BLAST Search Results

BLASTN 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: pa14 
           1 sequences; 6,534,396 total letters



Query= 
         (483 letters)

Distribution of 141 Blast Hits on the Query Sequence



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GCTS_68                                                           478   e-135 

>GCTS_68 
          Length = 6534396

 Score =  478 bits (241), Expect = e-135
 Identities = 241/241 (100%)
 Strand = Plus / Plus

                                                                           
Query: 243     cgagaactgctgctgcgggcgcggatcaacgatgcggcgcgggcggtgatgctggcatac 302
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6491607 cgagaactgctgctgcgggcgcggatcaacgatgcggcgcgggcggtgatgctggcatac 6491666

                                                                           
Query: 303     gccagcggtgccgatctcgaccagatcggtgccggcttcaatgtgcagcgtttgctgatc 362
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6491667 gccagcggtgccgatctcgaccagatcggtgccggcttcaatgtgcagcgtttgctgatc 6491726

                                                                           
Query: 363     aggcccgctcagcccgaggcggtaccgccggtggaggcgcagtacgagagcgacaagtcg 422
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6491727 aggcccgctcagcccgaggcggtaccgccggtggaggcgcagtacgagagcgacaagtcg 6491786

                                                                           
Query: 423     ctgcgcaatcgcatccagctcgcgttcgagcagctatccgtcgcaggaccgcggaacgcc 482
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6491787 ctgcgcaatcgcatccagctcgcgttcgagcagctatccgtcgcaggaccgcggaacgcc 6491846

                
Query: 483     t 483
               |
Sbjct: 6491847 t 6491847




 Score =  315 bits (159), Expect = 3e-86
 Identities = 162/163 (99%)
 Strand = Plus / Plus

                                                                           
Query: 60      tatggaggtctcggcgtgatcatcgatctttcccagttgccggagccagaggttatcgaa 119
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6491424 tatggaggtctcggcgtgatcatcgatctttcccagttgccggagccagaggttatcgaa 6491483

                                                                           
Query: 120     aacctcgatttcgagacgatttaccaagagctgttgggcgacttccgcgaagccatggct 179
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6491484 aacctcgatttcgagacgatttaccaagagctgttgggcgacttccgcgaagccatggct 6491543

                                                          
Query: 180     ggcgaatggacagcggaggtggagtcggatacggttctcaagc 222
               |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 6491544 ggcgaatggacagcggaggtggagtcggatccggttctcaagc 6491586




 Score = 34.2 bits (17), Expect = 0.16
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 247     aactgctgctgcgggcg 263
               |||||||||||||||||
Sbjct: 1886915 aactgctgctgcgggcg 1886899




 Score = 34.2 bits (17), Expect = 0.16
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 440     gctcgcgttcgagcagc 456
               |||||||||||||||||
Sbjct: 1929114 gctcgcgttcgagcagc 1929098




 Score = 34.2 bits (17), Expect = 0.16
 Identities = 20/21 (95%)
 Strand = Plus / Plus

                                    
Query: 382     cggtaccgccggtggaggcgc 402
               |||| ||||||||||||||||
Sbjct: 5997758 cggtgccgccggtggaggcgc 5997778




 Score = 32.2 bits (16), Expect = 0.61
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                              
Query: 388    cgccggtggaggcgca 403
              ||||||||||||||||
Sbjct: 187326 cgccggtggaggcgca 187341




 Score = 32.2 bits (16), Expect = 0.61
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 442     tcgcgttcgagcagct 457
               ||||||||||||||||
Sbjct: 2325239 tcgcgttcgagcagct 2325254




 Score = 32.2 bits (16), Expect = 0.61
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 352     gtttgctgatcaggcc 367
               ||||||||||||||||
Sbjct: 4334614 gtttgctgatcaggcc 4334599




