BLASTN 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: pa14 
           1 sequences; 6,534,396 total letters



Query= (923 letters)

Distribution of 85 Blast Hits on the Query Sequence




                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GCTS_68                                                           618   e-177 
>GCTS_68 
          Length = 6534396

 Score =  618 bits (312), Expect = e-177
 Identities = 321/324 (99%)
 Strand = Plus / Plus

                                                                           
Query: 62      tacagcaacgaagaacgccgcaagcgcatcttcgccatcgtcggcgcctcctccggcaac 121
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6049976 tacagcaacgaagaacgccgcaagcgcatcttcgccatcgtcggcgcctcctccggcaac 6050035

                                                                           
Query: 122     ctcgtggaatggttcgacttctacgtctacgccttctgcgcgatctacttcgcaccggcc 181
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6050036 ctcgtggaatggttcgacttctacgtctacgccttctgcgcgatctacttcgcaccggcc 6050095

                                                                           
Query: 182     ttcttcccctccgacaaccccacggtgcagttgctgaacaccgccggggtcttcgccgcc 241
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6050096 ttcttcccctccgacaaccccacggtgcagttgctgaacaccgccggggtcttcgccgcc 6050155

                                                                           
Query: 242     ggcttcctcatgcgccccatcggcggctggatgttcggccgcatcgccgacaagcacggg 301
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6050156 ggcttcctcatgcgccccatcggcggctggatgttcggccgcatcgccgacaagcacggg 6050215

                                                                           
Query: 302     cgcaagaccgccatgctgatctcggtggtgatgatgtgcgccggctccctggcgatcgcc 361
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6050216 cgcaagaccgccatgctgatctcggtggtgatgatgtgcgccggctccctggcgatcgcc 6050275

                                       
Query: 362     tgcatacccacctacaccatcatc 385
               ||||| ||||||||| ||| ||||
Sbjct: 6050276 tgcatgcccacctacgccagcatc 6050299

 Score = 46.1 bits (23), Expect = 8e-05
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                          
Query: 213     tgctgaacaccgccggggtcttcgccgccggcttcctcatgcgccccatcggcggctgg 271
               ||||||||||||| |   |||||||||  |||||||| |||||||| ||||| ||||||
Sbjct: 5760282 tgctgaacaccgcagctatcttcgccgtgggcttcctgatgcgcccgatcggtggctgg 5760340

 Score = 42.1 bits (21), Expect = 0.001
 Identities = 47/53 (88%), Gaps = 2/53 (3%)
 Strand = Plus / Minus

                                                                    
Query: 232     cttcgccgccggcttcctcatgcgccccatcggcg-gctggatgttcggccgc 283
               ||||||||||||||||||  |||| ||| |||||| ||||| |||||||||||
Sbjct: 3549975 cttcgccgccggcttcctggtgcggcccttcggcgcgctgg-tgttcggccgc 3549924

 Score = 40.1 bits (20), Expect = 0.005
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 93      tcgccatcgtcggcgcctcc 112
               ||||||||||||||||||||
Sbjct: 1953559 tcgccatcgtcggcgcctcc 1953578

 Score = 40.1 bits (20), Expect = 0.005
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 231     tcttcgccgccggcttcctc 250
               ||||||||||||||||||||
Sbjct: 6334942 tcttcgccgccggcttcctc 6334923

 Score = 38.2 bits (19), Expect = 0.019
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 232     cttcgccgccggcttcctc 250
               |||||||||||||||||||
Sbjct: 1110596 cttcgccgccggcttcctc 1110614

 Score = 38.2 bits (19), Expect = 0.019
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 85      gcgcatcttcgccatcgtc 103
               |||||||||||||||||||
Sbjct: 1733926 gcgcatcttcgccatcgtc 1733944

 Score = 36.2 bits (18), Expect = 0.076
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 258    ccatcggcggctggatgt 275
              ||||||||||||||||||
Sbjct: 524517 ccatcggcggctggatgt 524500

 Score = 36.2 bits (18), Expect = 0.076
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 230     gtcttcgccgccggcttc 247
               ||||||||||||||||||
Sbjct: 1514074 gtcttcgccgccggcttc 1514057

