BLAST Search Results

BLASTN 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: pa14 
           1 sequences; 6,534,396 total letters



Query= 
         (934 letters)

Distribution of 142 Blast Hits on the Query Sequence



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GCTS_68                                                           807   0.0   

>GCTS_68 
          Length = 6534396

 Score =  807 bits (407), Expect = 0.0
 Identities = 433/442 (97%)
 Strand = Plus / Plus

                                                                          
Query: 121    ccttgntggtcgcctggatcgccgagctgatcgtgtattcgctggcctcgctgttcggct 180
              ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738464 ccttgctggtcgcctggatcgccgagctgatcgtgtattcgctggcctcgctgttcggct 738523

                                                                          
Query: 181    tcggcgaagaccgccgcacccgcgagcgtcactggagctgacggcgcgactcaggccgcc 240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738524 tcggcgaagaccgccgcacccgcgagcgtcactggagctgacggcgcgactcaggccgcc 738583

                                                                          
Query: 241    gccagttccaggaacgccctgatcacccgcaggccgcggcgcttctccaggcagccgatc 300
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738584 gccagttccaggaacgccctgatcacccgcaggccgcggcgcttctccaggcagccgatc 738643

                                                                          
Query: 301    aggtggcagttggtcagctcgggaccgaccagcggcaccgcgcgaacccgcggatcgttg 360
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738644 aggtggcagttggtcagctcgggaccgaccagcggcaccgcgcgaacccgcggatcgttg 738703

                                                                          
Query: 361    ccgacctccagggaagacaccacgccgacgcccagttcggcggccaccgcttcggtcacc 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738704 ccgacctccagggaagacaccacgccgacgcccagttcggcggccaccgcttcggtcacc 738763

                                                                          
Query: 421    gcttctcggctgtccagctccagcagcacccgcgtctgcccgccctggctggcgcaagtg 480
              ||||| |||||||||||||||||||||||||||| |||| |||||||||||||||| | |
Sbjct: 738764 gcttcccggctgtccagctccagcagcacccgcggctgcacgccctggctggcgcaggcg 738823

                                                                          
Query: 481    cggtcgaaggtgcggcgggtgatcgatccgggttcgcacagcaccatgatctgctgggcg 540
              |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||
Sbjct: 738824 cggtcgaaggtgcggcgggtgatcgagccgggttcgcgcagcaccatgatctgctggtcg 738883

                                    
Query: 541    agttcttccagcggtacgcctt 562
              ||||||||||||||||||||||
Sbjct: 738884 agttcttccagcggtacgcctt 738905




 Score = 60.0 bits (30), Expect = 5e-09
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                             
Query: 49      atcaggaagccgaagaagaaggcgaacacc 78
               ||||||||||||||||||||||||||||||
Sbjct: 3841575 atcaggaagccgaagaagaaggcgaacacc 3841604




 Score = 40.1 bits (20), Expect = 0.005
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 54     gaagccgaagaagaaggcgaacac 77
              ||||||||||| ||||||||||||
Sbjct: 750169 gaagccgaagacgaaggcgaacac 750146




 Score = 36.2 bits (18), Expect = 0.077
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 272    ggccgcggcgcttctcca 289
              ||||||||||||||||||
Sbjct: 973303 ggccgcggcgcttctcca 973286




 Score = 36.2 bits (18), Expect = 0.077
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 199    cccgcgagcgtcactgga 216
              ||||||||||||||||||
Sbjct: 989497 cccgcgagcgtcactgga 989480




 Score = 36.2 bits (18), Expect = 0.077
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                     
Query: 388     acgcccagttcggcggccaccg 409
               |||||||| |||||||||||||
Sbjct: 1323438 acgcccagctcggcggccaccg 1323459




 Score = 36.2 bits (18), Expect = 0.077
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 169     cgctgttcggcttcggcg 186
               ||||||||||||||||||
Sbjct: 2460687 cgctgttcggcttcggcg 2460670




 Score = 36.2 bits (18), Expect = 0.077
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 222     cggcgcgactcaggccgc 239
               ||||||||||||||||||
Sbjct: 4300487 cggcgcgactcaggccgc 4300504




