BLAST Search Results

BLASTN 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: pa14 
           1 sequences; 6,534,396 total letters



Query= 
         (442 letters)

Distribution of 94 Blast Hits on the Query Sequence



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GCTS_68                                                           688   0.0   

>GCTS_68 
          Length = 6534396

 Score =  688 bits (347), Expect = 0.0
 Identities = 374/383 (97%)
 Strand = Plus / Plus

                                                                           
Query: 60      ttatcaatacgctgcaaggtcttgttctgtctgtctggccacccgacggcgagcgtgtcc 119
               ||||||||||||||||||||||||| || ||| ||   |  |||||||||||||||||||
Sbjct: 5619276 ttatcaatacgctgcaaggtcttgtactatctctcgacctgcccgacggcgagcgtgtcc 5619335

                                                                           
Query: 120     tgagcgtttcgataggactcacttccgaagcggcctacgagttcctcaaggcgatctttc 179
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5619336 tgagcgtttcgataggactcacttccgaagcggcctacgagttcctcaaggcgatctttc 5619395

                                                                           
Query: 180     tctgctcgttcggcctgatgatgagcgaagccaggaaactggacgaagaagtaagagcct 239
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5619396 tctgctcgttcggcctgatgatgagcgaagccaggaaactggacgaagaagtaagagcct 5619455

                                                                           
Query: 240     tcatatgacgaccccatgatcatcatccgactagacgtcatcctggcgaagaacaaggtc 299
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5619456 tcatatgacgaccccatgatcatcatccgactagacgtcatcctggcgaagaacaaggtc 5619515

                                                                           
Query: 300     cgctccaaggagctggcggaagccatcggtatcaccgaacagaacctgtccctgctgaag 359
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5619516 cgctccaaggagctggcggaagccatcggtatcaccgaacagaacctgtccctgctgaag 5619575

                                                                           
Query: 360     aacggcaaggtgaagggcatccgcctcgacaccctggagaagatctgcgccttcctggac 419
               ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5619576 aacggcaaggtcaagggcatccgcctcgacaccctggagaagatctgcgccttcctggac 5619635

                                      
Query: 420     tgccagccgggcgacatcctgga 442
               |||||||||||||||||||||||
Sbjct: 5619636 tgccagccgggcgacatcctgga 5619658




 Score =  111 bits (56), Expect = 8e-25
 Identities = 110/128 (85%)
 Strand = Plus / Plus

                                                                           
Query: 303     tccaaggagctggcggaagccatcggtatcaccgaacagaacctgtccctgctgaagaac 362
               |||||||| |||||  | ||||||||||||||||||||||||||||| ||||| ||| | 
Sbjct: 2521999 tccaaggacctggcccaggccatcggtatcaccgaacagaacctgtcgctgctcaagcag 2522058

                                                                           
Query: 363     ggcaaggtgaagggcatccgcctcgacaccctggagaagatctgcgccttcctggactgc 422
               |||||||| |||||||| |||||||  |||||||||   |||||||||| |||||  |||
Sbjct: 2522059 ggcaaggtaaagggcattcgcctcgctaccctggaggccatctgcgcctacctggcgtgc 2522118

                       
Query: 423     cagccggg 430
               ||||||||
Sbjct: 2522119 cagccggg 2522126




 Score = 34.2 bits (17), Expect = 0.14
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 278     catcctggcgaagaaca 294
               |||||||||||||||||
Sbjct: 5300250 catcctggcgaagaaca 5300234




 Score = 32.2 bits (16), Expect = 0.56
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 408     gccttcctggactgcc 423
               ||||||||||||||||
Sbjct: 1141767 gccttcctggactgcc 1141782




 Score = 32.2 bits (16), Expect = 0.56
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                   
Query: 351     ctgctgaagaacggcaaggt 370
               |||||| |||||||||||||
Sbjct: 1341835 ctgctggagaacggcaaggt 1341816




 Score = 32.2 bits (16), Expect = 0.56
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 422     ccagccgggcgacatc 437
               ||||||||||||||||
Sbjct: 2342662 ccagccgggcgacatc 2342677




 Score = 32.2 bits (16), Expect = 0.56
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 377     catccgcctcgacaccctgg 396
               ||||||||||| ||||||||
Sbjct: 3449772 catccgcctcgccaccctgg 3449791




 Score = 32.2 bits (16), Expect = 0.56
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 421     gccagccgggcgacatcctg 440
               |||||||||||||| |||||
Sbjct: 4387488 gccagccgggcgacgtcctg 4387507




