BLAST Search Results

BLASTN 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: pa14 
           1 sequences; 6,534,396 total letters



Query= 
         (881 letters)

Distribution of 114 Blast Hits on the Query Sequence



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GCTS_68                                                           999   0.0   

>GCTS_68 
          Length = 6534396

 Score =  999 bits (504), Expect = 0.0
 Identities = 513/515 (99%), Gaps = 2/515 (0%)
 Strand = Plus / Minus

                                                                           
Query: 61      tacagccaggggatgccgacccggtcgccttccttcacccgggtcactccgctgcccacc 120
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5644006 tacagccaggggatgccgacccggtcgccttccttcacccgggtcactccgctgcccacc 5643947

                                                                           
Query: 121     gcggcgacgtagccgacgccttcgtgaccgggaatgaacggcaacggcggcttcaccggc 180
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5643946 gcggcgacgtagccgacgccttcgtgaccgggaatgaacggcaacggcggcttcaccggc 5643887

                                                                           
Query: 181     cagtcgccctcggcggcgtgcaggtcggtgtggcagacgccggaggcttcgatcttcacc 240
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5643886 cagtcgccctcggcggcgtgcaggtcggtgtggcagacgccggaggcttcgatcttcacc 5643827

                                                                           
Query: 241     agtacctgcccggggccgggcagcggaaccttgacttcctcgatccgcagcggcgcgccg 300
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5643826 agtacctgcccggggccgggcagcggaaccttgacttcctcgatccgcagcggcgcgccg 5643767

                                                                           
Query: 301     taggcgtgcacgaccgcggctttcatggtctgtggcagggtcatggtcatctccttggac 360
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5643766 taggcgtgcacgaccgcggctttcatggtctgtggcagggtcatggtcatctccttggac 5643707

                                                                           
Query: 361     ggggctgagcgcncctgtcgcggtgcctttgacgggcaccgcgacaggctgcggaaccgg 420
               |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5643706 ggggctgagcg--cctgtcgcggtgcctttgacgggcaccgcgacaggctgcggaaccgg 5643649

                                                                           
Query: 421     cgcggccgccgctccctcggagcgcgccgcgacaaccagtctggccgctcgtggcaggcg 480
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5643648 cgcggccgccgctccctcggagcgcgccgcgacaaccagtctggccgctcgtggcaggcg 5643589

                                                                           
Query: 481     cgcattgagttgcggcaagtttcccgccatggcgcgaaaaaacgggacggacggtagccc 540
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5643588 cgcattgagttgcggcaagtttcccgccatggcgcgaaaaaacgggacggacggtagccc 5643529

                                                  
Query: 541     ccggcgcgcgcccggcctgcctttgcggtatactg 575
               |||||||||||||||||||||||||||||||||||
Sbjct: 5643528 ccggcgcgcgcccggcctgcctttgcggtatactg 5643494




 Score = 38.2 bits (19), Expect = 0.018
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 100     cgggtcactccgctgcccaccgc 122
               ||||||||| |||||||||||||
Sbjct: 5826671 cgggtcacttcgctgcccaccgc 5826693




 Score = 38.2 bits (19), Expect = 0.018
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 188     cctcggcggcgtgcaggtcggtg 210
               |||||||| ||||||||||||||
Sbjct: 6067524 cctcggcgtcgtgcaggtcggtg 6067502




 Score = 36.2 bits (18), Expect = 0.073
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 82      cggtcgccttccttcacc 99
               ||||||||||||||||||
Sbjct: 3591179 cggtcgccttccttcacc 3591196




 Score = 36.2 bits (18), Expect = 0.073
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                     
Query: 418     cggcgcggccgccgctccctcg 439
               |||||||||||| |||||||||
Sbjct: 5138177 cggcgcggccgcggctccctcg 5138198




 Score = 34.2 bits (17), Expect = 0.29
 Identities = 23/25 (92%)
 Strand = Plus / Plus

                                        
Query: 182     agtcgccctcggcggcgtgcaggtc 206
               ||||| ||||||| |||||||||||
Sbjct: 1607206 agtcggcctcggccgcgtgcaggtc 1607230




 Score = 34.2 bits (17), Expect = 0.29
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 206     cggtgtggcagacgccg 222
               |||||||||||||||||
Sbjct: 4174393 cggtgtggcagacgccg 4174377