 Score = 36.2 bits (18), Expect = 0.077
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 55      aagccgaagaagaaggcg 72
               ||||||||||||||||||
Sbjct: 5553268 aagccgaagaagaaggcg 5553251




 Score = 34.2 bits (17), Expect = 0.31
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 386     cgacgcccagttcggcg 402
               |||||||||||||||||
Sbjct: 1859800 cgacgcccagttcggcg 1859816




 Score = 34.2 bits (17), Expect = 0.31
 Identities = 20/21 (95%)
 Strand = Plus / Plus

                                    
Query: 432     gtccagctccagcagcacccg 452
               ||||||| |||||||||||||
Sbjct: 4307964 gtccagcgccagcagcacccg 4307984




 Score = 34.2 bits (17), Expect = 0.31
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 222     cggcgcgactcaggccg 238
               |||||||||||||||||
Sbjct: 5365636 cggcgcgactcaggccg 5365620




 Score = 34.2 bits (17), Expect = 0.31
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 73      aacaccgcgtcataccc 89
               |||||||||||||||||
Sbjct: 6080592 aacaccgcgtcataccc 6080576




 Score = 34.2 bits (17), Expect = 0.31
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 432     gtccagctccagcagca 448
               |||||||||||||||||
Sbjct: 6175221 gtccagctccagcagca 6175205




 Score = 34.2 bits (17), Expect = 0.31
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 171     ctgttcggcttcggcga 187
               |||||||||||||||||
Sbjct: 6412406 ctgttcggcttcggcga 6412422




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                             
Query: 140   cgccgagctgatcgtg 155
             ||||||||||||||||
Sbjct: 25703 cgccgagctgatcgtg 25718




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                              
Query: 390    gcccagttcggcggcc 405
              ||||||||||||||||
Sbjct: 324757 gcccagttcggcggcc 324742




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                  
Query: 273    gccgcggcgcttctccaggc 292
              |||| |||||||||||||||
Sbjct: 540772 gccgaggcgcttctccaggc 540753




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                              
Query: 171    ctgttcggcttcggcg 186
              ||||||||||||||||
Sbjct: 671899 ctgttcggcttcggcg 671914




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                              
Query: 349    cgcggatcgttgccga 364
              ||||||||||||||||
Sbjct: 702510 cgcggatcgttgccga 702495




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 386     cgacgcccagttcggc 401
               ||||||||||||||||
Sbjct: 1195915 cgacgcccagttcggc 1195900




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 390     gcccagttcggcggcc 405
               ||||||||||||||||
Sbjct: 1658817 gcccagttcggcggcc 1658802




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 438     ctccagcagcacccgc 453
               ||||||||||||||||
Sbjct: 2033034 ctccagcagcacccgc 2033049




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 70      gcgaacaccgcgtcat 85
               ||||||||||||||||
Sbjct: 2269594 gcgaacaccgcgtcat 2269579




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 323     gaccgaccagcggcac 338
               ||||||||||||||||
Sbjct: 2866766 gaccgaccagcggcac 2866781




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 286     tccaggcagccgatca 301
               ||||||||||||||||
Sbjct: 2981454 tccaggcagccgatca 2981439




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 389     cgcccagttcggcggc 404
               ||||||||||||||||
Sbjct: 3065753 cgcccagttcggcggc 3065768




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 59      cgaagaagaaggcgaa 74
               ||||||||||||||||
Sbjct: 3096418 cgaagaagaaggcgaa 3096433




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 140     cgccgagctgatcgtg 155
               ||||||||||||||||
Sbjct: 3184779 cgccgagctgatcgtg 3184764




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 382     acgccgacgcccagttcggc 401
               |||||||||||||| |||||
Sbjct: 3363008 acgccgacgcccaggtcggc 3363027




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 431     tgtccagctccagcag 446
               ||||||||||||||||
Sbjct: 3440130 tgtccagctccagcag 3440115




