BLASTN 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: pa14 
           1 sequences; 6,534,396 total letters



Query= 
         (908 letters)

Distribution of 109 Blast Hits on the Query Sequence 



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GCTS_68                                                           882   0.0   



>GCTS_68 
          Length = 6534396

 Score =  882 bits (445), Expect = 0.0
 Identities = 566/601 (94%), Gaps = 4/601 (0%)
 Strand = Plus / Plus

                                                                           
Query: 62      tataggacgccactgcaagacctcatcggcgcatcatcttccggggtgcgcacgagcgcg 121
               |||||||||||||||||||||||||||||||||||||| |||  ||  ||  || |||||
Sbjct: 6038348 tataggacgccactgcaagacctcatcggcgcatcatcctccccgggccgggcgtgcgcg 6038407

                                                                           
Query: 122     cctcgattgttgtgtccgccgcgctgcaagcaagttgcaggccgctgccgagcgtcgcgg 181
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6038408 cctcgattgttgtgtccgccgcgctgcaagcaagttgcaggccgctgccgagcgtcgcgg 6038467

                                                                           
Query: 182     cgctggccgcgacgacgattgcccgcctgcacgataacccagcacgacgcactttgccgg 241
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6038468 cgctggccgcgacgacgattgcccgcctgcacgataacccagcacgacgcactttgccgg 6038527

                                                                           
Query: 242     ggcacgcctggccagctttttcttatgtcccgaggacatttttaataattttccttcgcc 301
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6038528 ggcacgcctggccagctttttcttatgtcccgaggacatttttaataattttccttcgcc 6038587

                                                                           
Query: 302     gcggcttgcgcgaccatccttccccatcgaccccatggacagcggtccgcctcccggcgg 361
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6038588 gcggcttgcgcgaccatccttccccatcgaccccatggacagcggtccgcctcccggcgg 6038647

                                                                           
Query: 362     tccgggccatgcgtgcagaaccacgaccggcgcagaccggcgagataacaaggagaaggt 421
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6038648 tccgggccatgcgtgcagaaccacgaccggcgcagaccggcgagataacaaggagaaggt 6038707

                                                                           
Query: 422     ggggtgttcgaactcagcgattggcaacggcgcgccgcgacacagcgcttcatcgaccag 481
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6038708 ggggtgttcgaactcagcgattggcaacggcgcgccgcgacacagcgcttcatcgaccag 6038767

                                                                           
Query: 482     gccctgatcggcggccgccagcgtacggccgccagcggcgcttccttcgacgccatcgat 541
               |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 6038768 gccctgatcggcggccgccagcgtccggccgccagcggcgctaccttcgacgccatcgat 6038827

                                                                           
Query: 542     cctgcgaagaattctctgttggctcgggtcccggccctgttattgcggccgacatctacg 601
               || ||||  |||   ||| |||| |||||| ||| ||||  | |||||||||| || |||
Sbjct: 6038828 ccggcgagcaatcgcctgctggcgcgggtcgcgg-cctgcga-tgcggccgacgtcgacg 6038885

                                                                           
Query: 602     cggcagtggtctgctgcctg-cgcgccttcaaacaaggcccctggccgcctctcgccccg 660
               ||||||||| | || ||| | ||||||||| |  ||||||||||| ||| ||||||||||
Sbjct: 6038886 cggcagtgg-ccgccgcccgccgcgccttcgacgaaggcccctgggcgcgtctcgccccg 6038944

                
Query: 661     g 661
               |
Sbjct: 6038945 g 6038945






 Score = 38.2 bits (19), Expect = 0.019
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 466     gcgcttcatcgaccaggccctga 488
               ||||||| |||||||||||||||
Sbjct: 5029117 gcgcttcttcgaccaggccctga 5029139






 Score = 36.2 bits (18), Expect = 0.075
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 169    ccgagcgtcgcggcgctg 186
              ||||||||||||||||||
Sbjct: 629975 ccgagcgtcgcggcgctg 629958






 Score = 36.2 bits (18), Expect = 0.075
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 158     gcaggccgctgccgagcg 175
               ||||||||||||||||||
Sbjct: 1055214 gcaggccgctgccgagcg 1055231