 Score = 34.2 bits (17), Expect = 0.29
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 140     cttcgtgaccgggaatg 156
               |||||||||||||||||
Sbjct: 4743451 cttcgtgaccgggaatg 4743467




 Score = 34.2 bits (17), Expect = 0.29
 Identities = 20/21 (95%)
 Strand = Plus / Plus

                                    
Query: 434     ccctcggagcgcgccgcgaca 454
               |||||| ||||||||||||||
Sbjct: 5852255 ccctcgaagcgcgccgcgaca 5852275




 Score = 34.2 bits (17), Expect = 0.29
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 412     cggaaccggcgcggccg 428
               |||||||||||||||||
Sbjct: 6237762 cggaaccggcgcggccg 6237778




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                              
Query: 442    gcgcgccgcgacaacc 457
              ||||||||||||||||
Sbjct: 181574 gcgcgccgcgacaacc 181589




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                              
Query: 417    ccggcgcggccgccgc 432
              ||||||||||||||||
Sbjct: 210121 ccggcgcggccgccgc 210136




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                  
Query: 278    cctcgatccgcagcggcgcg 297
              |||||||| |||||||||||
Sbjct: 256697 cctcgatcagcagcggcgcg 256678




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                              
Query: 117    caccgcggcgacgtag 132
              ||||||||||||||||
Sbjct: 272373 caccgcggcgacgtag 272388




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                              
Query: 542    cggcgcgcgcccggcc 557
              ||||||||||||||||
Sbjct: 538850 cggcgcgcgcccggcc 538865




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                              
Query: 543    ggcgcgcgcccggcct 558
              ||||||||||||||||
Sbjct: 581266 ggcgcgcgcccggcct 581251




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                  
Query: 278    cctcgatccgcagcggcgcg 297
              |||||||||||||| |||||
Sbjct: 833479 cctcgatccgcagcagcgcg 833460




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                              
Query: 190    tcggcggcgtgcaggt 205
              ||||||||||||||||
Sbjct: 882473 tcggcggcgtgcaggt 882488




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 165     cggcggcttcaccggc 180
               ||||||||||||||||
Sbjct: 1016361 cggcggcttcaccggc 1016346




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 286     cgcagcggcgcgccgt 301
               ||||||||||||||||
Sbjct: 1517826 cgcagcggcgcgccgt 1517841




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 413     ggaaccggcgcggccg 428
               ||||||||||||||||
Sbjct: 1565197 ggaaccggcgcggccg 1565212




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 111     gctgcccaccgcggcg 126
               ||||||||||||||||
Sbjct: 1841641 gctgcccaccgcggcg 1841656




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 84      gtcgccttccttcacc 99
               ||||||||||||||||
Sbjct: 1935882 gtcgccttccttcacc 1935867




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 227     cttcgatcttcaccag 242
               ||||||||||||||||
Sbjct: 2132621 cttcgatcttcaccag 2132606




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 168     cggcttcaccggccag 183
               ||||||||||||||||
Sbjct: 2244070 cggcttcaccggccag 2244085




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 165     cggcggcttcaccggc 180
               ||||||||||||||||
Sbjct: 2417642 cggcggcttcaccggc 2417627




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 157     aacggcaacggcggct 172
               ||||||||||||||||
Sbjct: 2505738 aacggcaacggcggct 2505723




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 285     ccgcagcggcgcgccg 300
               ||||||||||||||||
Sbjct: 2584858 ccgcagcggcgcgccg 2584843




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                   
Query: 53      caacctgttacagccagggg 72
               |||||| |||||||||||||
Sbjct: 3092030 caacctattacagccagggg 3092011




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 84      gtcgccttccttcacc 99
               ||||||||||||||||
Sbjct: 3447831 gtcgccttccttcacc 3447846




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 540     cccggcgcgcgcccgg 555
               ||||||||||||||||
Sbjct: 3867477 cccggcgcgcgcccgg 3867462




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 183     gtcgccctcggcggcg 198
               ||||||||||||||||
Sbjct: 3887076 gtcgccctcggcggcg 3887091




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 334     ggcagggtcatggtca 349
               ||||||||||||||||
Sbjct: 3906890 ggcagggtcatggtca 3906905




