hits on the Query Sequence 



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GCTS_68                                                           190   4e-49 



>GCTS_68 
          Length = 6534396

 Score =  190 bits (96), Expect = 4e-49
 Identities = 96/96 (100%)
 Strand = Plus / Minus

                                                                          
Query: 64     tagcggcaccgacctgccggtgatggtctacaacaacccgccgatctaccggaacgatgt 123
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682219 tagcggcaccgacctgccggtgatggtctacaacaacccgccgatctaccggaacgatgt 682160

                                                  
Query: 124    caccccggacatcctggtttccctggccgactgcga 159
              ||||||||||||||||||||||||||||||||||||
Sbjct: 682159 caccccggacatcctggtttccctggccgactgcga 682124






 Score = 44.1 bits (22), Expect = 6e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 78      tgccggtgatggtctacaacaacccg 103
               ||||||||||| ||||||||||||||
Sbjct: 6044895 tgccggtgatgctctacaacaacccg 6044870






 Score = 36.2 bits (18), Expect = 0.014
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                     
Query: 66      gcggcaccgacctgccggtgat 87
               |||||| |||||||||||||||
Sbjct: 4120530 gcggcatcgacctgccggtgat 4120509






 Score = 32.2 bits (16), Expect = 0.21
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 71      accgacctgccggtga 86
               ||||||||||||||||
Sbjct: 2596486 accgacctgccggtga 2596501






 Score = 32.2 bits (16), Expect = 0.21
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                   
Query: 73      cgacctgccggtgatggtct 92
               ||||||||||| ||||||||
Sbjct: 5306171 cgacctgccggcgatggtct 5306152






 Score = 32.2 bits (16), Expect = 0.21
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 72      ccgacctgccggtgat 87
               ||||||||||||||||
Sbjct: 5351660 ccgacctgccggtgat 5351675






 Score = 30.2 bits (15), Expect = 0.84
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 117    acgatgtcaccccgg 131
              |||||||||||||||
Sbjct: 891103 acgatgtcaccccgg 891117






 Score = 30.2 bits (15), Expect = 0.84
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 157     cgacatcatctgctg 171
               |||||||||||||||
Sbjct: 1314810 cgacatcatctgctg 1314796






 Score = 30.2 bits (15), Expect = 0.84
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 66      gcggcaccgacctgc 80
               |||||||||||||||
Sbjct: 1689135 gcggcaccgacctgc 1689121






 Score = 30.2 bits (15), Expect = 0.84
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 85      gatggtctacaacaa 99
               |||||||||||||||
Sbjct: 1967535 gatggtctacaacaa 1967549






 Score = 30.2 bits (15), Expect = 0.84
 Identities = 21/23 (91%)
 Strand = Plus / Plus

                                      
Query: 65      agcggcaccgacctgccggtgat 87
               ||||||||||||  |||||||||
Sbjct: 2052998 agcggcaccgactcgccggtgat 2053020






 Score = 30.2 bits (15), Expect = 0.84
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 66      gcggcaccgacctgc 80
               |||||||||||||||
Sbjct: 3131338 gcggcaccgacctgc 3131324






 Score = 30.2 bits (15), Expect = 0.84
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 65      agcggcaccgacctg 79
               |||||||||||||||
Sbjct: 3445978 agcggcaccgacctg 3445992






 Score = 30.2 bits (15), Expect = 0.84
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 65      agcggcaccgacctg 79
               |||||||||||||||
Sbjct: 3742587 agcggcaccgacctg 3742573






 Score = 30.2 bits (15), Expect = 0.84
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 78      tgccggtgatggtct 92
               |||||||||||||||
Sbjct: 4755714 tgccggtgatggtct 4755700






 Score = 30.2 bits (15), Expect = 0.84
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 147     tggccgactgcgaca 161
               |||||||||||||||
Sbjct: 5597741 tggccgactgcgaca 5597755






