BLAST Search Results

BLASTN 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: pa14 
           1 sequences; 6,534,396 total letters



Query= 
         (231 letters)

Distribution of 102 Blast Hits on the Query Sequence



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GCTS_68                                                           321   2e-88 

>GCTS_68 
          Length = 6534396

 Score =  321 bits (162), Expect = 2e-88
 Identities = 174/178 (97%)
 Strand = Plus / Plus

                                                                           
Query: 42      tagtcggtattcaggcgcgggccgctggagcagccggccagcagcgacagggtgaaagcc 101
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5713816 tagtcggtattcaggcgcgggccgctggagcagccggccagcagcgacagggtgaaagcc 5713875

                                                                           
Query: 102     agtagaacgaacgaacgcatgatgactccgaaaaaaatgggcagcgcggtcaggcggcga 161
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5713876 agtagaacgaacgaacgcatgatgactccgaaaaaaatgggcagcgcggtcaggcggcga 5713935

                                                                         
Query: 162     tgtgcaacacgctgcgcaggttgtccaacagcataccgacgctgatcatcatctgcag 219
               ||||||||||||||||||||||||||||||||||| ||||||||| ||| ||| ||||
Sbjct: 5713936 tgtgcaacacgctgcgcaggttgtccaacagcatatcgacgctgagcatgatcagcag 5713993




 Score = 38.2 bits (19), Expect = 0.005
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 79      ccagcagcgacagggtgaa 97
               |||||||||||||||||||
Sbjct: 2806346 ccagcagcgacagggtgaa 2806364




 Score = 38.2 bits (19), Expect = 0.005
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 69      gagcagccggccagcagcgacag 91
               |||||| ||||||||||||||||
Sbjct: 4282246 gagcaggcggccagcagcgacag 4282224




 Score = 36.2 bits (18), Expect = 0.018
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                         
Query: 67      tggagcagccggccagcagcgacagg 92
               |||| |||||||||||||||| ||||
Sbjct: 1135521 tggaacagccggccagcagcgccagg 1135496




 Score = 36.2 bits (18), Expect = 0.018
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 68      ggagcagccggccagcag 85
               ||||||||||||||||||
Sbjct: 6424259 ggagcagccggccagcag 6424242




 Score = 34.2 bits (17), Expect = 0.072
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 71      gcagccggccagcagcg 87
               |||||||||||||||||
Sbjct: 3639790 gcagccggccagcagcg 3639806




 Score = 34.2 bits (17), Expect = 0.072
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 62      gccgctggagcagccgg 78
               |||||||||||||||||
Sbjct: 3777824 gccgctggagcagccgg 3777808




 Score = 32.2 bits (16), Expect = 0.28
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 67      tggagcagccggccag 82
               ||||||||||||||||
Sbjct: 2075798 tggagcagccggccag 2075783




 Score = 32.2 bits (16), Expect = 0.28
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 62      gccgctggagcagccg 77
               ||||||||||||||||
Sbjct: 2360443 gccgctggagcagccg 2360428




 Score = 32.2 bits (16), Expect = 0.28
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 71      gcagccggccagcagc 86
               ||||||||||||||||
Sbjct: 3216678 gcagccggccagcagc 3216663




 Score = 32.2 bits (16), Expect = 0.28
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 79      ccagcagcgacagggt 94
               ||||||||||||||||
Sbjct: 3664052 ccagcagcgacagggt 3664037




 Score = 32.2 bits (16), Expect = 0.28
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 142     gcagcgcggtcaggcg 157
               ||||||||||||||||
Sbjct: 5405846 gcagcgcggtcaggcg 5405861




 Score = 32.2 bits (16), Expect = 0.28
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 56      gcgcgggccgctggag 71
               ||||||||||||||||
Sbjct: 5646795 gcgcgggccgctggag 5646780




 Score = 32.2 bits (16), Expect = 0.28
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 77      ggccagcagcgacagg 92
               ||||||||||||||||
Sbjct: 5951498 ggccagcagcgacagg 5951513




 Score = 32.2 bits (16), Expect = 0.28
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 80      cagcagcgacagggtg 95
               ||||||||||||||||
Sbjct: 6183799 cagcagcgacagggtg 6183784




 Score = 32.2 bits (16), Expect = 0.28
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 62      gccgctggagcagccg 77
               ||||||||||||||||
Sbjct: 6269699 gccgctggagcagccg 6269684




 Score = 32.2 bits (16), Expect = 0.28
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 71      gcagccggccagcagc 86
               ||||||||||||||||
Sbjct: 6526047 gcagccggccagcagc 6526062




 Score = 30.2 bits (15), Expect = 1.1
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                 
Query: 74     gccggccagcagcgacagg 92
              |||||||||||||| ||||
Sbjct: 231605 gccggccagcagcggcagg 231587




 Score = 30.2 bits (15), Expect = 1.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 69     gagcagccggccagc 83
              |||||||||||||||
Sbjct: 707461 gagcagccggccagc 707475




