BLAST Search Results

BLASTN 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: pa14 
           1 sequences; 6,534,396 total letters



Query= 
         (1015 letters)

Distribution of 95 Blast Hits on the Query Sequence



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GCTS_68                                                           400   e-111 

>GCTS_68 
          Length = 6534396

 Score =  400 bits (202), Expect = e-111
 Identities = 202/202 (100%)
 Strand = Plus / Plus

                                                                          
Query: 64     tacatgcactacggcgtggtcccggacatcctctccagcgccaagagcctgggcggcggc 123
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280946 tacatgcactacggcgtggtcccggacatcctctccagcgccaagagcctgggcggcggc 281005

                                                                          
Query: 124    ttccctatcggtgcgatgctgaccaccggcgagatcgccaagcacctgtcggtcggcacc 183
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281006 ttccctatcggtgcgatgctgaccaccggcgagatcgccaagcacctgtcggtcggcacc 281065

                                                                          
Query: 184    cacggcaccacctacggcggcaacccgctggcctcggcggtggccgaggcggcgctggac 243
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281066 cacggcaccacctacggcggcaacccgctggcctcggcggtggccgaggcggcgctggac 281125

                                    
Query: 244    gtgatcaataccccggaagtgc 265
              ||||||||||||||||||||||
Sbjct: 281126 gtgatcaataccccggaagtgc 281147




 Score = 40.1 bits (20), Expect = 0.005
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 139     atgctgaccaccggcgagatcgcc 162
               |||||||||||||||||| |||||
Sbjct: 5388797 atgctgaccaccggcgagttcgcc 5388774




 Score = 36.2 bits (18), Expect = 0.084
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 102    cgccaagagcctgggcggcggc 123
              ||||||||||||| ||||||||
Sbjct: 474149 cgccaagagcctgcgcggcggc 474170




 Score = 36.2 bits (18), Expect = 0.084
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 168    cctgtcggtcggcaccca 185
              ||||||||||||||||||
Sbjct: 898784 cctgtcggtcggcaccca 898801




 Score = 36.2 bits (18), Expect = 0.084
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 225     ggccgaggcggcgctgga 242
               ||||||||||||||||||
Sbjct: 2549748 ggccgaggcggcgctgga 2549765




 Score = 36.2 bits (18), Expect = 0.084
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 146     ccaccggcgagatcgcca 163
               ||||||||||||||||||
Sbjct: 2625819 ccaccggcgagatcgcca 2625836




 Score = 36.2 bits (18), Expect = 0.084
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 198     cggcggcaacccgctggc 215
               ||||||||||||||||||
Sbjct: 3349886 cggcggcaacccgctggc 3349869




 Score = 36.2 bits (18), Expect = 0.084
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                     
Query: 222     ggtggccgaggcggcgctggac 243
               ||||||| ||||||||||||||
Sbjct: 5145088 ggtggccaaggcggcgctggac 5145067




 Score = 34.2 bits (17), Expect = 0.33
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                               
Query: 220    gcggtggccgaggcggc 236
              |||||||||||||||||
Sbjct: 241079 gcggtggccgaggcggc 241063




 Score = 34.2 bits (17), Expect = 0.33
 Identities = 20/21 (95%)
 Strand = Plus / Plus

                                   
Query: 220    gcggtggccgaggcggcgctg 240
              |||| ||||||||||||||||
Sbjct: 648615 gcggaggccgaggcggcgctg 648635




 Score = 34.2 bits (17), Expect = 0.33
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 110     gcctgggcggcggcttc 126
               |||||||||||||||||
Sbjct: 1259626 gcctgggcggcggcttc 1259642




 Score = 34.2 bits (17), Expect = 0.33
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 212     tggcctcggcggtggcc 228
               |||||||||||||||||
Sbjct: 2217316 tggcctcggcggtggcc 2217332




 Score = 34.2 bits (17), Expect = 0.33
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 174     ggtcggcacccacggca 190
               |||||||||||||||||
Sbjct: 2233693 ggtcggcacccacggca 2233709




 Score = 34.2 bits (17), Expect = 0.33
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 209     cgctggcctcggcggtg 225
               |||||||||||||||||
Sbjct: 4485443 cgctggcctcggcggtg 4485427