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 273     gccgcggcgcttctcc 288
               ||||||||||||||||
Sbjct: 3451028 gccgcggcgcttctcc 3451013




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 715     ggatcaggcgcccctg 730
               ||||||||||||||||
Sbjct: 3696866 ggatcaggcgcccctg 3696881




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 287     ccaggcagccgatcag 302
               ||||||||||||||||
Sbjct: 3713413 ccaggcagccgatcag 3713428




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 428     ggctgtccagctccag 443
               ||||||||||||||||
Sbjct: 3968898 ggctgtccagctccag 3968883




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 386     cgacgcccagttcggc 401
               ||||||||||||||||
Sbjct: 4167470 cgacgcccagttcggc 4167485




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 547     tccagcggtacgcctttctc 566
               |||||||||||||| |||||
Sbjct: 4390809 tccagcggtacgccgttctc 4390828




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 435     cagctccagcagcacc 450
               ||||||||||||||||
Sbjct: 4815137 cagctccagcagcacc 4815152




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 193     gccgcacccgcgagcg 208
               ||||||||||||||||
Sbjct: 5007429 gccgcacccgcgagcg 5007414




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 264     cacccgcaggccgcggcgct 283
               |||| |||||||||||||||
Sbjct: 5110501 caccagcaggccgcggcgct 5110520




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                   
Query: 130     tcgcctggatcgccgagctg 149
               ||||||||||||||| ||||
Sbjct: 5627190 tcgcctggatcgccgtgctg 5627171




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 261     gatcacccgcaggccg 276
               ||||||||||||||||
Sbjct: 5906773 gatcacccgcaggccg 5906758




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 134     ctggatcgccgagctg 149
               ||||||||||||||||
Sbjct: 6028175 ctggatcgccgagctg 6028190




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 454     gtctgcccgccctggc 469
               ||||||||||||||||
Sbjct: 6166291 gtctgcccgccctggc 6166276




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 177     ggcttcggcgaagacc 192
               ||||||||||||||||
Sbjct: 6184042 ggcttcggcgaagacc 6184057




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 236     ccgccgccagttccag 251
               ||||||||||||||||
Sbjct: 6279083 ccgccgccagttccag 6279068




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 435     cagctccagcagcacc 450
               ||||||||||||||||
Sbjct: 6348411 cagctccagcagcacc 6348396




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                   
Query: 154     tgtattcgctggcctcgctg 173
               ||||||||||||| ||||||
Sbjct: 6511581 tgtattcgctggcgtcgctg 6511562




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 140     cgccgagctgatcgtg 155
               ||||||||||||||||
Sbjct: 6517286 cgccgagctgatcgtg 6517301




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 449    cccgcgtctgcccgc 463
              |||||||||||||||
Sbjct: 102069 cccgcgtctgcccgc 102055




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 239    ccgccagttccagga 253
              |||||||||||||||
Sbjct: 148593 ccgccagttccagga 148579




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 376    gacaccacgccgacg 390
              |||||||||||||||
Sbjct: 232169 gacaccacgccgacg 232183




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 330    cagcggcaccgcgcg 344
              |||||||||||||||
Sbjct: 283674 cagcggcaccgcgcg 283660




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 392    ccagttcggcggcca 406
              |||||||||||||||
Sbjct: 284433 ccagttcggcggcca 284447




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 175    tcggcttcggcgaag 189
              |||||||||||||||
Sbjct: 482782 tcggcttcggcgaag 482768




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                 
Query: 288    caggcagccgatcaggtgg 306
              ||||| |||||||||||||
Sbjct: 519714 caggcggccgatcaggtgg 519696




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 288    caggcagccgatcag 302
              |||||||||||||||
Sbjct: 585421 caggcagccgatcag 585407




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 136    ggatcgccgagctga 150
              |||||||||||||||
Sbjct: 596004 ggatcgccgagctga 596018




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 379    accacgccgacgccc 393
              |||||||||||||||
Sbjct: 639290 accacgccgacgccc 639276




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                 
Query: 427    cggctgtccagctccagca 445
              |||||||||||| ||||||
Sbjct: 696655 cggctgtccagcaccagca 696673