 Score = 30.2 bits (15), Expect = 1.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 81     agcagcgacagggtg 95
              |||||||||||||||
Sbjct: 805670 agcagcgacagggtg 805684




 Score = 30.2 bits (15), Expect = 1.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 83      cagcgacagggtgaa 97
               |||||||||||||||
Sbjct: 1126298 cagcgacagggtgaa 1126284




 Score = 30.2 bits (15), Expect = 1.1
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 74      gccggccagcagcgacagg 92
               |||||||||||||| ||||
Sbjct: 1841971 gccggccagcagcgccagg 1841989




 Score = 30.2 bits (15), Expect = 1.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 69      gagcagccggccagc 83
               |||||||||||||||
Sbjct: 1923926 gagcagccggccagc 1923940




 Score = 30.2 bits (15), Expect = 1.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 197     ccgacgctgatcatc 211
               |||||||||||||||
Sbjct: 2592131 ccgacgctgatcatc 2592145




 Score = 30.2 bits (15), Expect = 1.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 64      cgctggagcagccgg 78
               |||||||||||||||
Sbjct: 2691943 cgctggagcagccgg 2691929




 Score = 30.2 bits (15), Expect = 1.1
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 167     aacacgctgcgcaggttgt 185
               ||||||| |||||||||||
Sbjct: 3078604 aacacgccgcgcaggttgt 3078622




 Score = 30.2 bits (15), Expect = 1.1
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 64      cgctggagcagccggccag 82
               |||||| ||||||||||||
Sbjct: 3276004 cgctggcgcagccggccag 3275986




 Score = 30.2 bits (15), Expect = 1.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 55      ggcgcgggccgctgg 69
               |||||||||||||||
Sbjct: 3343993 ggcgcgggccgctgg 3343979




 Score = 30.2 bits (15), Expect = 1.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 66      ctggagcagccggcc 80
               |||||||||||||||
Sbjct: 3785820 ctggagcagccggcc 3785806




 Score = 30.2 bits (15), Expect = 1.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 65      gctggagcagccggc 79
               |||||||||||||||
Sbjct: 4444381 gctggagcagccggc 4444367




 Score = 30.2 bits (15), Expect = 1.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 169     cacgctgcgcaggtt 183
               |||||||||||||||
Sbjct: 4738350 cacgctgcgcaggtt 4738364




 Score = 30.2 bits (15), Expect = 1.1
 Identities = 21/23 (91%)
 Strand = Plus / Plus

                                      
Query: 64      cgctggagcagccggccagcagc 86
               |||||| |||| |||||||||||
Sbjct: 4833028 cgctggcgcaggcggccagcagc 4833050




 Score = 30.2 bits (15), Expect = 1.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 65      gctggagcagccggc 79
               |||||||||||||||
Sbjct: 5315478 gctggagcagccggc 5315492




 Score = 30.2 bits (15), Expect = 1.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 71      gcagccggccagcag 85
               |||||||||||||||
Sbjct: 5545491 gcagccggccagcag 5545477




 Score = 30.2 bits (15), Expect = 1.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 53      caggcgcgggccgct 67
               |||||||||||||||
Sbjct: 5618121 caggcgcgggccgct 5618107




 Score = 30.2 bits (15), Expect = 1.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 62      gccgctggagcagcc 76
               |||||||||||||||
Sbjct: 5918603 gccgctggagcagcc 5918617




 Score = 30.2 bits (15), Expect = 1.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 174     tgcgcaggttgtcca 188
               |||||||||||||||
Sbjct: 6195795 tgcgcaggttgtcca 6195781




 Score = 30.2 bits (15), Expect = 1.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 78      gccagcagcgacagg 92
               |||||||||||||||
Sbjct: 6303900 gccagcagcgacagg 6303886




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 175    gcgcaggttgtcca 188
              ||||||||||||||
Sbjct: 189801 gcgcaggttgtcca 189788




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 154    ggcggcgatgtgca 167
              ||||||||||||||
Sbjct: 235966 ggcggcgatgtgca 235979




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 17/18 (94%)
 Strand = Plus / Plus

                                
Query: 171    cgctgcgcaggttgtcca 188
              ||||||||||||| ||||
Sbjct: 259770 cgctgcgcaggttttcca 259787




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                
Query: 75     ccggccagcagcgacagg 92
              ||||||||||||| ||||
Sbjct: 446569 ccggccagcagcgccagg 446552




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 76     cggccagcagcgac 89
              ||||||||||||||
Sbjct: 462939 cggccagcagcgac 462926




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 196    accgacgctgatca 209
              ||||||||||||||
Sbjct: 501200 accgacgctgatca 501187




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 68     ggagcagccggcca 81
              ||||||||||||||
Sbjct: 502199 ggagcagccggcca 502186




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 74     gccggccagcagcg 87
              ||||||||||||||
Sbjct: 513625 gccggccagcagcg 513638