 Score = 32.2 bits (16), Expect = 0.61
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 277     cggcgcgggcggtgat 292
               ||||||||||||||||
Sbjct: 5558589 cggcgcgggcggtgat 5558604




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 432    cgcatccagctcgcg 446
              |||||||||||||||
Sbjct: 159932 cgcatccagctcgcg 159918




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 249    ctgctgctgcgggcg 263
              |||||||||||||||
Sbjct: 448895 ctgctgctgcgggcg 448909




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 260    ggcgcggatcaacga 274
              |||||||||||||||
Sbjct: 593865 ggcgcggatcaacga 593879




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 276    gcggcgcgggcggtg 290
              |||||||||||||||
Sbjct: 716776 gcggcgcgggcggtg 716790




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 272    cgatgcggcgcgggc 286
              |||||||||||||||
Sbjct: 917662 cgatgcggcgcgggc 917676




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 255     ctgcgggcgcggatc 269
               |||||||||||||||
Sbjct: 1131582 ctgcgggcgcggatc 1131596




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 276     gcggcgcgggcggtg 290
               |||||||||||||||
Sbjct: 1309242 gcggcgcgggcggtg 1309256




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 260     ggcgcggatcaacga 274
               |||||||||||||||
Sbjct: 1385712 ggcgcggatcaacga 1385698




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 164     ccgcgaagccatggc 178
               |||||||||||||||
Sbjct: 1813880 ccgcgaagccatggc 1813894




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 430     atcgcatccagctcg 444
               |||||||||||||||
Sbjct: 2190452 atcgcatccagctcg 2190438




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 152     gttgggcgacttccg 166
               |||||||||||||||
Sbjct: 2346458 gttgggcgacttccg 2346444




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 246     gaactgctgctgcgg 260
               |||||||||||||||
Sbjct: 2413535 gaactgctgctgcgg 2413521




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 171     gccatggctggcgaa 185
               |||||||||||||||
Sbjct: 2539393 gccatggctggcgaa 2539379




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 246     gaactgctgctgcgg 260
               |||||||||||||||
Sbjct: 2542850 gaactgctgctgcgg 2542864




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 442     tcgcgttcgagcagc 456
               |||||||||||||||
Sbjct: 2600265 tcgcgttcgagcagc 2600251




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 308     cggtgccgatctcga 322
               |||||||||||||||
Sbjct: 2732204 cggtgccgatctcga 2732190




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 246     gaactgctgctgcgg 260
               |||||||||||||||
Sbjct: 2780620 gaactgctgctgcgg 2780634




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 308     cggtgccgatctcga 322
               |||||||||||||||
Sbjct: 2800050 cggtgccgatctcga 2800064




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 276     gcggcgcgggcggtg 290
               |||||||||||||||
Sbjct: 3600116 gcggcgcgggcggtg 3600130




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 284     ggcggtgatgctggc 298
               |||||||||||||||
Sbjct: 3830078 ggcggtgatgctggc 3830092




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 284     ggcggtgatgctggc 298
               |||||||||||||||
Sbjct: 4046729 ggcggtgatgctggc 4046743




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 399     gcgcagtacgagagc 413
               |||||||||||||||
Sbjct: 4137131 gcgcagtacgagagc 4137145




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 71      cggcgtgatcatcga 85
               |||||||||||||||
Sbjct: 4633924 cggcgtgatcatcga 4633938




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 74      cgtgatcatcgatctttcc 92
               ||||||| |||||||||||
Sbjct: 4742470 cgtgatcgtcgatctttcc 4742488




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 326     gatcggtgccggctt 340
               |||||||||||||||
Sbjct: 4834026 gatcggtgccggctt 4834012




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 302     cgccagcggtgccga 316
               |||||||||||||||
Sbjct: 5073226 cgccagcggtgccga 5073240




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 438     cagctcgcgttcgagcagc 456
               |||||||||||||| ||||
Sbjct: 5127453 cagctcgcgttcgaccagc 5127471