 Score = 34.2 bits (17), Expect = 0.30
 Identities = 20/21 (95%)
 Strand = Plus / Plus

                                    
Query: 507     cggccgccagcggcgcttcct 527
               |||||||| ||||||||||||
Sbjct: 2457605 cggccgcctgcggcgcttcct 2457625






 Score = 34.2 bits (17), Expect = 0.30
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 471     tcatcgaccaggccctg 487
               |||||||||||||||||
Sbjct: 2885889 tcatcgaccaggccctg 2885873






 Score = 34.2 bits (17), Expect = 0.30
 Identities = 20/21 (95%)
 Strand = Plus / Minus

                                    
Query: 172     agcgtcgcggcgctggccgcg 192
               |||||||||||| ||||||||
Sbjct: 4117290 agcgtcgcggcgatggccgcg 4117270






 Score = 34.2 bits (17), Expect = 0.30
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 462     cacagcgcttcatcgac 478
               |||||||||||||||||
Sbjct: 4405323 cacagcgcttcatcgac 4405339






 Score = 34.2 bits (17), Expect = 0.30
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 176     tcgcggcgctggccgcg 192
               |||||||||||||||||
Sbjct: 4706229 tcgcggcgctggccgcg 4706213






 Score = 34.2 bits (17), Expect = 0.30
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 151     gcaagttgcaggccgct 167
               |||||||||||||||||
Sbjct: 5182357 gcaagttgcaggccgct 5182373






 Score = 34.2 bits (17), Expect = 0.30
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 158     gcaggccgctgccgagc 174
               |||||||||||||||||
Sbjct: 5238945 gcaggccgctgccgagc 5238929






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                              
Query: 506    acggccgccagcggcg 521
              ||||||||||||||||
Sbjct: 449320 acggccgccagcggcg 449335






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                              
Query: 158    gcaggccgctgccgag 173
              ||||||||||||||||
Sbjct: 590814 gcaggccgctgccgag 590799






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                              
Query: 172    agcgtcgcggcgctgg 187
              ||||||||||||||||
Sbjct: 610445 agcgtcgcggcgctgg 610430






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                              
Query: 473    atcgaccaggccctga 488
              ||||||||||||||||
Sbjct: 870353 atcgaccaggccctga 870338






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 241     gggcacgcctggccag 256
               ||||||||||||||||
Sbjct: 1120496 gggcacgcctggccag 1120511






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                   
Query: 472     catcgaccaggccctgatcg 491
               ||||| ||||||||||||||
Sbjct: 1606802 catcgtccaggccctgatcg 1606783






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 506     acggccgccagcggcg 521
               ||||||||||||||||
Sbjct: 1659252 acggccgccagcggcg 1659267






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 389     cggcgcagaccggcga 404
               ||||||||||||||||
Sbjct: 1677149 cggcgcagaccggcga 1677164






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 511     cgccagcggcgcttcc 526
               ||||||||||||||||
Sbjct: 1881544 cgccagcggcgcttcc 1881559






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 489     tcggcggccgccagcg 504
               ||||||||||||||||
Sbjct: 1923171 tcggcggccgccagcg 1923186






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 162     gccgctgccgagcgtc 177
               ||||||||||||||||
Sbjct: 1937966 gccgctgccgagcgtc 1937951






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 175     gtcgcggcgctggccg 190
               ||||||||||||||||
Sbjct: 2163015 gtcgcggcgctggccg 2163000






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 478     ccaggccctgatcggc 493
               ||||||||||||||||
Sbjct: 2316530 ccaggccctgatcggc 2316545






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 130     gttgtgtccgccgcgc 145
               ||||||||||||||||
Sbjct: 2366625 gttgtgtccgccgcgc 2366610






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 472     catcgaccaggccctg 487
               ||||||||||||||||
Sbjct: 2379021 catcgaccaggccctg 2379036






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 827     tagactgggttctcca 842
               ||||||||||||||||
Sbjct: 2658033 tagactgggttctcca 2658048






