BLAST Search Results

BLASTN 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: pa14 
           1 sequences; 6,534,396 total letters



Query= 
         (938 letters)

Distribution of 88 Blast Hits on the Query Sequence



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GCTS_68                                                           549   e-156 

>GCTS_68 
          Length = 6534396

 Score =  549 bits (277), Expect = e-156
 Identities = 279/280 (99%)
 Strand = Plus / Minus

                                                                           
Query: 105     ctggnggaaatgaccgtggcccacgccacccccggctcgttcggcgccttcgccgagcac 164
               |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1606244 ctggcggaaatgaccgtggcccacgccacccccggctcgttcggcgccttcgccgagcac 1606185

                                                                           
Query: 165     tacgtcggcccgctggccgggttcctggtgcgctacgcctattgggcggccatcgtcctg 224
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1606184 tacgtcggcccgctggccgggttcctggtgcgctacgcctattgggcggccatcgtcctg 1606125

                                                                           
Query: 225     gcggtgggcaccgaggtcacggcggtggccatgtacatgaagtactggttcgccggtatc 284
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1606124 gcggtgggcaccgaggtcacggcggtggccatgtacatgaagtactggttcgccggtatc 1606065

                                                                           
Query: 285     ccggaatgggtctggatcatctccttctcgaccctgctgatcggcctgaacgccagcagc 344
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1606064 ccggaatgggtctggatcatctccttctcgaccctgctgatcggcctgaacgccagcagc 1606005

                                                       
Query: 345     gtgaaagccttcggcaacttcgaatactgcttctcgacac 384
               ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1606004 gtgaaagccttcggcaacttcgaatactgcttctcgacac 1605965




 Score = 38.2 bits (19), Expect = 0.020
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 170     cggcccgctggccgggttc 188
               |||||||||||||||||||
Sbjct: 4012130 cggcccgctggccgggttc 4012148




 Score = 36.2 bits (18), Expect = 0.078
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 146     cggcgccttcgccgagca 163
               ||||||||||||||||||
Sbjct: 1516836 cggcgccttcgccgagca 1516853




 Score = 36.2 bits (18), Expect = 0.078
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 222     ctggcggtgggcaccgag 239
               ||||||||||||||||||
Sbjct: 5123443 ctggcggtgggcaccgag 5123426




 Score = 36.2 bits (18), Expect = 0.078
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 145     tcggcgccttcgccgagc 162
               ||||||||||||||||||
Sbjct: 5488891 tcggcgccttcgccgagc 5488874




 Score = 36.2 bits (18), Expect = 0.078
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                         
Query: 176     gctggccgggttcctggtgcgctacg 201
               ||||||| || |||||||||||||||
Sbjct: 6131889 gctggcctgggtcctggtgcgctacg 6131864




 Score = 34.2 bits (17), Expect = 0.31
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                               
Query: 145    tcggcgccttcgccgag 161
              |||||||||||||||||
Sbjct: 630505 tcggcgccttcgccgag 630521




 Score = 34.2 bits (17), Expect = 0.31
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 317     cctgctgatcggcctga 333
               |||||||||||||||||
Sbjct: 1088859 cctgctgatcggcctga 1088875




 Score = 34.2 bits (17), Expect = 0.31
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 345     gtgaaagccttcggcaa 361
               |||||||||||||||||
Sbjct: 1874475 gtgaaagccttcggcaa 1874491




 Score = 34.2 bits (17), Expect = 0.31
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 146     cggcgccttcgccgagc 162
               |||||||||||||||||
Sbjct: 1927323 cggcgccttcgccgagc 1927339




 Score = 34.2 bits (17), Expect = 0.31
 Identities = 20/21 (95%)
 Strand = Plus / Plus

                                    
Query: 132     acccccggctcgttcggcgcc 152
               ||||||||||||| |||||||
Sbjct: 2194058 acccccggctcgtgcggcgcc 2194078