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 170     agccatggctggcga 184
               |||||||||||||||
Sbjct: 5136745 agccatggctggcga 5136731




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 412     gcgacaagtcgctgc 426
               |||||||||||||||
Sbjct: 5519097 gcgacaagtcgctgc 5519083




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 420     tcgctgcgcaatcgc 434
               |||||||||||||||
Sbjct: 5546002 tcgctgcgcaatcgc 5545988




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 320     cgaccagatcggtgccggc 338
               ||||| |||||||||||||
Sbjct: 5559555 cgacctgatcggtgccggc 5559537




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 423     ctgcgcaatcgcatc 437
               |||||||||||||||
Sbjct: 5622484 ctgcgcaatcgcatc 5622470




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 375     cccgaggcggtaccg 389
               |||||||||||||||
Sbjct: 5709526 cccgaggcggtaccg 5709512




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 388     cgccggtggaggcgc 402
               |||||||||||||||
Sbjct: 5770514 cgccggtggaggcgc 5770500




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 460     ccgtcgcaggaccgc 474
               |||||||||||||||
Sbjct: 5803951 ccgtcgcaggaccgc 5803965




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 437     ccagctcgcgttcga 451
               |||||||||||||||
Sbjct: 5889039 ccagctcgcgttcga 5889053




 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 390     ccggtggaggcgcag 404
               |||||||||||||||
Sbjct: 5932678 ccggtggaggcgcag 5932692




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                           
Query: 412   gcgacaagtcgctg 425
             ||||||||||||||
Sbjct: 12981 gcgacaagtcgctg 12968




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                           
Query: 391   cggtggaggcgcag 404
             ||||||||||||||
Sbjct: 58715 cggtggaggcgcag 58702




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 171    gccatggctggcga 184
              ||||||||||||||
Sbjct: 105716 gccatggctggcga 105729




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 284    ggcggtgatgctgg 297
              ||||||||||||||
Sbjct: 115699 ggcggtgatgctgg 115686




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 417    aagtcgctgcgcaa 430
              ||||||||||||||
Sbjct: 145072 aagtcgctgcgcaa 145085




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                
Query: 161    cttccgcgaagccatggc 178
              ||||||||||||| ||||
Sbjct: 171590 cttccgcgaagccgtggc 171573




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 246    gaactgctgctgcg 259
              ||||||||||||||
Sbjct: 244172 gaactgctgctgcg 244185




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 260    ggcgcggatcaacg 273
              ||||||||||||||
Sbjct: 256426 ggcgcggatcaacg 256439




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 165    cgcgaagccatggc 178
              ||||||||||||||
Sbjct: 288062 cgcgaagccatggc 288075




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 438    cagctcgcgttcga 451
              ||||||||||||||
Sbjct: 326980 cagctcgcgttcga 326967




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 442    tcgcgttcgagcag 455
              ||||||||||||||
Sbjct: 526223 tcgcgttcgagcag 526236




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 350    gcgtttgctgatca 363
              ||||||||||||||
Sbjct: 617845 gcgtttgctgatca 617858




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 260    ggcgcggatcaacg 273
              ||||||||||||||
Sbjct: 670776 ggcgcggatcaacg 670789




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 443    cgcgttcgagcagc 456
              ||||||||||||||
Sbjct: 676925 cgcgttcgagcagc 676912




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 383    ggtaccgccggtgg 396
              ||||||||||||||
Sbjct: 770761 ggtaccgccggtgg 770774




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 251    gctgctgcgggcgc 264
              ||||||||||||||
Sbjct: 829153 gctgctgcgggcgc 829166




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 246    gaactgctgctgcg 259
              ||||||||||||||
Sbjct: 836175 gaactgctgctgcg 836162




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 388     cgccggtggaggcg 401
               ||||||||||||||
Sbjct: 1049173 cgccggtggaggcg 1049160




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 17/18 (94%)
 Strand = Plus / Plus