 Score = 32.2 bits (16), Expect = 0.56
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                   
Query: 349     ccctgctgaagaacggcaag 368
               |||||||||||||| |||||
Sbjct: 5494507 ccctgctgaagaaccgcaag 5494488




 Score = 32.2 bits (16), Expect = 0.56
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 152     gcctacgagttcctcaaggc 171
               ||||||||||| ||||||||
Sbjct: 5516442 gcctacgagttgctcaaggc 5516461




 Score = 32.2 bits (16), Expect = 0.56
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 284     ggcgaagaacaaggtc 299
               ||||||||||||||||
Sbjct: 6154665 ggcgaagaacaaggtc 6154680




 Score = 30.2 bits (15), Expect = 2.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 311    gctggcggaagccat 325
              |||||||||||||||
Sbjct: 443971 gctggcggaagccat 443957




 Score = 30.2 bits (15), Expect = 2.2
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                 
Query: 384    ctcgacaccctggagaaga 402
              |||| ||||||||||||||
Sbjct: 489130 ctcgccaccctggagaaga 489148




 Score = 30.2 bits (15), Expect = 2.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 184    ctcgttcggcctgat 198
              |||||||||||||||
Sbjct: 828211 ctcgttcggcctgat 828197




 Score = 30.2 bits (15), Expect = 2.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 304    ccaaggagctggcgg 318
              |||||||||||||||
Sbjct: 833858 ccaaggagctggcgg 833872




 Score = 30.2 bits (15), Expect = 2.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 138     tcacttccgaagcgg 152
               |||||||||||||||
Sbjct: 1039566 tcacttccgaagcgg 1039552




 Score = 30.2 bits (15), Expect = 2.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 355     tgaagaacggcaagg 369
               |||||||||||||||
Sbjct: 1174385 tgaagaacggcaagg 1174399




 Score = 30.2 bits (15), Expect = 2.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 157     cgagttcctcaaggc 171
               |||||||||||||||
Sbjct: 1216444 cgagttcctcaaggc 1216458




 Score = 30.2 bits (15), Expect = 2.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 355     tgaagaacggcaagg 369
               |||||||||||||||
Sbjct: 1959385 tgaagaacggcaagg 1959371




 Score = 30.2 bits (15), Expect = 2.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 373     agggcatccgcctcg 387
               |||||||||||||||
Sbjct: 2005161 agggcatccgcctcg 2005175




 Score = 30.2 bits (15), Expect = 2.2
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 361     acggcaaggtgaagggcat 379
               |||||| ||||||||||||
Sbjct: 3707850 acggcacggtgaagggcat 3707832




 Score = 30.2 bits (15), Expect = 2.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 309     gagctggcggaagcc 323
               |||||||||||||||
Sbjct: 3849002 gagctggcggaagcc 3849016




 Score = 30.2 bits (15), Expect = 2.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 375     ggcatccgcctcgac 389
               |||||||||||||||
Sbjct: 4022028 ggcatccgcctcgac 4022014




 Score = 30.2 bits (15), Expect = 2.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 312     ctggcggaagccatc 326
               |||||||||||||||
Sbjct: 4270470 ctggcggaagccatc 4270484




 Score = 30.2 bits (15), Expect = 2.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 360     aacggcaaggtgaag 374
               |||||||||||||||
Sbjct: 4404284 aacggcaaggtgaag 4404270




 Score = 30.2 bits (15), Expect = 2.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 421     gccagccgggcgaca 435
               |||||||||||||||
Sbjct: 5010579 gccagccgggcgaca 5010565




 Score = 30.2 bits (15), Expect = 2.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 359     gaacggcaaggtgaa 373
               |||||||||||||||
Sbjct: 5214809 gaacggcaaggtgaa 5214795




 Score = 30.2 bits (15), Expect = 2.2
 Identities = 21/23 (91%)
 Strand = Plus / Plus

                                      
Query: 413     cctggactgccagccgggcgaca 435
               ||||| || ||||||||||||||
Sbjct: 5370728 cctgggctaccagccgggcgaca 5370750




 Score = 30.2 bits (15), Expect = 2.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 163     cctcaaggcgatctt 177
               |||||||||||||||
Sbjct: 5542331 cctcaaggcgatctt 5542345




 Score = 30.2 bits (15), Expect = 2.2
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 314     ggcggaagccatcggtatc 332
               ||||||||||| |||||||
Sbjct: 6137364 ggcggaagccagcggtatc 6137382




 Score = 30.2 bits (15), Expect = 2.2
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 413     cctggactgccagccgggc 431
               ||||||| |||||||||||
Sbjct: 6143098 cctggaccgccagccgggc 6143116