 Score = 36.2 bits (18), Expect = 0.076
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 298     cgggcgcaagaccgccat 315
               ||||||||||||||||||
Sbjct: 6394265 cgggcgcaagaccgccat 6394282

 Score = 34.2 bits (17), Expect = 0.30
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 235     cgccgccggcttcctca 251
               |||||||||||||||||
Sbjct: 1321909 cgccgccggcttcctca 1321893

 Score = 34.2 bits (17), Expect = 0.30
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 234     tcgccgccggcttcctc 250
               |||||||||||||||||
Sbjct: 1877054 tcgccgccggcttcctc 1877070

 Score = 34.2 bits (17), Expect = 0.30
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 261     tcggcggctggatgttc 277
               |||||||||||||||||
Sbjct: 4174580 tcggcggctggatgttc 4174564

 Score = 34.2 bits (17), Expect = 0.30
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 93      tcgccatcgtcggcgcc 109
               |||||||||||||||||
Sbjct: 4939147 tcgccatcgtcggcgcc 4939163

 Score = 34.2 bits (17), Expect = 0.30
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 350     ctggcgatcgcctgcat 366
               |||||||||||||||||
Sbjct: 5032480 ctggcgatcgcctgcat 5032464

 Score = 34.2 bits (17), Expect = 0.30
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 93      tcgccatcgtcggcgcc 109
               |||||||||||||||||
Sbjct: 6010524 tcgccatcgtcggcgcc 6010508

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                             
Query: 182   ttcttcccctccgaca 197
             ||||||||||||||||
Sbjct: 50088 ttcttcccctccgaca 50073

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                              
Query: 235    cgccgccggcttcctc 250
              ||||||||||||||||
Sbjct: 120047 cgccgccggcttcctc 120032

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                              
Query: 229    ggtcttcgccgccggc 244
              ||||||||||||||||
Sbjct: 347250 ggtcttcgccgccggc 347235

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                              
Query: 232    cttcgccgccggcttc 247
              ||||||||||||||||
Sbjct: 411354 cttcgccgccggcttc 411369

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 314     atgctgatctcggtgg 329
               ||||||||||||||||
Sbjct: 1075505 atgctgatctcggtgg 1075490

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 232     cttcgccgccggcttc 247
               ||||||||||||||||
Sbjct: 1536462 cttcgccgccggcttc 1536477

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                   
Query: 102     tcggcgcctcctccggcaac 121
               ||||||||||| ||||||||
Sbjct: 1555386 tcggcgcctccgccggcaac 1555367

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 95      gccatcgtcggcgcct 110
               ||||||||||||||||
Sbjct: 1955310 gccatcgtcggcgcct 1955325

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 232     cttcgccgccggcttc 247
               ||||||||||||||||
Sbjct: 3047551 cttcgccgccggcttc 3047566

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 232     cttcgccgccggcttc 247
               ||||||||||||||||
Sbjct: 3248237 cttcgccgccggcttc 3248252

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 94      cgccatcgtcggcgcc 109
               ||||||||||||||||
Sbjct: 3320535 cgccatcgtcggcgcc 3320550

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                   
Query: 231     tcttcgccgccggcttcctc 250
               |||||||||||||| |||||
Sbjct: 3883706 tcttcgccgccggcatcctc 3883687

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 319     gatctcggtggtgatg 334
               ||||||||||||||||
Sbjct: 5179420 gatctcggtggtgatg 5179405

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 292     caagcacgggcgcaagaccg 311
               |||| |||||||||||||||
Sbjct: 5372091 caaggacgggcgcaagaccg 5372110

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 332     atgatgtgcgccggct 347
               ||||||||||||||||
Sbjct: 5438758 atgatgtgcgccggct 5438773

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 34/40 (85%)
 Strand = Plus / Plus

                                                       
Query: 115     cggcaacctcgtggaatggttcgacttctacgtctacgcc 154
               ||||||||| || || |||| |||||  ||||||||||||
Sbjct: 5760184 cggcaacctggtcgagtggtacgactggtacgtctacgcc 5760223