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 440    ccagcagcacccgcg 454
              |||||||||||||||
Sbjct: 867326 ccagcagcacccgcg 867312




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 133    cctggatcgccgagc 147
              |||||||||||||||
Sbjct: 917948 cctggatcgccgagc 917934




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 273     gccgcggcgcttctc 287
               |||||||||||||||
Sbjct: 1016832 gccgcggcgcttctc 1016818




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 139     tcgccgagctgatcg 153
               |||||||||||||||
Sbjct: 1576529 tcgccgagctgatcg 1576543




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 161     gctggcctcgctgttcggc 179
               ||||||||||||| |||||
Sbjct: 1739305 gctggcctcgctggtcggc 1739323




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 139     tcgccgagctgatcg 153
               |||||||||||||||
Sbjct: 1798845 tcgccgagctgatcg 1798859




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 262     atcacccgcaggccg 276
               |||||||||||||||
Sbjct: 1801656 atcacccgcaggccg 1801642




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 397     tcggcggccaccgct 411
               |||||||||||||||
Sbjct: 1903321 tcggcggccaccgct 1903307




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 392     ccagttcggcggccaccgc 410
               ||||||||||||| |||||
Sbjct: 1907789 ccagttcggcggcgaccgc 1907807




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 392     ccagttcggcggcca 406
               |||||||||||||||
Sbjct: 1931602 ccagttcggcggcca 1931588




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 455     tctgcccgccctggc 469
               |||||||||||||||
Sbjct: 1942508 tctgcccgccctggc 1942522




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 434     ccagctccagcagca 448
               |||||||||||||||
Sbjct: 2059710 ccagctccagcagca 2059724




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 258     cctgatcacccgcag 272
               |||||||||||||||
Sbjct: 2104769 cctgatcacccgcag 2104755




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 222     cggcgcgactcaggc 236
               |||||||||||||||
Sbjct: 2111913 cggcgcgactcaggc 2111927




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 131     cgcctggatcgccga 145
               |||||||||||||||
Sbjct: 2121193 cgcctggatcgccga 2121179




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 162     ctggcctcgctgttc 176
               |||||||||||||||
Sbjct: 2225254 ctggcctcgctgttc 2225268




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 223     ggcgcgactcaggcc 237
               |||||||||||||||
Sbjct: 2370869 ggcgcgactcaggcc 2370883




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 130     tcgcctggatcgccg 144
               |||||||||||||||
Sbjct: 2493316 tcgcctggatcgccg 2493330




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 130     tcgcctggatcgccg 144
               |||||||||||||||
Sbjct: 2493493 tcgcctggatcgccg 2493507




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 615     tgcgccgaattcctc 629
               |||||||||||||||
Sbjct: 2539576 tgcgccgaattcctc 2539562




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 379     accacgccgacgccc 393
               |||||||||||||||
Sbjct: 2579780 accacgccgacgccc 2579794




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 657     ggacgccgccctcgg 671
               |||||||||||||||
Sbjct: 2683250 ggacgccgccctcgg 2683236




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 491     tgcggcgggtgatcg 505
               |||||||||||||||
Sbjct: 2865085 tgcggcgggtgatcg 2865071




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 261     gatcacccgcaggccgcgg 279
               |||| ||||||||||||||
Sbjct: 2868101 gatcgcccgcaggccgcgg 2868119




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 266     cccgcaggccgcggc 280
               |||||||||||||||
Sbjct: 2883444 cccgcaggccgcggc 2883430




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 396     ttcggcggccaccgc 410
               |||||||||||||||
Sbjct: 2961290 ttcggcggccaccgc 2961304




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 392     ccagttcggcggcca 406
               |||||||||||||||
Sbjct: 3038145 ccagttcggcggcca 3038131




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 235     gccgccgccagttcc 249
               |||||||||||||||
Sbjct: 3065215 gccgccgccagttcc 3065229




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 139     tcgccgagctgatcg 153
               |||||||||||||||
Sbjct: 3085343 tcgccgagctgatcg 3085329