                                 
Query: 246     gaactgctgctgcgggcg 263
               |||||| |||||||||||
Sbjct: 1051874 gaactgttgctgcgggcg 1051891




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 442     tcgcgttcgagcag 455
               ||||||||||||||
Sbjct: 1055690 tcgcgttcgagcag 1055677




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 155     gggcgacttccgcg 168
               ||||||||||||||
Sbjct: 1098010 gggcgacttccgcg 1097997




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 253     tgctgcgggcgcgg 266
               ||||||||||||||
Sbjct: 1129060 tgctgcgggcgcgg 1129073




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 366     cccgctcagcccga 379
               ||||||||||||||
Sbjct: 1187595 cccgctcagcccga 1187608




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 251     gctgctgcgggcgc 264
               ||||||||||||||
Sbjct: 1193742 gctgctgcgggcgc 1193755




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 249     ctgctgctgcgggc 262
               ||||||||||||||
Sbjct: 1212614 ctgctgctgcgggc 1212627




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 278     ggcgcgggcggtga 291
               ||||||||||||||
Sbjct: 1284216 ggcgcgggcggtga 1284229




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 441     ctcgcgttcgagca 454
               ||||||||||||||
Sbjct: 1598737 ctcgcgttcgagca 1598750




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 412     gcgacaagtcgctg 425
               ||||||||||||||
Sbjct: 1606944 gcgacaagtcgctg 1606931




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 302     cgccagcggtgccg 315
               ||||||||||||||
Sbjct: 1656498 cgccagcggtgccg 1656511




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 276     gcggcgcgggcggt 289
               ||||||||||||||
Sbjct: 1674913 gcggcgcgggcggt 1674900




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 17/18 (94%)
 Strand = Plus / Plus

                                 
Query: 68      tctcggcgtgatcatcga 85
               |||||| |||||||||||
Sbjct: 1959453 tctcggggtgatcatcga 1959470




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 285     gcggtgatgctggc 298
               ||||||||||||||
Sbjct: 2048616 gcggtgatgctggc 2048629




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 170     agccatggctggcg 183
               ||||||||||||||
Sbjct: 2138187 agccatggctggcg 2138174




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 326     gatcggtgccggct 339
               ||||||||||||||
Sbjct: 2513467 gatcggtgccggct 2513480




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 92      ccagttgccggagc 105
               ||||||||||||||
Sbjct: 2522965 ccagttgccggagc 2522952




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 147     gagctgttgggcga 160
               ||||||||||||||
Sbjct: 2525211 gagctgttgggcga 2525198




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                 
Query: 446     gttcgagcagctatccgt 463
               ||||||||||| ||||||
Sbjct: 2639037 gttcgagcagcaatccgt 2639020




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 329     cggtgccggcttca 342
               ||||||||||||||
Sbjct: 2652582 cggtgccggcttca 2652569




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 278     ggcgcgggcggtga 291
               ||||||||||||||
Sbjct: 2685498 ggcgcgggcggtga 2685485




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 388     cgccggtggaggcg 401
               ||||||||||||||
Sbjct: 2755425 cgccggtggaggcg 2755438




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 91      cccagttgccggag 104
               ||||||||||||||
Sbjct: 2797216 cccagttgccggag 2797229




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 171     gccatggctggcga 184
               ||||||||||||||
Sbjct: 2835798 gccatggctggcga 2835811




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 389     gccggtggaggcgc 402
               ||||||||||||||
Sbjct: 2844929 gccggtggaggcgc 2844916




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 251     gctgctgcgggcgc 264
               ||||||||||||||
Sbjct: 2897714 gctgctgcgggcgc 2897701




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                 
Query: 254     gctgcgggcgcggatcaa 271
               ||||| ||||||||||||
Sbjct: 2963982 gctgctggcgcggatcaa 2963965




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 277     cggcgcgggcggtg 290
               ||||||||||||||
Sbjct: 3068537 cggcgcgggcggtg 3068550




