BLAST Search Results

BLASTN 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: pa14 
           1 sequences; 6,534,396 total letters



Query= 
         (921 letters)

Distribution of 135 Blast Hits on the Query Sequence



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GCTS_68                                                           894   0.0   

>GCTS_68 
          Length = 6534396

 Score =  894 bits (451), Expect = 0.0
 Identities = 475/483 (98%)
 Strand = Plus / Minus

                                                                           
Query: 112     cctggccaacgcaaccggccatccgagccggatcatggacggttccttcgccaaccaggt 171
               ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6299084 cctgggcaacgcaaccggccatccgagccggatcatggacggttccttcgccaaccaggt 6299025

                                                                           
Query: 172     gctggcgcagatccacctgttcgagcagaagtacgccgacctgccggccgccgagaaggc 231
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6299024 gctggcgcagatccacctgttcgagcagaagtacgccgacctgccggccgccgagaaggc 6298965

                                                                           
Query: 232     caagcgcctgagcgtcgaagtgctgccgaagaagctcgacgaggaagtggccctggagat 291
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6298964 caagcgcctgagcgtcgaagtgctgccgaagaagctcgacgaggaagtggccctggagat 6298905

                                                                           
Query: 292     ggtcaagggcttcggcggcgtggtcacccagctgaccccgaaacaggccgagtacatcgg 351
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6298904 ggtcaagggcttcggcggcgtggtcacccagctgaccccgaaacaggccgagtacatcgg 6298845

                                                                           
Query: 352     cgtgagcgtggaaggcccgttcaagccggacacctatcgctactaagcggaccacggggc 411
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6298844 cgtgagcgtggaaggcccgttcaagccggacacctatcgctactaagcggaccacggggc 6298785

                                                                           
Query: 412     aggcgccatgcgcctgcaccgttcgcatgagcgctcccacgatgtccacgcacctcgccg 471
               ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6298784 aggcgccatgcgcctgccccgttcgcatgagcgctcccacgatgtccacgcacctcgccg 6298725

                                                                           
Query: 472     atcgctacaaccaggactggttgttcgccgtccgcgcccaccggaaccagaccctcagcg 531
               ||||||||||||||| |||| ||||||||| |||||||||||| ||||||||||||||||
Sbjct: 6298724 atcgctacaaccaggcctggctgttcgccgcccgcgcccaccgcaaccagaccctcagcg 6298665

                                                                           
Query: 532     gctcgccgctgccttatctggcgcacctgggcatggtcgcccacgagctgctggccgccg 591
               ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 6298664 gctcgccgctgccttatctggtgcacctgggcatggtcgccaacgagctgctggccgccg 6298605

                  
Query: 592     atc 594
               |||
Sbjct: 6298604 atc 6298602




 Score = 42.1 bits (21), Expect = 0.001
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 293     gtcaagggcttcggcggcgtg 313
               |||||||||||||||||||||
Sbjct: 4726299 gtcaagggcttcggcggcgtg 4726279




 Score = 40.1 bits (20), Expect = 0.005
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 252     tgctgccgaagaagctcgac 271
               ||||||||||||||||||||
Sbjct: 2544943 tgctgccgaagaagctcgac 2544962




 Score = 38.2 bits (19), Expect = 0.019
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 223     cgagaaggccaagcgcctg 241
               |||||||||||||||||||
Sbjct: 5435284 cgagaaggccaagcgcctg 5435266




 Score = 38.2 bits (19), Expect = 0.019
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 283     cctggagatggtcaagggc 301
               |||||||||||||||||||
Sbjct: 6371315 cctggagatggtcaagggc 6371333




 Score = 36.2 bits (18), Expect = 0.076
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 209     gacctgccggccgccgag 226
               ||||||||||||||||||
Sbjct: 1918167 gacctgccggccgccgag 1918150




 Score = 36.2 bits (18), Expect = 0.076
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                     
Query: 563     catggtcgcccacgagctgctg 584
               |||| |||||||||||||||||
Sbjct: 2074430 catgctcgcccacgagctgctg 2074409