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                   
Query: 606     agtggtctgctgcctgcgcg 625
               ||||||| ||||||||||||
Sbjct: 2972374 agtggtcggctgcctgcgcg 2972355






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 25/28 (89%)
 Strand = Plus / Minus

                                           
Query: 474     tcgaccaggccctgatcggcggccgcca 501
               |||||||||||| |||| ||| ||||||
Sbjct: 3101668 tcgaccaggcccagatcagcgaccgcca 3101641






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 380     aaccacgaccggcgca 395
               ||||||||||||||||
Sbjct: 3288770 aaccacgaccggcgca 3288785






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 510     ccgccagcggcgcttc 525
               ||||||||||||||||
Sbjct: 3715374 ccgccagcggcgcttc 3715359






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 177     cgcggcgctggccgcg 192
               ||||||||||||||||
Sbjct: 3845343 cgcggcgctggccgcg 3845358






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 478     ccaggccctgatcggc 493
               ||||||||||||||||
Sbjct: 4814579 ccaggccctgatcggc 4814564






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 389     cggcgcagaccggcga 404
               ||||||||||||||||
Sbjct: 5082425 cggcgcagaccggcga 5082410






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 241     gggcacgcctggccag 256
               ||||||||||||||||
Sbjct: 5468769 gggcacgcctggccag 5468784






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                   
Query: 484     cctgatcggcggccgccagc 503
               |||||||||||||| |||||
Sbjct: 5746118 cctgatcggcggccaccagc 5746099






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 237     gccggggcacgcctgg 252
               ||||||||||||||||
Sbjct: 5953591 gccggggcacgcctgg 5953576






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 300     ccgcggcttgcgcgac 315
               ||||||||||||||||
Sbjct: 6000831 ccgcggcttgcgcgac 6000816






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 654     cgccccgggcgaaggc 669
               ||||||||||||||||
Sbjct: 6131504 cgccccgggcgaaggc 6131519






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 158     gcaggccgctgccgag 173
               ||||||||||||||||
Sbjct: 6273280 gcaggccgctgccgag 6273295






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 655  gccccgggcgaaggc 669
            |||||||||||||||
Sbjct: 4346 gccccgggcgaaggc 4360






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 191  cgacgacgattgccc 205
            |||||||||||||||
Sbjct: 8220 cgacgacgattgccc 8234






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 134    tgtccgccgcgctgc 148
              |||||||||||||||
Sbjct: 185619 tgtccgccgcgctgc 185605






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 446    caacggcgcgccgcg 460
              |||||||||||||||
Sbjct: 306517 caacggcgcgccgcg 306531






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 174    cgtcgcggcgctggc 188
              |||||||||||||||
Sbjct: 374176 cgtcgcggcgctggc 374190






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 174    cgtcgcggcgctggc 188
              |||||||||||||||
Sbjct: 406880 cgtcgcggcgctggc 406894






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 301    cgcggcttgcgcgac 315
              |||||||||||||||
Sbjct: 448092 cgcggcttgcgcgac 448106






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 490    cggcggccgccagcg 504
              |||||||||||||||
Sbjct: 484330 cggcggccgccagcg 484344






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 507    cggccgccagcggcg 521
              |||||||||||||||
Sbjct: 578038 cggccgccagcggcg 578052






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 21/23 (91%)
 Strand = Plus / Minus

                                     
Query: 474    tcgaccaggccctgatcggcggc 496
              |||||||||||||| ||| ||||
Sbjct: 687104 tcgaccaggccctgctcgccggc 687082






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                 
Query: 517    cggcgcttccttcgacgcc 535
              ||||||||||| |||||||
Sbjct: 796566 cggcgcttcctacgacgcc 796584






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 168    gccgagcgtcgcggc 182
              |||||||||||||||
Sbjct: 836849 gccgagcgtcgcggc 836835






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 507    cggccgccagcggcg 521
              |||||||||||||||
Sbjct: 845237 cggccgccagcggcg 845223






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 429    tcgaactcagcgatt 443
              |||||||||||||||
Sbjct: 874113 tcgaactcagcgatt 874127