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 383     ggtaccgccggtgg 396
               ||||||||||||||
Sbjct: 3073784 ggtaccgccggtgg 3073771




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 91      cccagttgccggag 104
               ||||||||||||||
Sbjct: 3171261 cccagttgccggag 3171274




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 433     gcatccagctcgcg 446
               ||||||||||||||
Sbjct: 3178951 gcatccagctcgcg 3178964




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 246     gaactgctgctgcg 259
               ||||||||||||||
Sbjct: 3241137 gaactgctgctgcg 3241150




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 17/18 (94%)
 Strand = Plus / Plus

                                 
Query: 384     gtaccgccggtggaggcg 401
               ||||||||||||| ||||
Sbjct: 3251444 gtaccgccggtgggggcg 3251461




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 256     tgcgggcgcggatc 269
               ||||||||||||||
Sbjct: 3334236 tgcgggcgcggatc 3334223




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 308     cggtgccgatctcg 321
               ||||||||||||||
Sbjct: 3340192 cggtgccgatctcg 3340179




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 380     ggcggtaccgccgg 393
               ||||||||||||||
Sbjct: 3415942 ggcggtaccgccgg 3415929




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 380     ggcggtaccgccgg 393
               ||||||||||||||
Sbjct: 3415931 ggcggtaccgccgg 3415944




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 17/18 (94%)
 Strand = Plus / Plus

                                 
Query: 301     acgccagcggtgccgatc 318
               |||||||||||| |||||
Sbjct: 3685861 acgccagcggtgtcgatc 3685878




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 308     cggtgccgatctcg 321
               ||||||||||||||
Sbjct: 3699104 cggtgccgatctcg 3699117




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 71      cggcgtgatcatcg 84
               ||||||||||||||
Sbjct: 3912800 cggcgtgatcatcg 3912787




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 444     gcgttcgagcagct 457
               ||||||||||||||
Sbjct: 4023109 gcgttcgagcagct 4023122




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 285     gcggtgatgctggc 298
               ||||||||||||||
Sbjct: 4040879 gcggtgatgctggc 4040892




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 354     ttgctgatcaggcc 367
               ||||||||||||||
Sbjct: 4137282 ttgctgatcaggcc 4137269




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 276     gcggcgcgggcggt 289
               ||||||||||||||
Sbjct: 4154427 gcggcgcgggcggt 4154414




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 282     cgggcggtgatgct 295
               ||||||||||||||
Sbjct: 4242318 cgggcggtgatgct 4242331




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 172     ccatggctggcgaa 185
               ||||||||||||||
Sbjct: 4319571 ccatggctggcgaa 4319584




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 382     cggtaccgccggtg 395
               ||||||||||||||
Sbjct: 4343457 cggtaccgccggtg 4343470




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 318     ctcgaccagatcgg 331
               ||||||||||||||
Sbjct: 4408682 ctcgaccagatcgg 4408695




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 307     gcggtgccgatctc 320
               ||||||||||||||
Sbjct: 4440034 gcggtgccgatctc 4440047




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 169     aagccatggctggc 182
               ||||||||||||||
Sbjct: 4573783 aagccatggctggc 4573796




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 317     tctcgaccagatcg 330
               ||||||||||||||
Sbjct: 4627905 tctcgaccagatcg 4627892




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 396     gaggcgcagtacga 409
               ||||||||||||||
Sbjct: 4759326 gaggcgcagtacga 4759339




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 281     gcgggcggtgatgc 294
               ||||||||||||||
Sbjct: 4793695 gcgggcggtgatgc 4793682




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 62      tggaggtctcggcg 75
               ||||||||||||||
Sbjct: 4934828 tggaggtctcggcg 4934841




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 297     gcatacgccagcgg 310
               ||||||||||||||
Sbjct: 4948700 gcatacgccagcgg 4948687