 Score = 34.2 bits (17), Expect = 0.33
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 220     gcggtggccgaggcggc 236
               |||||||||||||||||
Sbjct: 4852755 gcggtggccgaggcggc 4852771




 Score = 34.2 bits (17), Expect = 0.33
 Identities = 20/21 (95%)
 Strand = Plus / Minus

                                    
Query: 151     ggcgagatcgccaagcacctg 171
               ||||||||||||||| |||||
Sbjct: 5163577 ggcgagatcgccaagaacctg 5163557




 Score = 34.2 bits (17), Expect = 0.33
 Identities = 20/21 (95%)
 Strand = Plus / Plus

                                    
Query: 185     acggcaccacctacggcggca 205
               ||||||||| |||||||||||
Sbjct: 5531132 acggcaccatctacggcggca 5531152




 Score = 34.2 bits (17), Expect = 0.33
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 210     gctggcctcggcggtgg 226
               |||||||||||||||||
Sbjct: 5566236 gctggcctcggcggtgg 5566252




 Score = 34.2 bits (17), Expect = 0.33
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 201     cggcaacccgctggcct 217
               |||||||||||||||||
Sbjct: 6283361 cggcaacccgctggcct 6283345




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                              
Query: 100    agcgccaagagcctgg 115
              ||||||||||||||||
Sbjct: 186534 agcgccaagagcctgg 186519




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                              
Query: 201    cggcaacccgctggcc 216
              ||||||||||||||||
Sbjct: 202764 cggcaacccgctggcc 202779




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                              
Query: 226    gccgaggcggcgctgg 241
              ||||||||||||||||
Sbjct: 461121 gccgaggcggcgctgg 461136




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                              
Query: 676    agatcatcatcacgat 691
              ||||||||||||||||
Sbjct: 463459 agatcatcatcacgat 463474




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                              
Query: 148    accggcgagatcgcca 163
              ||||||||||||||||
Sbjct: 677965 accggcgagatcgcca 677950




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                              
Query: 222    ggtggccgaggcggcg 237
              ||||||||||||||||
Sbjct: 764260 ggtggccgaggcggcg 764245




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                   
Query: 240     ggacgtgatcaataccccgg 259
               |||||||| |||||||||||
Sbjct: 1001591 ggacgtgaccaataccccgg 1001572




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 150     cggcgagatcgccaag 165
               ||||||||||||||||
Sbjct: 1423226 cggcgagatcgccaag 1423241




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 208     ccgctggcctcggcgg 223
               ||||||||||||||||
Sbjct: 1594311 ccgctggcctcggcgg 1594296




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 141     gctgaccaccggcgag 156
               ||||||||||||||||
Sbjct: 1622972 gctgaccaccggcgag 1622987




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 102     cgccaagagcctgggcggcg 121
               ||||||||||||| ||||||
Sbjct: 1817333 cgccaagagcctgcgcggcg 1817352




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 218     cggcggtggccgaggc 233
               ||||||||||||||||
Sbjct: 1844900 cggcggtggccgaggc 1844885




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 213     ggcctcggcggtggcc 228
               ||||||||||||||||
Sbjct: 1889495 ggcctcggcggtggcc 1889480




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 204     caacccgctggcctcg 219
               ||||||||||||||||
Sbjct: 2206015 caacccgctggcctcg 2206030




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 214     gcctcggcggtggccg 229
               ||||||||||||||||
Sbjct: 2487108 gcctcggcggtggccg 2487123




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 201     cggcaacccgctggcc 216
               ||||||||||||||||
Sbjct: 2848186 cggcaacccgctggcc 2848171




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                   
Query: 218     cggcggtggccgaggcggcg 237
               |||||||||||| |||||||
Sbjct: 3239690 cggcggtggccggggcggcg 3239671




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                   
Query: 147     caccggcgagatcgccaagc 166
               ||||| ||||||||||||||
Sbjct: 3473832 caccgtcgagatcgccaagc 3473813




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 186     cggcaccacctacggc 201
               ||||||||||||||||
Sbjct: 3514774 cggcaccacctacggc 3514759




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 232     gcggcgctggacgtga 247
               ||||||||||||||||
Sbjct: 3687082 gcggcgctggacgtga 3687067