 Score = 36.2 bits (18), Expect = 0.076
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 218     gccgccgagaaggccaag 235
               ||||||||||||||||||
Sbjct: 3083663 gccgccgagaaggccaag 3083646




 Score = 36.2 bits (18), Expect = 0.076
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 208     cgacctgccggccgccga 225
               ||||||||||||||||||
Sbjct: 6396093 cgacctgccggccgccga 6396110




 Score = 34.2 bits (17), Expect = 0.30
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                               
Query: 579    ctgctggccgccgatcc 595
              |||||||||||||||||
Sbjct: 739980 ctgctggccgccgatcc 739996




 Score = 34.2 bits (17), Expect = 0.30
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                               
Query: 569    cgcccacgagctgctgg 585
              |||||||||||||||||
Sbjct: 891536 cgcccacgagctgctgg 891552




 Score = 34.2 bits (17), Expect = 0.30
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                               
Query: 549    ctggcgcacctgggcat 565
              |||||||||||||||||
Sbjct: 915661 ctggcgcacctgggcat 915677




 Score = 34.2 bits (17), Expect = 0.30
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                               
Query: 205    cgccgacctgccggccg 221
              |||||||||||||||||
Sbjct: 918160 cgccgacctgccggccg 918176




 Score = 34.2 bits (17), Expect = 0.30
 Identities = 20/21 (95%)
 Strand = Plus / Minus

                                    
Query: 204     acgccgacctgccggccgccg 224
               ||||||||||||||| |||||
Sbjct: 2482352 acgccgacctgccggtcgccg 2482332




 Score = 34.2 bits (17), Expect = 0.30
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 575     cgagctgctggccgccg 591
               |||||||||||||||||
Sbjct: 2908657 cgagctgctggccgccg 2908673




 Score = 34.2 bits (17), Expect = 0.30
 Identities = 20/21 (95%)
 Strand = Plus / Minus

                                    
Query: 287     gagatggtcaagggcttcggc 307
               |||| ||||||||||||||||
Sbjct: 3443253 gagacggtcaagggcttcggc 3443233




 Score = 34.2 bits (17), Expect = 0.30
 Identities = 20/21 (95%)
 Strand = Plus / Plus

                                    
Query: 565     tggtcgcccacgagctgctgg 585
               ||||||||| |||||||||||
Sbjct: 3918332 tggtcgcccgcgagctgctgg 3918352




 Score = 34.2 bits (17), Expect = 0.30
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 528     agcggctcgccgctgcc 544
               |||||||||||||||||
Sbjct: 4222252 agcggctcgccgctgcc 4222268




 Score = 34.2 bits (17), Expect = 0.30
 Identities = 23/25 (92%)
 Strand = Plus / Plus

                                        
Query: 265     gctcgacgaggaagtggccctggag 289
               |||||||||||| | ||||||||||
Sbjct: 5491174 gctcgacgaggacgaggccctggag 5491198




 Score = 34.2 bits (17), Expect = 0.30
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 203     tacgccgacctgccggc 219
               |||||||||||||||||
Sbjct: 6020086 tacgccgacctgccggc 6020102




 Score = 34.2 bits (17), Expect = 0.30
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 493     tgttcgccgtccgcgcc 509
               |||||||||||||||||
Sbjct: 6069758 tgttcgccgtccgcgcc 6069742




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                              
Query: 208    cgacctgccggccgcc 223
              ||||||||||||||||
Sbjct: 191511 cgacctgccggccgcc 191526




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                              
Query: 205    cgccgacctgccggcc 220
              ||||||||||||||||
Sbjct: 282696 cgccgacctgccggcc 282711




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                              
Query: 575    cgagctgctggccgcc 590
              ||||||||||||||||
Sbjct: 542178 cgagctgctggccgcc 542163




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                              
Query: 104    tcggccagcctggcca 119
              ||||||||||||||||
Sbjct: 767935 tcggccagcctggcca 767920