 Score = 34.2 bits (17), Expect = 0.31
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 167     cgtcggcccgctggccg 183
               |||||||||||||||||
Sbjct: 5094287 cgtcggcccgctggccg 5094271




 Score = 34.2 bits (17), Expect = 0.31
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 316     ccctgctgatcggcctg 332
               |||||||||||||||||
Sbjct: 5198272 ccctgctgatcggcctg 5198288




 Score = 34.2 bits (17), Expect = 0.31
 Identities = 20/21 (95%)
 Strand = Plus / Plus

                                    
Query: 211     cggccatcgtcctggcggtgg 231
               ||||||||| |||||||||||
Sbjct: 5980568 cggccatcggcctggcggtgg 5980588




 Score = 34.2 bits (17), Expect = 0.31
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 316     ccctgctgatcggcctg 332
               |||||||||||||||||
Sbjct: 6439926 ccctgctgatcggcctg 6439910




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                              
Query: 317    cctgctgatcggcctg 332
              ||||||||||||||||
Sbjct: 716874 cctgctgatcggcctg 716889




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 148     gcgccttcgccgagca 163
               ||||||||||||||||
Sbjct: 1788362 gcgccttcgccgagca 1788347




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 86      gcaggcctggccaggc 101
               ||||||||||||||||
Sbjct: 2122097 gcaggcctggccaggc 2122112




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 317     cctgctgatcggcctg 332
               ||||||||||||||||
Sbjct: 2302462 cctgctgatcggcctg 2302447




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 174     ccgctggccgggttcc 189
               ||||||||||||||||
Sbjct: 2451417 ccgctggccgggttcc 2451432




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 317     cctgctgatcggcctgaacg 336
               ||||||| ||||||||||||
Sbjct: 2595831 cctgctgctcggcctgaacg 2595850




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                   
Query: 169     tcggcccgctggccgggttc 188
               ||||| ||||||||||||||
Sbjct: 2740439 tcggcgcgctggccgggttc 2740420




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 344     cgtgaaagccttcggc 359
               ||||||||||||||||
Sbjct: 2743315 cgtgaaagccttcggc 2743300




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 317     cctgctgatcggcctg 332
               ||||||||||||||||
Sbjct: 3108370 cctgctgatcggcctg 3108385




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                   
Query: 328     gcctgaacgccagcagcgtg 347
               ||||||||||||||| ||||
Sbjct: 3165563 gcctgaacgccagcaacgtg 3165544




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 168     gtcggcccgctggccg 183
               ||||||||||||||||
Sbjct: 3924754 gtcggcccgctggccg 3924769




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 170     cggcccgctggccggg 185
               ||||||||||||||||
Sbjct: 4112401 cggcccgctggccggg 4112386




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                   
Query: 239     ggtcacggcggtggccatgt 258
               ||||||||||||||| ||||
Sbjct: 4133148 ggtcacggcggtggcgatgt 4133129




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 25/28 (89%)
 Strand = Plus / Plus

                                           
Query: 74      cgcgcatcatctgcaggcctggccaggc 101
               |||||| ||||||||||||  |||||||
Sbjct: 4473663 cgcgcagcatctgcaggccaagccaggc 4473690




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 265     agtactggttcgccgg 280
               ||||||||||||||||
Sbjct: 5129718 agtactggttcgccgg 5129703




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                   
Query: 169     tcggcccgctggccgggttc 188
               ||||||| ||||||||||||
Sbjct: 5275531 tcggccccctggccgggttc 5275512




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 168     gtcggcccgctggccg 183
               ||||||||||||||||
Sbjct: 5322219 gtcggcccgctggccg 5322204




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 317     cctgctgatcggcctg 332
               ||||||||||||||||
Sbjct: 5444609 cctgctgatcggcctg 5444594




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 169     tcggcccgctggccgg 184
               ||||||||||||||||
Sbjct: 5757450 tcggcccgctggccgg 5757435




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 317     cctgctgatcggcctg 332
               ||||||||||||||||
Sbjct: 6010478 cctgctgatcggcctg 6010463