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 188     cctcggcggcgtgcag 203
               ||||||||||||||||
Sbjct: 3969561 cctcggcggcgtgcag 3969576




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 466     cgctcgtggcaggcgc 481
               ||||||||||||||||
Sbjct: 4425541 cgctcgtggcaggcgc 4425556




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 165     cggcggcttcaccggc 180
               ||||||||||||||||
Sbjct: 5245667 cggcggcttcaccggc 5245652




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 183     gtcgccctcggcggcg 198
               ||||||||||||||||
Sbjct: 5276405 gtcgccctcggcggcg 5276420




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 179     gccagtcgccctcggc 194
               ||||||||||||||||
Sbjct: 5332770 gccagtcgccctcggc 5332755




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 415     aaccggcgcggccgcc 430
               ||||||||||||||||
Sbjct: 5392221 aaccggcgcggccgcc 5392236




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 31/36 (86%)
 Strand = Plus / Plus

                                                   
Query: 374     cctgtcgcggtgcctttgacgggcaccgcgacaggc 409
               ||||||||||||||  | |  |||||||||||||||
Sbjct: 5643661 cctgtcgcggtgcccgtcaaaggcaccgcgacaggc 5643696




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 444     gcgccgcgacaaccag 459
               ||||||||||||||||
Sbjct: 5897586 gcgccgcgacaaccag 5897571




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 192     ggcggcgtgcaggtcg 207
               ||||||||||||||||
Sbjct: 5996033 ggcggcgtgcaggtcg 5996048




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 418     cggcgcggccgccgct 433
               ||||||||||||||||
Sbjct: 6435304 cggcgcggccgccgct 6435319




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                   
Query: 287     gcagcggcgcgccgtaggcg 306
               |||||||||||| |||||||
Sbjct: 6505450 gcagcggcgcgcggtaggcg 6505431




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                            
Query: 418   cggcgcggccgccgc 432
             |||||||||||||||
Sbjct: 95225 cggcgcggccgccgc 95239




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 276    ttcctcgatccgcag 290
              |||||||||||||||
Sbjct: 137953 ttcctcgatccgcag 137939




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 113    tgcccaccgcggcga 127
              |||||||||||||||
Sbjct: 159084 tgcccaccgcggcga 159098




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 184    tcgccctcggcggcg 198
              |||||||||||||||
Sbjct: 249574 tcgccctcggcggcg 249588




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 179    gccagtcgccctcgg 193
              |||||||||||||||
Sbjct: 263302 gccagtcgccctcgg 263288




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 155    tgaacggcaacggcg 169
              |||||||||||||||
Sbjct: 350691 tgaacggcaacggcg 350677




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 399    ccgcgacaggctgcg 413
              |||||||||||||||
Sbjct: 510327 ccgcgacaggctgcg 510313




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 184    tcgccctcggcggcg 198
              |||||||||||||||
Sbjct: 542428 tcgccctcggcggcg 542414




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                 
Query: 117    caccgcggcgacgtagccg 135
              |||| ||||||||||||||
Sbjct: 658161 cacctcggcgacgtagccg 658179




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 184    tcgccctcggcggcg 198
              |||||||||||||||
Sbjct: 695576 tcgccctcggcggcg 695562




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 114    gcccaccgcggcgac 128
              |||||||||||||||
Sbjct: 892765 gcccaccgcggcgac 892751




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 184     tcgccctcggcggcg 198
               |||||||||||||||
Sbjct: 1070474 tcgccctcggcggcg 1070460




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 187     ccctcggcggcgtgc 201
               |||||||||||||||
Sbjct: 1075163 ccctcggcggcgtgc 1075177




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 544     gcgcgcgcccggcct 558
               |||||||||||||||
Sbjct: 1116764 gcgcgcgcccggcct 1116778




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 217     acgccggaggcttcgatct 235
               |||||| ||||||||||||
Sbjct: 1257592 acgccgtaggcttcgatct 1257574




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 190     tcggcggcgtgcagg 204
               |||||||||||||||
Sbjct: 1265436 tcggcggcgtgcagg 1265450




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 691     ggccttttctttatt 705
               |||||||||||||||
Sbjct: 1280392 ggccttttctttatt 1280406