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 175     gtcggcacccacggca 190
               ||||||||||||||||
Sbjct: 3802439 gtcggcacccacggca 3802454




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 225     ggccgaggcggcgctg 240
               ||||||||||||||||
Sbjct: 3851559 ggccgaggcggcgctg 3851544




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 236     cgctggacgtgatcaa 251
               ||||||||||||||||
Sbjct: 4332749 cgctggacgtgatcaa 4332764




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 113     tgggcggcggcttccc 128
               ||||||||||||||||
Sbjct: 4487993 tgggcggcggcttccc 4487978




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 211     ctggcctcggcggtgg 226
               ||||||||||||||||
Sbjct: 5595371 ctggcctcggcggtgg 5595386




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 222     ggtggccgaggcggcg 237
               ||||||||||||||||
Sbjct: 5681268 ggtggccgaggcggcg 5681253




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 677    gatcatcatcacgat 691
              |||||||||||||||
Sbjct: 427280 gatcatcatcacgat 427266




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 131    tcggtgcgatgctga 145
              |||||||||||||||
Sbjct: 443257 tcggtgcgatgctga 443271




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 157    atcgccaagcacctg 171
              |||||||||||||||
Sbjct: 698433 atcgccaagcacctg 698419




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 202    ggcaacccgctggcc 216
              |||||||||||||||
Sbjct: 728151 ggcaacccgctggcc 728137




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 182    cccacggcaccacct 196
              |||||||||||||||
Sbjct: 856413 cccacggcaccacct 856399




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 149    ccggcgagatcgcca 163
              |||||||||||||||
Sbjct: 878489 ccggcgagatcgcca 878503




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 149    ccggcgagatcgcca 163
              |||||||||||||||
Sbjct: 918947 ccggcgagatcgcca 918961




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 219    ggcggtggccgaggc 233
              |||||||||||||||
Sbjct: 997651 ggcggtggccgaggc 997637




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 237     gctggacgtgatcaa 251
               |||||||||||||||
Sbjct: 1102944 gctggacgtgatcaa 1102958




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 227     ccgaggcggcgctgg 241
               |||||||||||||||
Sbjct: 1103207 ccgaggcggcgctgg 1103221




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 193     acctacggcggcaacccgc 211
               |||| ||||||||||||||
Sbjct: 1178584 acctgcggcggcaacccgc 1178566




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 155     agatcgccaagcacc 169
               |||||||||||||||
Sbjct: 1229277 agatcgccaagcacc 1229263




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 228     cgaggcggcgctgga 242
               |||||||||||||||
Sbjct: 1520116 cgaggcggcgctgga 1520102




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 140     tgctgaccaccggcg 154
               |||||||||||||||
Sbjct: 1636171 tgctgaccaccggcg 1636157




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 213     ggcctcggcggtggc 227
               |||||||||||||||
Sbjct: 1658712 ggcctcggcggtggc 1658698




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 218     cggcggtggccgagg 232
               |||||||||||||||
Sbjct: 1733206 cggcggtggccgagg 1733192




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 230     aggcggcgctggacg 244
               |||||||||||||||
Sbjct: 1902186 aggcggcgctggacg 1902200




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 150     cggcgagatcgccaagcac 168
               |||||||||||||| ||||
Sbjct: 2034759 cggcgagatcgccatgcac 2034741




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 219     ggcggtggccgaggc 233
               |||||||||||||||
Sbjct: 2040261 ggcggtggccgaggc 2040247




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 221     cggtggccgaggcgg 235
               |||||||||||||||
Sbjct: 2112235 cggtggccgaggcgg 2112221




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 387     ggctgacgctgcgga 401
               |||||||||||||||
Sbjct: 2127401 ggctgacgctgcgga 2127415




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 201     cggcaacccgctggcctcg 219
               ||||| |||||||||||||
Sbjct: 2768135 cggcatcccgctggcctcg 2768153




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 221     cggtggccgaggcgg 235
               |||||||||||||||
Sbjct: 3108441 cggtggccgaggcgg 3108427




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 145     accaccggcgagatc 159
               |||||||||||||||
Sbjct: 3108573 accaccggcgagatc 3108559