 Score = 30.2 bits (15), Expect = 2.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 387     gacaccctggagaag 401
               |||||||||||||||
Sbjct: 6154027 gacaccctggagaag 6154041




 Score = 30.2 bits (15), Expect = 2.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 375     ggcatccgcctcgac 389
               |||||||||||||||
Sbjct: 6276485 ggcatccgcctcgac 6276499




 Score = 30.2 bits (15), Expect = 2.2
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 361     acggcaaggtgaagg 375
               |||||||||||||||
Sbjct: 6442567 acggcaaggtgaagg 6442553




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 106    cggcgagcgtgtcc 119
              ||||||||||||||
Sbjct: 184486 cggcgagcgtgtcc 184499




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 350    cctgctgaagaacg 363
              ||||||||||||||
Sbjct: 304182 cctgctgaagaacg 304195




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 280    tcctggcgaagaac 293
              ||||||||||||||
Sbjct: 477152 tcctggcgaagaac 477165




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 307    aggagctggcggaa 320
              ||||||||||||||
Sbjct: 493342 aggagctggcggaa 493355




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 323    catcggtatcaccg 336
              ||||||||||||||
Sbjct: 587128 catcggtatcaccg 587141




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 386    cgacaccctggaga 399
              ||||||||||||||
Sbjct: 633230 cgacaccctggaga 633217




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 386    cgacaccctggaga 399
              ||||||||||||||
Sbjct: 673692 cgacaccctggaga 673705




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 350    cctgctgaagaacg 363
              ||||||||||||||
Sbjct: 714470 cctgctgaagaacg 714457




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 90     ctgtctggccaccc 103
              ||||||||||||||
Sbjct: 822745 ctgtctggccaccc 822732




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 162    tcctcaaggcgatc 175
              ||||||||||||||
Sbjct: 907079 tcctcaaggcgatc 907092




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 352    tgctgaagaacggc 365
              ||||||||||||||
Sbjct: 929942 tgctgaagaacggc 929929




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 162     tcctcaaggcgatc 175
               ||||||||||||||
Sbjct: 1029690 tcctcaaggcgatc 1029677




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 99      cacccgacggcgag 112
               ||||||||||||||
Sbjct: 1090256 cacccgacggcgag 1090243




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 280     tcctggcgaagaac 293
               ||||||||||||||
Sbjct: 1112417 tcctggcgaagaac 1112430




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 419     ctgccagccgggcg 432
               ||||||||||||||
Sbjct: 1184382 ctgccagccgggcg 1184369




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 383     cctcgacaccctgg 396
               ||||||||||||||
Sbjct: 1208730 cctcgacaccctgg 1208717




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 360     aacggcaaggtgaa 373
               ||||||||||||||
Sbjct: 1209191 aacggcaaggtgaa 1209178




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 100     acccgacggcgagc 113
               ||||||||||||||
Sbjct: 1339487 acccgacggcgagc 1339474




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 425     gccgggcgacatcc 438
               ||||||||||||||
Sbjct: 1828071 gccgggcgacatcc 1828084




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 376     gcatccgcctcgac 389
               ||||||||||||||
Sbjct: 2081806 gcatccgcctcgac 2081819




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 380     ccgcctcgacaccc 393
               ||||||||||||||
Sbjct: 2237545 ccgcctcgacaccc 2237558




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 356     gaagaacggcaagg 369
               ||||||||||||||
Sbjct: 2759429 gaagaacggcaagg 2759416




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                 
Query: 360     aacggcaaggtgaagggc 377
               ||||||||||| ||||||
Sbjct: 2929438 aacggcaaggtcaagggc 2929421




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 376     gcatccgcctcgac 389
               ||||||||||||||
Sbjct: 3108880 gcatccgcctcgac 3108867




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 376     gcatccgcctcgac 389
               ||||||||||||||
Sbjct: 3189303 gcatccgcctcgac 3189290




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 186     cgttcggcctgatg 199
               ||||||||||||||
Sbjct: 3254038 cgttcggcctgatg 3254025




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 189     tcggcctgatgatg 202
               ||||||||||||||
Sbjct: 3370918 tcggcctgatgatg 3370931




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                 
Query: 281     cctggcgaagaacaaggt 298
               ||||||||||||| ||||
Sbjct: 3506534 cctggcgaagaaccaggt 3506517




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 117     tcctgagcgtttcg 130
               ||||||||||||||
Sbjct: 3563552 tcctgagcgtttcg 3563539