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 231     caggcctggccacg 244
               ||||||||||||||
Sbjct: 4969238 caggcctggccacg 4969251




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 17/18 (94%)
 Strand = Plus / Plus

                                 
Query: 280     cgcgggcggtgatgctgg 297
               |||||| |||||||||||
Sbjct: 5096459 cgcgggtggtgatgctgg 5096476




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 17/18 (94%)
 Strand = Plus / Plus

                                 
Query: 75      gtgatcatcgatctttcc 92
               ||||||||||| ||||||
Sbjct: 5116395 gtgatcatcgagctttcc 5116412




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 231     caggcctggccacg 244
               ||||||||||||||
Sbjct: 5315701 caggcctggccacg 5315714




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 354     ttgctgatcaggcc 367
               ||||||||||||||
Sbjct: 5394008 ttgctgatcaggcc 5393995




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 164     ccgcgaagccatgg 177
               ||||||||||||||
Sbjct: 5424071 ccgcgaagccatgg 5424058




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 416     caagtcgctgcgca 429
               ||||||||||||||
Sbjct: 5512924 caagtcgctgcgca 5512937




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 257     gcgggcgcggatca 270
               ||||||||||||||
Sbjct: 5596126 gcgggcgcggatca 5596113




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 438     cagctcgcgttcga 451
               ||||||||||||||
Sbjct: 5666780 cagctcgcgttcga 5666793




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 308     cggtgccgatctcg 321
               ||||||||||||||
Sbjct: 5672825 cggtgccgatctcg 5672838




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 20/22 (90%)
 Strand = Plus / Minus

                                     
Query: 276     gcggcgcgggcggtgatgctgg 297
               |||||||||||| || ||||||
Sbjct: 5705679 gcggcgcgggcgatgctgctgg 5705658




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 158     cgacttccgcgaag 171
               ||||||||||||||
Sbjct: 5718465 cgacttccgcgaag 5718452




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 156     ggcgacttccgcga 169
               ||||||||||||||
Sbjct: 5996644 ggcgacttccgcga 5996631




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                 
Query: 321     gaccagatcggtgccggc 338
               |||| |||||||||||||
Sbjct: 6010761 gacctgatcggtgccggc 6010744




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 386     accgccggtggagg 399
               ||||||||||||||
Sbjct: 6250188 accgccggtggagg 6250175




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 447     ttcgagcagctatc 460
               ||||||||||||||
Sbjct: 6261270 ttcgagcagctatc 6261257




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 155     gggcgacttccgcg 168
               ||||||||||||||
Sbjct: 6343406 gggcgacttccgcg 6343419




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 263     gcggatcaacgatg 276
               ||||||||||||||
Sbjct: 6345412 gcggatcaacgatg 6345399




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 284     ggcggtgatgctgg 297
               ||||||||||||||
Sbjct: 6400763 ggcggtgatgctgg 6400776




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 256     tgcgggcgcggatc 269
               ||||||||||||||
Sbjct: 6416900 tgcgggcgcggatc 6416887




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 17/18 (94%)
 Strand = Plus / Plus

                                 
Query: 266     gatcaacgatgcggcgcg 283
               |||||||||||| |||||
Sbjct: 6506511 gatcaacgatgccgcgcg 6506528




 Score = 28.2 bits (14), Expect = 9.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 469     gaccgcggaacgcc 482
               ||||||||||||||
Sbjct: 6511500 gaccgcggaacgcc 6511487




  Database: pa14
    Posted date:  Jan 15, 2004  3:01 PM
  Number of letters in database: 6,534,396
  Number of sequences in database:  1
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4313
Number of Sequences: 1
Number of extensions: 4313
Number of successful extensions: 141
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 141
length of query: 483
length of database: 6,534,396
effective HSP length: 16
effective length of query: 467
effective length of database: 6,534,380
effective search space: 3051555460
effective search space used: 3051555460
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)