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 327     ggtctgtggcagggtcatg 345
               |||||| ||||||||||||
Sbjct: 1287167 ggtctgcggcagggtcatg 1287185




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 414     gaaccggcgcggccgccgc 432
               ||||||||||||| |||||
Sbjct: 1385168 gaaccggcgcggctgccgc 1385150




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 183     gtcgccctcggcggc 197
               |||||||||||||||
Sbjct: 1424966 gtcgccctcggcggc 1424980




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 546     gcgcgcccggcctgc 560
               |||||||||||||||
Sbjct: 1530808 gcgcgcccggcctgc 1530794




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 184     tcgccctcggcggcg 198
               |||||||||||||||
Sbjct: 1586229 tcgccctcggcggcg 1586215




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 184     tcgccctcggcggcg 198
               |||||||||||||||
Sbjct: 1622449 tcgccctcggcggcg 1622435




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 417     ccggcgcggccgccg 431
               |||||||||||||||
Sbjct: 1645373 ccggcgcggccgccg 1645359




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 286     cgcagcggcgcgccg 300
               |||||||||||||||
Sbjct: 1742232 cgcagcggcgcgccg 1742218




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 194     cggcgtgcaggtcgg 208
               |||||||||||||||
Sbjct: 1746178 cggcgtgcaggtcgg 1746192




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 282     gatccgcagcggcgcgccg 300
               ||||||||||| |||||||
Sbjct: 1791195 gatccgcagcgccgcgccg 1791213




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 288     cagcggcgcgccgtaggcg 306
               |||||||||||||| ||||
Sbjct: 1847627 cagcggcgcgccgtcggcg 1847645




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 190     tcggcggcgtgcagg 204
               |||||||||||||||
Sbjct: 1903555 tcggcggcgtgcagg 1903541




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 286     cgcagcggcgcgccg 300
               |||||||||||||||
Sbjct: 1910271 cgcagcggcgcgccg 1910257




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 286     cgcagcggcgcgccg 300
               |||||||||||||||
Sbjct: 1929913 cgcagcggcgcgccg 1929899




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 445     cgccgcgacaaccag 459
               |||||||||||||||
Sbjct: 2078716 cgccgcgacaaccag 2078730




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 126     gacgtagccgacgcc 140
               |||||||||||||||
Sbjct: 2171054 gacgtagccgacgcc 2171040




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 407     ggctgcggaaccggc 421
               |||||||||||||||
Sbjct: 2226300 ggctgcggaaccggc 2226286




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 184     tcgccctcggcggcg 198
               |||||||||||||||
Sbjct: 2604310 tcgccctcggcggcg 2604296




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 109     ccgctgcccaccgcg 123
               |||||||||||||||
Sbjct: 2644475 ccgctgcccaccgcg 2644461




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 113     tgcccaccgcggcga 127
               |||||||||||||||
Sbjct: 2658335 tgcccaccgcggcga 2658321




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 542     cggcgcgcgcccggc 556
               |||||||||||||||
Sbjct: 2711419 cggcgcgcgcccggc 2711405




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 184     tcgccctcggcggcg 198
               |||||||||||||||
Sbjct: 2760840 tcgccctcggcggcg 2760826




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 469     tcgtggcaggcgcgc 483
               |||||||||||||||
Sbjct: 2857345 tcgtggcaggcgcgc 2857359




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 166     ggcggcttcaccggccagt 184
               |||||||||||| ||||||
Sbjct: 3055007 ggcggcttcacccgccagt 3055025




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 187     ccctcggcggcgtgc 201
               |||||||||||||||
Sbjct: 3458771 ccctcggcggcgtgc 3458757




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 36/43 (83%)
 Strand = Plus / Plus

                                                          
Query: 205     tcggtgtggcagacgccggaggcttcgatcttcaccagtacct 247
               ||||| ||||||||||||| |||  ||||   |||||||||||
Sbjct: 3460784 tcggtatggcagacgccggtggcgacgatgcgcaccagtacct 3460826




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 194     cggcgtgcaggtcgg 208
               |||||||||||||||
Sbjct: 3488737 cggcgtgcaggtcgg 3488723