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                   
Query: 314     gaccctgctgatcggcctga 333
               ||||||| ||||||||||||
Sbjct: 6177086 gaccctggtgatcggcctga 6177067




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 168    gtcggcccgctggcc 182
              |||||||||||||||
Sbjct: 164296 gtcggcccgctggcc 164282




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 217    tcgtcctggcggtgg 231
              |||||||||||||||
Sbjct: 357430 tcgtcctggcggtgg 357444




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 317    cctgctgatcggcct 331
              |||||||||||||||
Sbjct: 504166 cctgctgatcggcct 504152




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 137    cggctcgttcggcgc 151
              |||||||||||||||
Sbjct: 611448 cggctcgttcggcgc 611434




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 357    ggcaacttcgaatac 371
              |||||||||||||||
Sbjct: 811217 ggcaacttcgaatac 811203




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 148    gcgccttcgccgagc 162
              |||||||||||||||
Sbjct: 900198 gcgccttcgccgagc 900212




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 318    ctgctgatcggcctg 332
              |||||||||||||||
Sbjct: 999229 ctgctgatcggcctg 999215




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 149     cgccttcgccgagca 163
               |||||||||||||||
Sbjct: 1200864 cgccttcgccgagca 1200850




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 243     acggcggtggccatg 257
               |||||||||||||||
Sbjct: 1379625 acggcggtggccatg 1379639




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 145     tcggcgccttcgccg 159
               |||||||||||||||
Sbjct: 1400683 tcggcgccttcgccg 1400669




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 320     gctgatcggcctgaa 334
               |||||||||||||||
Sbjct: 1593877 gctgatcggcctgaa 1593891




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 145     tcggcgccttcgccg 159
               |||||||||||||||
Sbjct: 1635715 tcggcgccttcgccg 1635701




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 245     ggcggtggccatgtacatg 263
               |||| ||||||||||||||
Sbjct: 1679509 ggcgatggccatgtacatg 1679491




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 244     cggcggtggccatgt 258
               |||||||||||||||
Sbjct: 1743001 cggcggtggccatgt 1742987




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 142     cgttcggcgccttcgccga 160
               |||||| ||||||||||||
Sbjct: 1802427 cgttcgacgccttcgccga 1802445




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 318     ctgctgatcggcctg 332
               |||||||||||||||
Sbjct: 1884774 ctgctgatcggcctg 1884760




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 167     cgtcggcccgctggc 181
               |||||||||||||||
Sbjct: 1903364 cgtcggcccgctggc 1903378




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 147     ggcgccttcgccgag 161
               |||||||||||||||
Sbjct: 1917085 ggcgccttcgccgag 1917071




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 145     tcggcgccttcgccg 159
               |||||||||||||||
Sbjct: 2116642 tcggcgccttcgccg 2116656




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 170     cggcccgctggccgg 184
               |||||||||||||||
Sbjct: 2186486 cggcccgctggccgg 2186472




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 189     ctggtgcgctacgcc 203
               |||||||||||||||
Sbjct: 2207668 ctggtgcgctacgcc 2207682




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 145     tcggcgccttcgccg 159
               |||||||||||||||
Sbjct: 2375029 tcggcgccttcgccg 2375015




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 145     tcggcgccttcgccg 159
               |||||||||||||||
Sbjct: 2404201 tcggcgccttcgccg 2404187




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 209     ggcggccatcgtcctggcg 227
               |||||||||||||| ||||
Sbjct: 2446139 ggcggccatcgtccaggcg 2446121




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 130     ccacccccggctcgt 144
               |||||||||||||||
Sbjct: 3336633 ccacccccggctcgt 3336647




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 318     ctgctgatcggcctg 332
               |||||||||||||||
Sbjct: 3409281 ctgctgatcggcctg 3409295




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 114     atgaccgtggcccacgcca 132
               |||||||||||| ||||||
Sbjct: 3511723 atgaccgtggccgacgcca 3511741