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                              
Query: 567    gtcgcccacgagctgc 582
              ||||||||||||||||
Sbjct: 878278 gtcgcccacgagctgc 878293




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 529     gcggctcgccgctgcc 544
               ||||||||||||||||
Sbjct: 1482567 gcggctcgccgctgcc 1482582




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 524     cctcagcggctcgccg 539
               ||||||||||||||||
Sbjct: 1584523 cctcagcggctcgccg 1584508




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 552     gcgcacctgggcatgg 567
               ||||||||||||||||
Sbjct: 1760892 gcgcacctgggcatgg 1760907




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 204     acgccgacctgccggc 219
               ||||||||||||||||
Sbjct: 1849646 acgccgacctgccggc 1849661




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 527     cagcggctcgccgctg 542
               ||||||||||||||||
Sbjct: 1857455 cagcggctcgccgctg 1857470




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 156     ccttcgccaaccaggt 171
               ||||||||||||||||
Sbjct: 1880012 ccttcgccaaccaggt 1880027




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 527     cagcggctcgccgctg 542
               ||||||||||||||||
Sbjct: 2012084 cagcggctcgccgctg 2012069




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 214     gccggccgccgagaag 229
               ||||||||||||||||
Sbjct: 2013477 gccggccgccgagaag 2013462




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 461     gcacctcgccgatcgc 476
               ||||||||||||||||
Sbjct: 2357947 gcacctcgccgatcgc 2357932




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 106     ggccagcctggccaac 121
               ||||||||||||||||
Sbjct: 2567279 ggccagcctggccaac 2567294




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 553     cgcacctgggcatggt 568
               ||||||||||||||||
Sbjct: 2599612 cgcacctgggcatggt 2599627




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 98      ggatgatcggccagcc 113
               ||||||||||||||||
Sbjct: 3007643 ggatgatcggccagcc 3007658




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 255     tgccgaagaagctcga 270
               ||||||||||||||||
Sbjct: 3292061 tgccgaagaagctcga 3292046




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 22/24 (91%)
 Strand = Plus / Minus

                                       
Query: 568     tcgcccacgagctgctggccgccg 591
               ||||| ||| ||||||||||||||
Sbjct: 3813729 tcgccgacgcgctgctggccgccg 3813706




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 163     caaccaggtgctggcg 178
               ||||||||||||||||
Sbjct: 3874369 caaccaggtgctggcg 3874384




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 106     ggccagcctggccaac 121
               ||||||||||||||||
Sbjct: 3970142 ggccagcctggccaac 3970157




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 552     gcgcacctgggcatgg 567
               ||||||||||||||||
Sbjct: 4472377 gcgcacctgggcatgg 4472362




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 582     ctggccgccgatccttactg 601
               |||||||||||||| |||||
Sbjct: 4662950 ctggccgccgatccctactg 4662969




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 338     gccgagtacatcggcg 353
               ||||||||||||||||
Sbjct: 4862159 gccgagtacatcggcg 4862174




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 199     gaagtacgccgacctg 214
               ||||||||||||||||
Sbjct: 5226350 gaagtacgccgacctg 5226365




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 295     caagggcttcggcggc 310
               ||||||||||||||||
Sbjct: 5363626 caagggcttcggcggc 5363641




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 278     gtggccctggagatgg 293
               ||||||||||||||||
Sbjct: 5563447 gtggccctggagatgg 5563462




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 191     ttcgagcagaagtacg 206
               ||||||||||||||||
Sbjct: 5575473 ttcgagcagaagtacg 5575458




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 274     ggaagtggccctggag 289
               ||||||||||||||||
Sbjct: 5726645 ggaagtggccctggag 5726630




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 530     cggctcgccgctgcct 545
               ||||||||||||||||
Sbjct: 6092442 cggctcgccgctgcct 6092427




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 447     cccacgatgtccacgc 462
               ||||||||||||||||
Sbjct: 6317401 cccacgatgtccacgc 6317386