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 222     ccgccggggtcttcgccgcc 241
               ||||||| ||||||||||||
Sbjct: 5870766 ccgccggcgtcttcgccgcc 5870785

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 235     cgccgccggcttcctc 250
               ||||||||||||||||
Sbjct: 6147384 cgccgccggcttcctc 6147369

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 103    cggcgcctcctccgg 117
              |||||||||||||||
Sbjct: 542789 cggcgcctcctccgg 542775

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 321    tctcggtggtgatga 335
              |||||||||||||||
Sbjct: 759175 tctcggtggtgatga 759189

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 93     tcgccatcgtcggcg 107
              |||||||||||||||
Sbjct: 900268 tcgccatcgtcggcg 900282

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                 
Query: 256    ccccatcggcggctggatg 274
              ||||||||||| |||||||
Sbjct: 913061 ccccatcggcgcctggatg 913079

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 343     cggctccctggcgatcgcc 361
               |||| ||||||||||||||
Sbjct: 1108211 cggcaccctggcgatcgcc 1108229

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 151     cgccttctgcgcgat 165
               |||||||||||||||
Sbjct: 1174218 cgccttctgcgcgat 1174204

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 197     aaccccacggtgcagttgc 215
               |||| ||||||||||||||
Sbjct: 1919352 aacctcacggtgcagttgc 1919334

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 322     ctcggtggtgatgatgtgc 340
               ||||||| |||||||||||
Sbjct: 2148600 ctcggtgttgatgatgtgc 2148618

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 315     tgctgatctcggtgg 329
               |||||||||||||||
Sbjct: 2176448 tgctgatctcggtgg 2176434

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 88      catcttcgccatcgtcggc 106
               ||||||||||||| |||||
Sbjct: 2207799 catcttcgccatcctcggc 2207817

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 151     cgccttctgcgcgat 165
               |||||||||||||||
Sbjct: 2329399 cgccttctgcgcgat 2329413

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 276     tcggccgcatcgccgacaa 294
               |||||||||||| ||||||
Sbjct: 2514417 tcggccgcatcggcgacaa 2514435

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 90      tcttcgccatcgtcg 104
               |||||||||||||||
Sbjct: 2980119 tcttcgccatcgtcg 2980133

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 260     atcggcggctggatg 274
               |||||||||||||||
Sbjct: 3006605 atcggcggctggatg 3006591

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 98      atcgtcggcgcctcc 112
               |||||||||||||||
Sbjct: 3202620 atcgtcggcgcctcc 3202634

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 95      gccatcgtcggcgcc 109
               |||||||||||||||
Sbjct: 3248529 gccatcgtcggcgcc 3248543

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 351     tggcgatcgcctgca 365
               |||||||||||||||
Sbjct: 3273113 tggcgatcgcctgca 3273127

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 308     accgccatgctgatc 322
               |||||||||||||||
Sbjct: 3286581 accgccatgctgatc 3286595

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 95      gccatcgtcggcgcc 109
               |||||||||||||||
Sbjct: 3485706 gccatcgtcggcgcc 3485692

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 235     cgccgccggcttcct 249
               |||||||||||||||
Sbjct: 3513856 cgccgccggcttcct 3513842

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 21/23 (91%)
 Strand = Plus / Plus

                                      
Query: 309     ccgccatgctgatctcggtggtg 331
               ||||||||||| || ||||||||
Sbjct: 3780834 ccgccatgctggtcacggtggtg 3780856

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 93      tcgccatcgtcggcg 107
               |||||||||||||||
Sbjct: 3858301 tcgccatcgtcggcg 3858315

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 308     accgccatgctgatc 322
               |||||||||||||||
Sbjct: 3910575 accgccatgctgatc 3910561

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 111     cctccggcaacctcg 125
               |||||||||||||||
Sbjct: 4100570 cctccggcaacctcg 4100584

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 235     cgccgccggcttcct 249
               |||||||||||||||
Sbjct: 4156953 cgccgccggcttcct 4156939

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 341     gccggctccctggcg 355
               |||||||||||||||
Sbjct: 4584135 gccggctccctggcg 4584121