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 197     acggcggcaacccgc 211
               |||||||||||||||
Sbjct: 3368157 acggcggcaacccgc 3368171




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 223     gtggccgaggcggcg 237
               |||||||||||||||
Sbjct: 3475294 gtggccgaggcggcg 3475308




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 106     aagagcctgggcggc 120
               |||||||||||||||
Sbjct: 3535516 aagagcctgggcggc 3535502




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 108     gagcctgggcggcgg 122
               |||||||||||||||
Sbjct: 3545884 gagcctgggcggcgg 3545870




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 213     ggcctcggcggtggc 227
               |||||||||||||||
Sbjct: 3655399 ggcctcggcggtggc 3655413




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 211     ctggcctcggcggtggccg 229
               |||||||||||| ||||||
Sbjct: 3658823 ctggcctcggcgttggccg 3658841




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 562     gcgagagccgcgacc 576
               |||||||||||||||
Sbjct: 3764734 gcgagagccgcgacc 3764720




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 110     gcctgggcggcggcttccc 128
               ||||||||||| |||||||
Sbjct: 3847915 gcctgggcggctgcttccc 3847897




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 702     ttcgtcctctattcg 716
               |||||||||||||||
Sbjct: 3910965 ttcgtcctctattcg 3910951




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 227     ccgaggcggcgctgg 241
               |||||||||||||||
Sbjct: 4020768 ccgaggcggcgctgg 4020782




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 228     cgaggcggcgctgga 242
               |||||||||||||||
Sbjct: 4223474 cgaggcggcgctgga 4223488




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 228     cgaggcggcgctgga 242
               |||||||||||||||
Sbjct: 4271497 cgaggcggcgctgga 4271483




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 139     atgctgaccaccggc 153
               |||||||||||||||
Sbjct: 4333184 atgctgaccaccggc 4333170




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 213     ggcctcggcggtggccgag 231
               ||||||||||||| |||||
Sbjct: 4372168 ggcctcggcggtgaccgag 4372150




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 195     ctacggcggcaacccgctg 213
               ||||| |||||||||||||
Sbjct: 4476262 ctacgacggcaacccgctg 4476244




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 228     cgaggcggcgctgga 242
               |||||||||||||||
Sbjct: 5124837 cgaggcggcgctgga 5124823




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 230     aggcggcgctggacg 244
               |||||||||||||||
Sbjct: 5149024 aggcggcgctggacg 5149010




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 142     ctgaccaccggcgagatcg 160
               |||||| ||||||||||||
Sbjct: 5155476 ctgaccgccggcgagatcg 5155458




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 210     gctggcctcggcggt 224
               |||||||||||||||
Sbjct: 5178003 gctggcctcggcggt 5177989




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 200     gcggcaacccgctgg 214
               |||||||||||||||
Sbjct: 5568311 gcggcaacccgctgg 5568297




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 112     ctgggcggcggcttc 126
               |||||||||||||||
Sbjct: 5746658 ctgggcggcggcttc 5746644




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 208     ccgctggcctcggcg 222
               |||||||||||||||
Sbjct: 5893923 ccgctggcctcggcg 5893909




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 150     cggcgagatcgccaa 164
               |||||||||||||||
Sbjct: 5899943 cggcgagatcgccaa 5899957




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 197     acggcggcaacccgctggc 215
               ||||| |||||||||||||
Sbjct: 6044721 acggctgcaacccgctggc 6044703




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 148     accggcgagatcgcc 162
               |||||||||||||||
Sbjct: 6452011 accggcgagatcgcc 6451997




 Score = 30.2 bits (15), Expect = 5.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 109     agcctgggcggcggc 123
               |||||||||||||||
Sbjct: 6506437 agcctgggcggcggc 6506451




  Database: pa14
    Posted date:  Jan 15, 2004  3:01 PM
  Number of letters in database: 6,534,396
  Number of sequences in database:  1
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5436
Number of Sequences: 1
Number of extensions: 5436
Number of successful extensions: 95
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 95
length of query: 1015
length of database: 6,534,396
effective HSP length: 17
effective length of query: 998
effective length of database: 6,534,379
effective search space: 6521310242
effective search space used: 6521310242
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)