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 205     cgccgacctgccggcc 220
               ||||||||||||||||
Sbjct: 6372665 cgccgacctgccggcc 6372680




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                            
Query: 205   cgccgacctgccggc 219
             |||||||||||||||
Sbjct: 55120 cgccgacctgccggc 55106




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 530    cggctcgccgctgcc 544
              |||||||||||||||
Sbjct: 383271 cggctcgccgctgcc 383285




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 217    ggccgccgagaaggc 231
              |||||||||||||||
Sbjct: 406613 ggccgccgagaaggc 406627




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 309    gcgtggtcacccagc 323
              |||||||||||||||
Sbjct: 435503 gcgtggtcacccagc 435517




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 581    gctggccgccgatcc 595
              |||||||||||||||
Sbjct: 534447 gctggccgccgatcc 534461




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 549    ctggcgcacctgggc 563
              |||||||||||||||
Sbjct: 696561 ctggcgcacctgggc 696547




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 578    gctgctggccgccga 592
              |||||||||||||||
Sbjct: 726532 gctgctggccgccga 726546




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                 
Query: 204    acgccgacctgccggccgc 222
              ||||||| |||||||||||
Sbjct: 746548 acgccgagctgccggccgc 746566




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 106    ggccagcctggccaa 120
              |||||||||||||||
Sbjct: 768278 ggccagcctggccaa 768264




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                 
Query: 220    cgccgagaaggccaagcgc 238
              ||||||||||||| |||||
Sbjct: 778844 cgccgagaaggccgagcgc 778862




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 235    gcgcctgagcgtcga 249
              |||||||||||||||
Sbjct: 864391 gcgcctgagcgtcga 864405




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 167    caggtgctggcgcag 181
              |||||||||||||||
Sbjct: 919527 caggtgctggcgcag 919541




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 782    ctatttccagaccct 796
              |||||||||||||||
Sbjct: 936681 ctatttccagaccct 936667




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 333     aacaggccgagtaca 347
               |||||||||||||||
Sbjct: 1065068 aacaggccgagtaca 1065054




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 525     ctcagcggctcgccg 539
               |||||||||||||||
Sbjct: 1172024 ctcagcggctcgccg 1172038




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 105     cggccagcctggcca 119
               |||||||||||||||
Sbjct: 1214542 cggccagcctggcca 1214556




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 284     ctggagatggtcaag 298
               |||||||||||||||
Sbjct: 1339276 ctggagatggtcaag 1339262




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 336     aggccgagtacatcg 350
               |||||||||||||||
Sbjct: 1429546 aggccgagtacatcg 1429560




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 211     cctgccggccgccga 225
               |||||||||||||||
Sbjct: 1498537 cctgccggccgccga 1498551




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 107     gccagcctggccaac 121
               |||||||||||||||
Sbjct: 1665567 gccagcctggccaac 1665581




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 282     ccctggagatggtca 296
               |||||||||||||||
Sbjct: 1679610 ccctggagatggtca 1679624




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 551     ggcgcacctgggcat 565
               |||||||||||||||
Sbjct: 1752541 ggcgcacctgggcat 1752527




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 299     ggcttcggcggcgtg 313
               |||||||||||||||
Sbjct: 1877122 ggcttcggcggcgtg 1877136




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 259     gaagaagctcgacga 273
               |||||||||||||||
Sbjct: 1916972 gaagaagctcgacga 1916958




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 576     gagctgctggccgcc 590
               |||||||||||||||
Sbjct: 2092102 gagctgctggccgcc 2092088




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 109     cagcctggccaacgc 123
               |||||||||||||||
Sbjct: 2095754 cagcctggccaacgc 2095740




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 205     cgccgacctgccggc 219
               |||||||||||||||
Sbjct: 2164725 cgccgacctgccggc 2164711




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 206     gccgacctgccggcc 220
               |||||||||||||||
Sbjct: 2347767 gccgacctgccggcc 2347781