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 471     gtggcaggcgcgcat 485
               |||||||||||||||
Sbjct: 3869270 gtggcaggcgcgcat 3869256




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 21/23 (91%)
 Strand = Plus / Minus

                                      
Query: 185     cgccctcggcggcgtgcaggtcg 207
               |||||||||||||| || |||||
Sbjct: 3877523 cgccctcggcggcgagcgggtcg 3877501




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 538     cccccggcgcgcgcc 552
               |||||||||||||||
Sbjct: 3881591 cccccggcgcgcgcc 3881577




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 174     caccggccagtcgcc 188
               |||||||||||||||
Sbjct: 3968562 caccggccagtcgcc 3968576




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 131     agccgacgccttcgt 145
               |||||||||||||||
Sbjct: 4056476 agccgacgccttcgt 4056490




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 286     cgcagcggcgcgccg 300
               |||||||||||||||
Sbjct: 4171514 cgcagcggcgcgccg 4171500




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 541     ccggcgcgcgcccgg 555
               |||||||||||||||
Sbjct: 4240923 ccggcgcgcgcccgg 4240937




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 723     tttcttctttgtttt 737
               |||||||||||||||
Sbjct: 4540809 tttcttctttgtttt 4540795




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 194     cggcgtgcaggtcgg 208
               |||||||||||||||
Sbjct: 4797357 cggcgtgcaggtcgg 4797343




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 184     tcgccctcggcggcg 198
               |||||||||||||||
Sbjct: 4880825 tcgccctcggcggcg 4880839




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 619     acgagccgcgctcgg 633
               |||||||||||||||
Sbjct: 4982192 acgagccgcgctcgg 4982206




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 129     gtagccgacgccttc 143
               |||||||||||||||
Sbjct: 5318888 gtagccgacgccttc 5318902




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 157     aacggcaacggcggc 171
               |||||||||||||||
Sbjct: 5319305 aacggcaacggcggc 5319319




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 438     cggagcgcgccgcga 452
               |||||||||||||||
Sbjct: 5321164 cggagcgcgccgcga 5321178




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 335     gcagggtcatggtca 349
               |||||||||||||||
Sbjct: 5338992 gcagggtcatggtca 5338978




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 180     ccagtcgccctcggc 194
               |||||||||||||||
Sbjct: 5408106 ccagtcgccctcggc 5408120




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 288     cagcggcgcgccgtaggcg 306
               ||||||||||||| |||||
Sbjct: 5536533 cagcggcgcgccggaggcg 5536551




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 85      tcgccttccttcacc 99
               |||||||||||||||
Sbjct: 5653259 tcgccttccttcacc 5653273




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 291     cggcgcgccgtaggc 305
               |||||||||||||||
Sbjct: 5707230 cggcgcgccgtaggc 5707244




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 418     cggcgcggccgccgc 432
               |||||||||||||||
Sbjct: 5716034 cggcgcggccgccgc 5716048




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 446     gccgcgacaaccagt 460
               |||||||||||||||
Sbjct: 5909878 gccgcgacaaccagt 5909892




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 293     gcgcgccgtaggcgt 307
               |||||||||||||||
Sbjct: 5910523 gcgcgccgtaggcgt 5910509




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 213     gcagacgccggaggc 227
               |||||||||||||||
Sbjct: 5979427 gcagacgccggaggc 5979441




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 540     cccggcgcgcgcccg 554
               |||||||||||||||
Sbjct: 5987305 cccggcgcgcgcccg 5987291




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 439     ggagcgcgccgcgac 453
               |||||||||||||||
Sbjct: 6271666 ggagcgcgccgcgac 6271680




 Score = 30.2 bits (15), Expect = 4.5
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 159     cggcaacggcggcttcacc 177
               |||| ||||||||||||||
Sbjct: 6457121 cggctacggcggcttcacc 6457103




  Database: pa14
    Posted date:  Jan 15, 2004  3:01 PM
  Number of letters in database: 6,534,396
  Number of sequences in database:  1
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8396
Number of Sequences: 1
Number of extensions: 8396
Number of successful extensions: 116
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 114
length of query: 881
length of database: 6,534,396
effective HSP length: 16
effective length of query: 865
effective length of database: 6,534,380
effective search space: 5652238700
effective search space used: 5652238700
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)