 Score = 30.2 bits (15), Expect = 0.84
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 73      cgacctgccggtgat 87
               |||||||||||||||
Sbjct: 5741156 cgacctgccggtgat 5741142






 Score = 30.2 bits (15), Expect = 0.84
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 73      cgacctgccggtgat 87
               |||||||||||||||
Sbjct: 5769512 cgacctgccggtgat 5769526






 Score = 30.2 bits (15), Expect = 0.84
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 89      gtctacaacaacccg 103
               |||||||||||||||
Sbjct: 6345933 gtctacaacaacccg 6345919






 Score = 30.2 bits (15), Expect = 0.84
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 136     cctggtttccctggc 150
               |||||||||||||||
Sbjct: 6494415 cctggtttccctggc 6494429






 Score = 28.2 bits (14), Expect = 3.3
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 146    ctggccgactgcga 159
              ||||||||||||||
Sbjct: 716852 ctggccgactgcga 716839






 Score = 28.2 bits (14), Expect = 3.3
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 67     cggcaccgacctgc 80
              ||||||||||||||
Sbjct: 756295 cggcaccgacctgc 756308






 Score = 28.2 bits (14), Expect = 3.3
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 124    caccccggacatcc 137
              ||||||||||||||
Sbjct: 955443 caccccggacatcc 955456






 Score = 28.2 bits (14), Expect = 3.3
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 66     gcggcaccgacctg 79
              ||||||||||||||
Sbjct: 967753 gcggcaccgacctg 967740






 Score = 28.2 bits (14), Expect = 3.3
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 82      ggtgatggtctaca 95
               ||||||||||||||
Sbjct: 1045097 ggtgatggtctaca 1045110






 Score = 28.2 bits (14), Expect = 3.3
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 137     ctggtttccctggc 150
               ||||||||||||||
Sbjct: 1471663 ctggtttccctggc 1471650






 Score = 28.2 bits (14), Expect = 3.3
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 123     tcaccccggacatc 136
               ||||||||||||||
Sbjct: 1481823 tcaccccggacatc 1481836






 Score = 28.2 bits (14), Expect = 3.3
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 143     tccctggccgactg 156
               ||||||||||||||
Sbjct: 1859106 tccctggccgactg 1859093






 Score = 28.2 bits (14), Expect = 3.3
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 70      caccgacctgccgg 83
               ||||||||||||||
Sbjct: 2007297 caccgacctgccgg 2007284






 Score = 28.2 bits (14), Expect = 3.3
 Identities = 17/18 (94%)
 Strand = Plus / Plus

                                 
Query: 73      cgacctgccggtgatggt 90
               ||||||||||||| ||||
Sbjct: 2124505 cgacctgccggtgctggt 2124522






 Score = 28.2 bits (14), Expect = 3.3
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 67      cggcaccgacctgc 80
               ||||||||||||||
Sbjct: 2223336 cggcaccgacctgc 2223323






 Score = 28.2 bits (14), Expect = 3.3
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 87      tggtctacaacaac 100
               ||||||||||||||
Sbjct: 2350902 tggtctacaacaac 2350915






 Score = 28.2 bits (14), Expect = 3.3
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 103     gccgatctaccgga 116
               ||||||||||||||
Sbjct: 2429964 gccgatctaccgga 2429951






 Score = 28.2 bits (14), Expect = 3.3
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 67      cggcaccgacctgc 80
               ||||||||||||||
Sbjct: 2451524 cggcaccgacctgc 2451537






 Score = 28.2 bits (14), Expect = 3.3
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 67      cggcaccgacctgc 80
               ||||||||||||||
Sbjct: 2930431 cggcaccgacctgc 2930444






 Score = 28.2 bits (14), Expect = 3.3
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 72      ccgacctgccggtg 85
               ||||||||||||||
Sbjct: 2974779 ccgacctgccggtg 2974792