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 551     ggcgcacctgggcatggtc 569
               ||||||||||||| |||||
Sbjct: 2643488 ggcgcacctgggcctggtc 2643506




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 171     tgctggcgcagatcc 185
               |||||||||||||||
Sbjct: 2699600 tgctggcgcagatcc 2699586




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 581     gctggccgccgatcc 595
               |||||||||||||||
Sbjct: 2741608 gctggccgccgatcc 2741594




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 530     cggctcgccgctgcc 544
               |||||||||||||||
Sbjct: 2846371 cggctcgccgctgcc 2846357




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 526     tcagcggctcgccgctgcc 544
               |||| ||||||||||||||
Sbjct: 2971561 tcagtggctcgccgctgcc 2971579




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 549     ctggcgcacctgggc 563
               |||||||||||||||
Sbjct: 2986220 ctggcgcacctgggc 2986206




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 165     accaggtgctggcgc 179
               |||||||||||||||
Sbjct: 3169136 accaggtgctggcgc 3169150




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 579     ctgctggccgccgat 593
               |||||||||||||||
Sbjct: 3173788 ctgctggccgccgat 3173802




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 487     actggttgttcgccg 501
               |||||||||||||||
Sbjct: 3239661 actggttgttcgccg 3239675




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 537     ccgctgccttatctggcgc 555
               ||||||||||||| |||||
Sbjct: 3252140 ccgctgccttatcgggcgc 3252122




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 163     caaccaggtgctggcgcag 181
               ||||| |||||||||||||
Sbjct: 3260940 caaccgggtgctggcgcag 3260922




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 298     gggcttcggcggcgt 312
               |||||||||||||||
Sbjct: 3263509 gggcttcggcggcgt 3263495




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 165     accaggtgctggcgc 179
               |||||||||||||||
Sbjct: 3304721 accaggtgctggcgc 3304707




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 495     ttcgccgtccgcgcc 509
               |||||||||||||||
Sbjct: 3327952 ttcgccgtccgcgcc 3327966




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 308     ggcgtggtcacccag 322
               |||||||||||||||
Sbjct: 3338070 ggcgtggtcacccag 3338056




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 297     agggcttcggcggcg 311
               |||||||||||||||
Sbjct: 3434554 agggcttcggcggcg 3434568




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 245     gtcgaagtgctgccg 259
               |||||||||||||||
Sbjct: 3546557 gtcgaagtgctgccg 3546543




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 301     cttcggcggcgtggt 315
               |||||||||||||||
Sbjct: 3565592 cttcggcggcgtggt 3565578




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 298     gggcttcggcggcgt 312
               |||||||||||||||
Sbjct: 3610263 gggcttcggcggcgt 3610249




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 201     agtacgccgacctgc 215
               |||||||||||||||
Sbjct: 3653440 agtacgccgacctgc 3653426




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 206     gccgacctgccggccgccg 224
               |||| ||||||||||||||
Sbjct: 3915284 gccggcctgccggccgccg 3915266




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 208     cgacctgccggccgc 222
               |||||||||||||||
Sbjct: 3924125 cgacctgccggccgc 3924139




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 578     gctgctggccgccga 592
               |||||||||||||||
Sbjct: 4083374 gctgctggccgccga 4083388




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 185     cacctgttcgagcag 199
               |||||||||||||||
Sbjct: 4121086 cacctgttcgagcag 4121100




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 264     agctcgacgaggaag 278
               |||||||||||||||
Sbjct: 4228417 agctcgacgaggaag 4228431




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 577     agctgctggccgccg 591
               |||||||||||||||
Sbjct: 4292434 agctgctggccgccg 4292420




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 184     ccacctgttcgagca 198
               |||||||||||||||
Sbjct: 4769886 ccacctgttcgagca 4769872




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 302     ttcggcggcgtggtc 316
               |||||||||||||||
Sbjct: 4834144 ttcggcggcgtggtc 4834158