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 352     ctcccggcggtccgg 366
               |||||||||||||||
Sbjct: 1284907 ctcccggcggtccgg 1284893






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 182     cgctggccgcgacgacgat 200
               ||||||| |||||||||||
Sbjct: 1338865 cgctggcggcgacgacgat 1338883






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 488     atcggcggccgccag 502
               |||||||||||||||
Sbjct: 1404608 atcggcggccgccag 1404594






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 318     tccttccccatcgac 332
               |||||||||||||||
Sbjct: 1409235 tccttccccatcgac 1409221






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 177     cgcggcgctggccgc 191
               |||||||||||||||
Sbjct: 1516987 cgcggcgctggccgc 1516973






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 174     cgtcgcggcgctggc 188
               |||||||||||||||
Sbjct: 1685168 cgtcgcggcgctggc 1685154






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 137     ccgccgcgctgcaag 151
               |||||||||||||||
Sbjct: 1743242 ccgccgcgctgcaag 1743256






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 242     ggcacgcctggccag 256
               |||||||||||||||
Sbjct: 1824807 ggcacgcctggccag 1824821






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 160     aggccgctgccgagc 174
               |||||||||||||||
Sbjct: 1875594 aggccgctgccgagc 1875580






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 177     cgcggcgctggccgc 191
               |||||||||||||||
Sbjct: 1886127 cgcggcgctggccgc 1886113






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 450     ggcgcgccgcgacac 464
               |||||||||||||||
Sbjct: 2054423 ggcgcgccgcgacac 2054409






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 178     gcggcgctggccgcg 192
               |||||||||||||||
Sbjct: 2054662 gcggcgctggccgcg 2054648






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 187     gccgcgacgacgatt 201
               |||||||||||||||
Sbjct: 2250781 gccgcgacgacgatt 2250795






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 509     gccgccagcggcgct 523
               |||||||||||||||
Sbjct: 2315692 gccgccagcggcgct 2315706






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 525     ccttcgacgccatcg 539
               |||||||||||||||
Sbjct: 2323495 ccttcgacgccatcg 2323509






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 157     tgcaggccgctgccg 171
               |||||||||||||||
Sbjct: 2556400 tgcaggccgctgccg 2556414






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 177     cgcggcgctggccgc 191
               |||||||||||||||
Sbjct: 2613206 cgcggcgctggccgc 2613192






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 637     ggcccctggccgcct 651
               |||||||||||||||
Sbjct: 2674442 ggcccctggccgcct 2674428






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 180     ggcgctggccgcgac 194
               |||||||||||||||
Sbjct: 2935956 ggcgctggccgcgac 2935970






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 482     gccctgatcggcggc 496
               |||||||||||||||
Sbjct: 3006992 gccctgatcggcggc 3006978






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 159     caggccgctgccgag 173
               |||||||||||||||
Sbjct: 3043379 caggccgctgccgag 3043365






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 509     gccgccagcggcgct 523
               |||||||||||||||
Sbjct: 3070305 gccgccagcggcgct 3070319






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 508     ggccgccagcggcgc 522
               |||||||||||||||
Sbjct: 3213913 ggccgccagcggcgc 3213927






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 508     ggccgccagcggcgc 522
               |||||||||||||||
Sbjct: 3577584 ggccgccagcggcgc 3577598






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 156     ttgcaggccgctgcc 170
               |||||||||||||||
Sbjct: 3643068 ttgcaggccgctgcc 3643054






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 504     gtacggccgccagcg 518
               |||||||||||||||
Sbjct: 3650306 gtacggccgccagcg 3650292






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 388     ccggcgcagaccggc 402
               |||||||||||||||
Sbjct: 3671084 ccggcgcagaccggc 3671070






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 525     ccttcgacgccatcg 539
               |||||||||||||||
Sbjct: 3871519 ccttcgacgccatcg 3871533






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 525     ccttcgacgccatcg 539
               |||||||||||||||
Sbjct: 3897120 ccttcgacgccatcg 3897134






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 173     gcgtcgcggcgctggccgc 191
               |||| ||||||||||||||
Sbjct: 3921162 gcgtggcggcgctggccgc 3921144