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                 
Query: 377     catccgcctcgacaccct 394
               |||| |||||||||||||
Sbjct: 3762278 catcagcctcgacaccct 3762261




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 353     gctgaagaacggca 366
               ||||||||||||||
Sbjct: 3776687 gctgaagaacggca 3776700




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 356     gaagaacggcaagg 369
               ||||||||||||||
Sbjct: 3785196 gaagaacggcaagg 3785209




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 343     acctgtccctgctg 356
               ||||||||||||||
Sbjct: 3868269 acctgtccctgctg 3868282




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 385     tcgacaccctggag 398
               ||||||||||||||
Sbjct: 3914279 tcgacaccctggag 3914266




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 380     ccgcctcgacaccc 393
               ||||||||||||||
Sbjct: 3958313 ccgcctcgacaccc 3958326




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 423     cagccgggcgacat 436
               ||||||||||||||
Sbjct: 4036936 cagccgggcgacat 4036949




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 311     gctggcggaagcca 324
               ||||||||||||||
Sbjct: 4094398 gctggcggaagcca 4094385




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 422     ccagccgggcgaca 435
               ||||||||||||||
Sbjct: 4204506 ccagccgggcgaca 4204493




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 280     tcctggcgaagaac 293
               ||||||||||||||
Sbjct: 4249425 tcctggcgaagaac 4249412




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 322     ccatcggtatcacc 335
               ||||||||||||||
Sbjct: 4322804 ccatcggtatcacc 4322817




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 350     cctgctgaagaacg 363
               ||||||||||||||
Sbjct: 4356912 cctgctgaagaacg 4356925




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 139     cacttccgaagcgg 152
               ||||||||||||||
Sbjct: 4366122 cacttccgaagcgg 4366135




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 352     tgctgaagaacggc 365
               ||||||||||||||
Sbjct: 4620466 tgctgaagaacggc 4620453




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 254     catgatcatcatcc 267
               ||||||||||||||
Sbjct: 4701473 catgatcatcatcc 4701460




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 350     cctgctgaagaacg 363
               ||||||||||||||
Sbjct: 4731835 cctgctgaagaacg 4731848




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 424     agccgggcgacatc 437
               ||||||||||||||
Sbjct: 4832400 agccgggcgacatc 4832413




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 404     ctgcgccttcctgg 417
               ||||||||||||||
Sbjct: 5018741 ctgcgccttcctgg 5018754




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 349     ccctgctgaagaac 362
               ||||||||||||||
Sbjct: 5186001 ccctgctgaagaac 5186014




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 157     cgagttcctcaagg 170
               ||||||||||||||
Sbjct: 5273370 cgagttcctcaagg 5273357




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 371     gaagggcatccgcc 384
               ||||||||||||||
Sbjct: 5327268 gaagggcatccgcc 5327255




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 386     cgacaccctggaga 399
               ||||||||||||||
Sbjct: 5327499 cgacaccctggaga 5327486




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 362     cggcaaggtgaagg 375
               ||||||||||||||
Sbjct: 5451645 cggcaaggtgaagg 5451632




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 368     ggtgaagggcatcc 381
               ||||||||||||||
Sbjct: 5520815 ggtgaagggcatcc 5520802




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 190     cggcctgatgatga 203
               ||||||||||||||
Sbjct: 6061455 cggcctgatgatga 6061468




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 383     cctcgacaccctgg 396
               ||||||||||||||
Sbjct: 6105214 cctcgacaccctgg 6105201




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 157     cgagttcctcaagg 170
               ||||||||||||||
Sbjct: 6149881 cgagttcctcaagg 6149868




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 106     cggcgagcgtgtcc 119
               ||||||||||||||
Sbjct: 6310757 cggcgagcgtgtcc 6310770




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 358     agaacggcaaggtg 371
               ||||||||||||||
Sbjct: 6326770 agaacggcaaggtg 6326757




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 353     gctgaagaacggca 366
               ||||||||||||||
Sbjct: 6357869 gctgaagaacggca 6357856




 Score = 28.2 bits (14), Expect = 8.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 419     ctgccagccgggcg 432
               ||||||||||||||
Sbjct: 6472352 ctgccagccgggcg 6472365




  Database: pa14
    Posted date:  Jan 15, 2004  3:01 PM
  Number of letters in database: 6,534,396
  Number of sequences in database:  1
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3205
Number of Sequences: 1
Number of extensions: 3205
Number of successful extensions: 95
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 95
length of query: 442
length of database: 6,534,396
effective HSP length: 16
effective length of query: 426
effective length of database: 6,534,380
effective search space: 2783645880
effective search space used: 2783645880
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)