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 319     tgctgatcggcctga 333
               |||||||||||||||
Sbjct: 3560429 tgctgatcggcctga 3560415




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 144     ttcggcgccttcgcc 158
               |||||||||||||||
Sbjct: 3609300 ttcggcgccttcgcc 3609314




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 189     ctggtgcgctacgcc 203
               |||||||||||||||
Sbjct: 3762328 ctggtgcgctacgcc 3762314




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 73      gcgcgcatcatctgc 87
               |||||||||||||||
Sbjct: 3900343 gcgcgcatcatctgc 3900329




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 146     cggcgccttcgccga 160
               |||||||||||||||
Sbjct: 4073208 cggcgccttcgccga 4073222




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 169     tcggcccgctggccg 183
               |||||||||||||||
Sbjct: 4328611 tcggcccgctggccg 4328625




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 149     cgccttcgccgagca 163
               |||||||||||||||
Sbjct: 4362965 cgccttcgccgagca 4362979




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 167     cgtcggcccgctggccggg 185
               ||||||| |||||||||||
Sbjct: 4446511 cgtcggcgcgctggccggg 4446529




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 318     ctgctgatcggcctg 332
               |||||||||||||||
Sbjct: 4470662 ctgctgatcggcctg 4470676




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 166     acgtcggcccgctgg 180
               |||||||||||||||
Sbjct: 5255734 acgtcggcccgctgg 5255748




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 144     ttcggcgccttcgcc 158
               |||||||||||||||
Sbjct: 5273836 ttcggcgccttcgcc 5273850




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 176     gctggccgggttcct 190
               |||||||||||||||
Sbjct: 5441854 gctggccgggttcct 5441868




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 315     accctgctgatcggc 329
               |||||||||||||||
Sbjct: 5598356 accctgctgatcggc 5598370




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 156     gccgagcactacgtcggcc 174
               |||||| ||||||||||||
Sbjct: 5642184 gccgaggactacgtcggcc 5642166




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 317     cctgctgatcggcctgaac 335
               ||||||||||| |||||||
Sbjct: 5738066 cctgctgatcgacctgaac 5738084




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 322     tgatcggcctgaacg 336
               |||||||||||||||
Sbjct: 5845658 tgatcggcctgaacg 5845672




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 145     tcggcgccttcgccg 159
               |||||||||||||||
Sbjct: 5867155 tcggcgccttcgccg 5867141




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 146     cggcgccttcgccga 160
               |||||||||||||||
Sbjct: 5899649 cggcgccttcgccga 5899663




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 143     gttcggcgccttcgccgag 161
               |||| ||||||||||||||
Sbjct: 5938514 gttcagcgccttcgccgag 5938532




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 273     ttcgccggtatcccg 287
               |||||||||||||||
Sbjct: 6139157 ttcgccggtatcccg 6139171




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 148     gcgccttcgccgagc 162
               |||||||||||||||
Sbjct: 6342843 gcgccttcgccgagc 6342857




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 147     ggcgccttcgccgag 161
               |||||||||||||||
Sbjct: 6389911 ggcgccttcgccgag 6389925




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 318     ctgctgatcggcctg 332
               |||||||||||||||
Sbjct: 6409459 ctgctgatcggcctg 6409473




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 200     cgcctattgggcggc 214
               |||||||||||||||
Sbjct: 6473614 cgcctattgggcggc 6473600




 Score = 30.2 bits (15), Expect = 4.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 188     cctggtgcgctacgc 202
               |||||||||||||||
Sbjct: 6477514 cctggtgcgctacgc 6477528




  Database: pa14
    Posted date:  Jan 15, 2004  3:01 PM
  Number of letters in database: 6,534,396
  Number of sequences in database:  1
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6007
Number of Sequences: 1
Number of extensions: 6007
Number of successful extensions: 88
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 88
length of query: 938
length of database: 6,534,396
effective HSP length: 16
effective length of query: 922
effective length of database: 6,534,380
effective search space: 6024698360
effective search space used: 6024698360
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)