 Score = 28.2 bits (14), Expect = 3.3
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 73      cgacctgccggtga 86
               ||||||||||||||
Sbjct: 3010559 cgacctgccggtga 3010572






 Score = 28.2 bits (14), Expect = 3.3
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 76      cctgccggtgatgg 89
               ||||||||||||||
Sbjct: 3419931 cctgccggtgatgg 3419918






 Score = 28.2 bits (14), Expect = 3.3
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 77      ctgccggtgatggt 90
               ||||||||||||||
Sbjct: 3542043 ctgccggtgatggt 3542030






 Score = 28.2 bits (14), Expect = 3.3
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 70      caccgacctgccgg 83
               ||||||||||||||
Sbjct: 3940609 caccgacctgccgg 3940622






 Score = 28.2 bits (14), Expect = 3.3
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 67      cggcaccgacctgc 80
               ||||||||||||||
Sbjct: 3966693 cggcaccgacctgc 3966706






 Score = 28.2 bits (14), Expect = 3.3
 Identities = 17/18 (94%)
 Strand = Plus / Plus

                                 
Query: 97      caacccgccgatctaccg 114
               ||||||||||||| ||||
Sbjct: 4001804 caacccgccgatcgaccg 4001821






 Score = 28.2 bits (14), Expect = 3.3
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 132     acatcctggtttcc 145
               ||||||||||||||
Sbjct: 4104525 acatcctggtttcc 4104512






 Score = 28.2 bits (14), Expect = 3.3
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 70      caccgacctgccgg 83
               ||||||||||||||
Sbjct: 4117597 caccgacctgccgg 4117610






 Score = 28.2 bits (14), Expect = 3.3
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 77      ctgccggtgatggt 90
               ||||||||||||||
Sbjct: 4511726 ctgccggtgatggt 4511739






 Score = 28.2 bits (14), Expect = 3.3
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 73      cgacctgccggtga 86
               ||||||||||||||
Sbjct: 4809947 cgacctgccggtga 4809934






 Score = 28.2 bits (14), Expect = 3.3
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 146     ctggccgactgcga 159
               ||||||||||||||
Sbjct: 4913478 ctggccgactgcga 4913491






 Score = 28.2 bits (14), Expect = 3.3
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 72      ccgacctgccggtg 85
               ||||||||||||||
Sbjct: 5089688 ccgacctgccggtg 5089675






 Score = 28.2 bits (14), Expect = 3.3
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 78      tgccggtgatggtc 91
               ||||||||||||||
Sbjct: 5447460 tgccggtgatggtc 5447447






 Score = 28.2 bits (14), Expect = 3.3
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 145     cctggccgactgcg 158
               ||||||||||||||
Sbjct: 5495102 cctggccgactgcg 5495115






 Score = 28.2 bits (14), Expect = 3.3
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                 
Query: 70      caccgacctgccggtgat 87
               |||||| |||||||||||
Sbjct: 5634782 caccgaactgccggtgat 5634765






 Score = 28.2 bits (14), Expect = 3.3
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 78      tgccggtgatggtc 91
               ||||||||||||||
Sbjct: 5695248 tgccggtgatggtc 5695261






 Score = 28.2 bits (14), Expect = 3.3
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 66      gcggcaccgacctg 79
               ||||||||||||||
Sbjct: 6376738 gcggcaccgacctg 6376751






 Score = 28.2 bits (14), Expect = 3.3
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 66      gcggcaccgacctg 79
               ||||||||||||||
Sbjct: 6378753 gcggcaccgacctg 6378766






  Database: pa14
    Posted date:  Jan 15, 2004  3:01 PM
  Number of letters in database: 6,534,396
  Number of sequences in database:  1
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1367
Number of Sequences: 1
Number of extensions: 1367
Number of successful extensions: 54
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of query: 177
length of database: 6,534,396
effective HSP length: 15
effective length of query: 162
effective length of database: 6,534,381
effective search space: 1058569722
effective search space used: 1058569722
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)