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 330     cagcggcaccgcgcg 344
               |||||||||||||||
Sbjct: 3100596 cagcggcaccgcgcg 3100582




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 490     gtgcggcgggtgatc 504
               |||||||||||||||
Sbjct: 3196233 gtgcggcgggtgatc 3196219




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 489     ggtgcggcgggtgat 503
               |||||||||||||||
Sbjct: 3203350 ggtgcggcgggtgat 3203336




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 432     gtccagctccagcagcacc 450
               ||||| |||||||||||||
Sbjct: 3226325 gtccatctccagcagcacc 3226343




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 734     ggtttccagggggttttcc 752
               ||||||||||| |||||||
Sbjct: 3264889 ggtttccagggcgttttcc 3264907




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 438     ctccagcagcacccg 452
               |||||||||||||||
Sbjct: 3282500 ctccagcagcacccg 3282486




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 131     cgcctggatcgccga 145
               |||||||||||||||
Sbjct: 3308969 cgcctggatcgccga 3308983




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 659     acgccgccctcggaa 673
               |||||||||||||||
Sbjct: 3347116 acgccgccctcggaa 3347130




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 132     gcctggatcgccgag 146
               |||||||||||||||
Sbjct: 3605880 gcctggatcgccgag 3605866




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 433     tccagctccagcagc 447
               |||||||||||||||
Sbjct: 3607690 tccagctccagcagc 3607676




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 498     ggtgatcgatccggg 512
               |||||||||||||||
Sbjct: 3609050 ggtgatcgatccggg 3609064




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 406     accgcttcggtcacc 420
               |||||||||||||||
Sbjct: 3629567 accgcttcggtcacc 3629553




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 138     atcgccgagctgatc 152
               |||||||||||||||
Sbjct: 3748752 atcgccgagctgatc 3748738




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 52      aggaagccgaagaag 66
               |||||||||||||||
Sbjct: 3770753 aggaagccgaagaag 3770767




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 384     gccgacgcccagttcggcg 402
               |||| ||||||||||||||
Sbjct: 3880090 gccgtcgcccagttcggcg 3880108




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 59      cgaagaagaaggcga 73
               |||||||||||||||
Sbjct: 3893195 cgaagaagaaggcga 3893181




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 168     tcgctgttcggcttcggcg 186
               |||||||||||| ||||||
Sbjct: 3932106 tcgctgttcggcgtcggcg 3932124




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 278     ggcgcttctccaggc 292
               |||||||||||||||
Sbjct: 4021716 ggcgcttctccaggc 4021702




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 461     cgccctggctggcgc 475
               |||||||||||||||
Sbjct: 4043462 cgccctggctggcgc 4043448




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 264     cacccgcaggccgcg 278
               |||||||||||||||
Sbjct: 4088518 cacccgcaggccgcg 4088504




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 267     ccgcaggccgcggcg 281
               |||||||||||||||
Sbjct: 4128017 ccgcaggccgcggcg 4128003




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 384     gccgacgcccagttcggcg 402
               ||||| |||||||||||||
Sbjct: 4147607 gccgaggcccagttcggcg 4147589




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 498     ggtgatcgatccggg 512
               |||||||||||||||
Sbjct: 4203163 ggtgatcgatccggg 4203149




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 392     ccagttcggcggcca 406
               |||||||||||||||
Sbjct: 4315351 ccagttcggcggcca 4315337




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 439     tccagcagcacccgc 453
               |||||||||||||||
Sbjct: 4319102 tccagcagcacccgc 4319116




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 344     gaacccgcggatcgt 358
               |||||||||||||||
Sbjct: 4351688 gaacccgcggatcgt 4351702




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 131     cgcctggatcgccga 145
               |||||||||||||||
Sbjct: 4412839 cgcctggatcgccga 4412825




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 156     tattcgctggcctcg 170
               |||||||||||||||
Sbjct: 4485447 tattcgctggcctcg 4485433




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 657     ggacgccgccctcgg 671
               |||||||||||||||
Sbjct: 4536720 ggacgccgccctcgg 4536706