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 298     gggcttcggcggcgt 312
               |||||||||||||||
Sbjct: 4935317 gggcttcggcggcgt 4935331




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 318     cccagctgaccccga 332
               |||||||||||||||
Sbjct: 5187287 cccagctgaccccga 5187273




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 473     tcgctacaaccagga 487
               |||||||||||||||
Sbjct: 5221220 tcgctacaaccagga 5221206




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 411     caggcgccatgcgcc 425
               |||||||||||||||
Sbjct: 5233212 caggcgccatgcgcc 5233198




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 212     ctgccggccgccgag 226
               |||||||||||||||
Sbjct: 5276866 ctgccggccgccgag 5276852




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 458     cacgcacctcgccga 472
               |||||||||||||||
Sbjct: 5282877 cacgcacctcgccga 5282891




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 415     cgccatgcgcctgca 429
               |||||||||||||||
Sbjct: 5296517 cgccatgcgcctgca 5296503




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 171     tgctggcgcagatcc 185
               |||||||||||||||
Sbjct: 5309511 tgctggcgcagatcc 5309525




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 497     cgccgtccgcgccca 511
               |||||||||||||||
Sbjct: 5320686 cgccgtccgcgccca 5320672




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 204     acgccgacctgccgg 218
               |||||||||||||||
Sbjct: 5351657 acgccgacctgccgg 5351671




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 212     ctgccggccgccgag 226
               |||||||||||||||
Sbjct: 5408057 ctgccggccgccgag 5408043




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 549     ctggcgcacctgggc 563
               |||||||||||||||
Sbjct: 5426509 ctggcgcacctgggc 5426523




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 457     ccacgcacctcgccg 471
               |||||||||||||||
Sbjct: 5515869 ccacgcacctcgccg 5515883




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 579     ctgctggccgccgat 593
               |||||||||||||||
Sbjct: 5515918 ctgctggccgccgat 5515904




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 582     ctggccgccgatcct 596
               |||||||||||||||
Sbjct: 5659644 ctggccgccgatcct 5659630




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 268     cgacgaggaagtggc 282
               |||||||||||||||
Sbjct: 5762685 cgacgaggaagtggc 5762671




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 138     gccggatcatggacg 152
               |||||||||||||||
Sbjct: 5786349 gccggatcatggacg 5786335




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 109     cagcctggccaacgc 123
               |||||||||||||||
Sbjct: 5849484 cagcctggccaacgc 5849498




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 205     cgccgacctgccggccgcc 223
               ||||||||||| |||||||
Sbjct: 6031194 cgccgacctgctggccgcc 6031212




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 110     agcctggccaacgca 124
               |||||||||||||||
Sbjct: 6153836 agcctggccaacgca 6153822




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 302     ttcggcggcgtggtc 316
               |||||||||||||||
Sbjct: 6161830 ttcggcggcgtggtc 6161844




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 167     caggtgctggcgcag 181
               |||||||||||||||
Sbjct: 6164656 caggtgctggcgcag 6164642




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 165     accaggtgctggcgc 179
               |||||||||||||||
Sbjct: 6227870 accaggtgctggcgc 6227884




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 460     cgcacctcgccgatc 474
               |||||||||||||||
Sbjct: 6254476 cgcacctcgccgatc 6254462




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 578     gctgctggccgccga 592
               |||||||||||||||
Sbjct: 6423092 gctgctggccgccga 6423106




 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 260     aagaagctcgacgag 274
               |||||||||||||||
Sbjct: 6480709 aagaagctcgacgag 6480723




  Database: pa14
    Posted date:  Jan 15, 2004  3:01 PM
  Number of letters in database: 6,534,396
  Number of sequences in database:  1
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9663
Number of Sequences: 1
Number of extensions: 9663
Number of successful extensions: 135
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 135
length of query: 921
length of database: 6,534,396
effective HSP length: 16
effective length of query: 905
effective length of database: 6,534,380
effective search space: 5913613900
effective search space used: 5913613900
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)