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 614     gctgcctgcgcgccttcaa 632
               |||||||||||| ||||||
Sbjct: 4007553 gctgcctgcgcgacttcaa 4007535






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 180     ggcgctggccgcgac 194
               |||||||||||||||
Sbjct: 4086395 ggcgctggccgcgac 4086409






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 617     gcctgcgcgccttca 631
               |||||||||||||||
Sbjct: 4261002 gcctgcgcgccttca 4260988






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 177     cgcggcgctggccgc 191
               |||||||||||||||
Sbjct: 4280020 cgcggcgctggccgc 4280006






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 486     tgatcggcggccgcc 500
               |||||||||||||||
Sbjct: 4310387 tgatcggcggccgcc 4310401






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 188     ccgcgacgacgattg 202
               |||||||||||||||
Sbjct: 4672277 ccgcgacgacgattg 4672291






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 175     gtcgcggcgctggcc 189
               |||||||||||||||
Sbjct: 4679146 gtcgcggcgctggcc 4679132






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 376     gcagaaccacgaccggcgc 394
               ||||||| |||||||||||
Sbjct: 4814381 gcagaactacgaccggcgc 4814363






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 601     gcggcagtggtctgctgcc 619
               |||||||||||| ||||||
Sbjct: 4852767 gcggcagtggtcggctgcc 4852785






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 436     cagcgattggcaacggcgc 454
               ||||||||||| |||||||
Sbjct: 5026001 cagcgattggcgacggcgc 5026019






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 173     gcgtcgcggcgctgg 187
               |||||||||||||||
Sbjct: 5190927 gcgtcgcggcgctgg 5190941






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 158     gcaggccgctgccga 172
               |||||||||||||||
Sbjct: 5301683 gcaggccgctgccga 5301697






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 158     gcaggccgctgccga 172
               |||||||||||||||
Sbjct: 5410034 gcaggccgctgccga 5410048






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 514     cagcggcgcttcctt 528
               |||||||||||||||
Sbjct: 5411302 cagcggcgcttcctt 5411316






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 176     tcgcggcgctggccg 190
               |||||||||||||||
Sbjct: 5645833 tcgcggcgctggccg 5645847






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 177     cgcggcgctggccgc 191
               |||||||||||||||
Sbjct: 5662783 cgcggcgctggccgc 5662769






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 176     tcgcggcgctggccg 190
               |||||||||||||||
Sbjct: 5857948 tcgcggcgctggccg 5857934






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 177     cgcggcgctggccgc 191
               |||||||||||||||
Sbjct: 5888962 cgcggcgctggccgc 5888948






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 183     gctggccgcgacgac 197
               |||||||||||||||
Sbjct: 6181859 gctggccgcgacgac 6181845






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 176     tcgcggcgctggccg 190
               |||||||||||||||
Sbjct: 6332273 tcgcggcgctggccg 6332259






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 351     cctcccggcggtccgggcc 369
               |||||||||||||| ||||
Sbjct: 6374440 cctcccggcggtcctggcc 6374458






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 490     cggcggccgccagcg 504
               |||||||||||||||
Sbjct: 6381798 cggcggccgccagcg 6381784






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 114     cgagcgcgcctcgat 128
               |||||||||||||||
Sbjct: 6390667 cgagcgcgcctcgat 6390681






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 242     ggcacgcctggccag 256
               |||||||||||||||
Sbjct: 6490000 ggcacgcctggccag 6489986






 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 617     gcctgcgcgccttca 631
               |||||||||||||||
Sbjct: 6496376 gcctgcgcgccttca 6496390






  Database: pa14
    Posted date:  Jan 15, 2004  3:01 PM
  Number of letters in database: 6,534,396
  Number of sequences in database:  1
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9849
Number of Sequences: 1
Number of extensions: 9849
Number of successful extensions: 112
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 111
length of query: 908
length of database: 6,534,396
effective HSP length: 16
effective length of query: 892
effective length of database: 6,534,380
effective search space: 5828666960
effective search space used: 5828666960
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)