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 392     ccagttcggcggcca 406
               |||||||||||||||
Sbjct: 4741498 ccagttcggcggcca 4741484




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 21/23 (91%)
 Strand = Plus / Plus

                                      
Query: 428     ggctgtccagctccagcagcacc 450
               |||||| |||| |||||||||||
Sbjct: 4929694 ggctgttcagcgccagcagcacc 4929716




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 220     gacggcgcgactcaggccg 238
               ||||||||||| |||||||
Sbjct: 5034707 gacggcgcgacccaggccg 5034725




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 758     cctccgcttgacggg 772
               |||||||||||||||
Sbjct: 5052864 cctccgcttgacggg 5052850




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 133     cctggatcgccgagc 147
               |||||||||||||||
Sbjct: 5068381 cctggatcgccgagc 5068367




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 390     gcccagttcggcggc 404
               |||||||||||||||
Sbjct: 5068464 gcccagttcggcggc 5068478




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 49      atcaggaagccgaag 63
               |||||||||||||||
Sbjct: 5076170 atcaggaagccgaag 5076184




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 261     gatcacccgcaggcc 275
               |||||||||||||||
Sbjct: 5099909 gatcacccgcaggcc 5099923




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 270     caggccgcggcgctt 284
               |||||||||||||||
Sbjct: 5138351 caggccgcggcgctt 5138337




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 136     ggatcgccgagctgatcgt 154
               |||||||||||| ||||||
Sbjct: 5296438 ggatcgccgagcagatcgt 5296456




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 539     cgagttcttccagcg 553
               |||||||||||||||
Sbjct: 5303688 cgagttcttccagcg 5303674




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 234     ggccgccgccagttc 248
               |||||||||||||||
Sbjct: 5375382 ggccgccgccagttc 5375396




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 384     gccgacgcccagttc 398
               |||||||||||||||
Sbjct: 5482589 gccgacgcccagttc 5482575




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 239     ccgccagttccagga 253
               |||||||||||||||
Sbjct: 5498261 ccgccagttccagga 5498247




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 21/23 (91%)
 Strand = Plus / Plus

                                      
Query: 532     tgctgggcgagttcttccagcgg 554
               ||||||||||||||  |||||||
Sbjct: 5546960 tgctgggcgagttccgccagcgg 5546982




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 171     ctgttcggcttcggcgaag 189
               ||||||||||||| |||||
Sbjct: 5663911 ctgttcggcttcgtcgaag 5663929




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 326     cgaccagcggcaccgcgcg 344
               |||||||||||| ||||||
Sbjct: 5676654 cgaccagcggcagcgcgcg 5676636




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 258     cctgatcacccgcag 272
               |||||||||||||||
Sbjct: 5844858 cctgatcacccgcag 5844872




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 392     ccagttcggcggcca 406
               |||||||||||||||
Sbjct: 5867733 ccagttcggcggcca 5867719




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 461     cgccctggctggcgc 475
               |||||||||||||||
Sbjct: 5978957 cgccctggctggcgc 5978943




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 172     tgttcggcttcggcg 186
               |||||||||||||||
Sbjct: 6063224 tgttcggcttcggcg 6063210




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 323     gaccgaccagcggca 337
               |||||||||||||||
Sbjct: 6235126 gaccgaccagcggca 6235140




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 140     cgccgagctgatcgt 154
               |||||||||||||||
Sbjct: 6242959 cgccgagctgatcgt 6242945




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 392     ccagttcggcggcca 406
               |||||||||||||||
Sbjct: 6423111 ccagttcggcggcca 6423097




  Database: pa14
    Posted date:  Jan 15, 2004  3:01 PM
  Number of letters in database: 6,534,396
  Number of sequences in database:  1
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,001
Number of Sequences: 1
Number of extensions: 11001
Number of successful extensions: 142
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 142
length of query: 934
length of database: 6,534,396
effective HSP length: 16
effective length of query: 918
effective length of database: 6,534,380
effective search space: 5998560840
effective search space used: 5998560840
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)