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 206     gtgcagttgctgaacaccg 224
               |||||||||||||| ||||
Sbjct: 4655406 gtgcagttgctgaagaccg 4655424

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 273     tgttcggccgcatcg 287
               |||||||||||||||
Sbjct: 4660662 tgttcggccgcatcg 4660648

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 262     cggcggctggatgttcggc 280
               |||| ||||||||||||||
Sbjct: 4664392 cggcagctggatgttcggc 4664410

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 208     gcagttgctgaacac 222
               |||||||||||||||
Sbjct: 4668865 gcagttgctgaacac 4668879

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 350     ctggcgatcgcctgc 364
               |||||||||||||||
Sbjct: 4768310 ctggcgatcgcctgc 4768324

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 315     tgctgatctcggtgg 329
               |||||||||||||||
Sbjct: 4835514 tgctgatctcggtgg 4835500

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 274     gttcggccgcatcgc 288
               |||||||||||||||
Sbjct: 4866759 gttcggccgcatcgc 4866745

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 80      cgcaagcgcatcttcgcca 98
               |||| ||||||||||||||
Sbjct: 4952828 cgcacgcgcatcttcgcca 4952846

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 348     ccctggcgatcgcct 362
               |||||||||||||||
Sbjct: 5153240 ccctggcgatcgcct 5153254

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 93      tcgccatcgtcggcg 107
               |||||||||||||||
Sbjct: 5201686 tcgccatcgtcggcg 5201672

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 93      tcgccatcgtcggcgcctc 111
               |||| ||||||||||||||
Sbjct: 5277915 tcgcgatcgtcggcgcctc 5277897

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 87      gcatcttcgccatcg 101
               |||||||||||||||
Sbjct: 5296305 gcatcttcgccatcg 5296291

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 352     ggcgatcgcctgcat 366
               |||||||||||||||
Sbjct: 5309003 ggcgatcgcctgcat 5308989

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 282     gcatcgccgacaagc 296
               |||||||||||||||
Sbjct: 5336807 gcatcgccgacaagc 5336821

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 235     cgccgccggcttcct 249
               |||||||||||||||
Sbjct: 5385594 cgccgccggcttcct 5385580

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 236     gccgccggcttcctc 250
               |||||||||||||||
Sbjct: 5391140 gccgccggcttcctc 5391154

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 232     cttcgccgccggctt 246
               |||||||||||||||
Sbjct: 5451207 cttcgccgccggctt 5451221

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 232     cttcgccgccggctt 246
               |||||||||||||||
Sbjct: 5451357 cttcgccgccggctt 5451371

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 351     tggcgatcgcctgca 365
               |||||||||||||||
Sbjct: 5459562 tggcgatcgcctgca 5459548

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 281     cgcatcgccgacaag 295
               |||||||||||||||
Sbjct: 5650916 cgcatcgccgacaag 5650930

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 351     tggcgatcgcctgca 365
               |||||||||||||||
Sbjct: 6022721 tggcgatcgcctgca 6022707

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 90      tcttcgccatcgtcg 104
               |||||||||||||||
Sbjct: 6070301 tcttcgccatcgtcg 6070287

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 93      tcgccatcgtcggcg 107
               |||||||||||||||
Sbjct: 6258745 tcgccatcgtcggcg 6258759

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 224     gccggggtcttcgcc 238
               |||||||||||||||
Sbjct: 6384809 gccggggtcttcgcc 6384823

 Score = 30.2 bits (15), Expect = 4.7
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 304     caagaccgccatgctgatc 322
               ||||||||||| |||||||
Sbjct: 6453979 caagaccgccaagctgatc 6453997
  Database: pa14
    Posted date:  Jan 15, 2004  3:01 PM
  Number of letters in database: 6,534,396
  Number of sequences in database:  1
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5255
Number of Sequences: 1
Number of extensions: 5255
Number of successful extensions: 85
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 85
length of query: 923
length of database: 6,534,396
effective HSP length: 16
effective length of query: 907
effective length of database: 6,534,380
effective search space: 5926682660
effective search space used: 5926682660
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)