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 143    cagcgcggtcaggc 156
              ||||||||||||||
Sbjct: 841593 cagcgcggtcaggc 841606




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 78      gccagcagcgacag 91
               ||||||||||||||
Sbjct: 1026540 gccagcagcgacag 1026527




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 79      ccagcagcgacagg 92
               ||||||||||||||
Sbjct: 1105517 ccagcagcgacagg 1105530




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 74      gccggccagcagcg 87
               ||||||||||||||
Sbjct: 1143297 gccggccagcagcg 1143284




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 174     tgcgcaggttgtcc 187
               ||||||||||||||
Sbjct: 1192193 tgcgcaggttgtcc 1192180




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 78      gccagcagcgacag 91
               ||||||||||||||
Sbjct: 1647015 gccagcagcgacag 1647028




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 156     cggcgatgtgcaac 169
               ||||||||||||||
Sbjct: 1822297 cggcgatgtgcaac 1822284




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 68      ggagcagccggcca 81
               ||||||||||||||
Sbjct: 2081265 ggagcagccggcca 2081252




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 17/18 (94%)
 Strand = Plus / Plus

                                 
Query: 74      gccggccagcagcgacag 91
               |||| |||||||||||||
Sbjct: 2196434 gccgaccagcagcgacag 2196451




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                 
Query: 76      cggccagcagcgacaggg 93
               ||||||||||| ||||||
Sbjct: 2240819 cggccagcagccacaggg 2240802




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 56      gcgcgggccgctgg 69
               ||||||||||||||
Sbjct: 2267676 gcgcgggccgctgg 2267663




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 72      cagccggccagcag 85
               ||||||||||||||
Sbjct: 2447906 cagccggccagcag 2447893




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 56      gcgcgggccgctgg 69
               ||||||||||||||
Sbjct: 2455763 gcgcgggccgctgg 2455776




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 152     caggcggcgatgtg 165
               ||||||||||||||
Sbjct: 2647970 caggcggcgatgtg 2647957




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 79      ccagcagcgacagg 92
               ||||||||||||||
Sbjct: 2788917 ccagcagcgacagg 2788904




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                 
Query: 57      cgcgggccgctggagcag 74
               ||||||||||||| ||||
Sbjct: 2828258 cgcgggccgctggcgcag 2828241




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 17/18 (94%)
 Strand = Plus / Plus

                                 
Query: 171     cgctgcgcaggttgtcca 188
               ||||||||||| ||||||
Sbjct: 2855300 cgctgcgcaggatgtcca 2855317




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 62      gccgctggagcagc 75
               ||||||||||||||
Sbjct: 2976844 gccgctggagcagc 2976831




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 144     agcgcggtcaggcg 157
               ||||||||||||||
Sbjct: 3116520 agcgcggtcaggcg 3116507




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 74      gccggccagcagcg 87
               ||||||||||||||
Sbjct: 3130954 gccggccagcagcg 3130941




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 68      ggagcagccggcca 81
               ||||||||||||||
Sbjct: 3189844 ggagcagccggcca 3189857




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 17/18 (94%)
 Strand = Plus / Plus

                                 
Query: 138     atgggcagcgcggtcagg 155
               |||||||||||| |||||
Sbjct: 3235825 atgggcagcgcgctcagg 3235842




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 154     ggcggcgatgtgca 167
               ||||||||||||||
Sbjct: 3319729 ggcggcgatgtgca 3319742




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 74      gccggccagcagcg 87
               ||||||||||||||
Sbjct: 3334942 gccggccagcagcg 3334929




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 177     gcaggttgtccaac 190
               ||||||||||||||
Sbjct: 3592517 gcaggttgtccaac 3592530




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 71      gcagccggccagca 84
               ||||||||||||||
Sbjct: 3666716 gcagccggccagca 3666729




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 12      tagagaccggagac 25
               ||||||||||||||
Sbjct: 3674604 tagagaccggagac 3674617




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 76      cggccagcagcgac 89
               ||||||||||||||
Sbjct: 3829117 cggccagcagcgac 3829130




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 79      ccagcagcgacagg 92
               ||||||||||||||
Sbjct: 3939221 ccagcagcgacagg 3939208




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 59      cgggccgctggagc 72
               ||||||||||||||
Sbjct: 3962465 cgggccgctggagc 3962452




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 74      gccggccagcagcg 87
               ||||||||||||||
Sbjct: 4081674 gccggccagcagcg 4081661




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 55      ggcgcgggccgctg 68
               ||||||||||||||
Sbjct: 4131848 ggcgcgggccgctg 4131835




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 171     cgctgcgcaggttg 184
               ||||||||||||||
Sbjct: 4137895 cgctgcgcaggttg 4137882




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 74      gccggccagcagcg 87
               ||||||||||||||
Sbjct: 4160149 gccggccagcagcg 4160162




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 20/22 (90%)
 Strand = Plus / Minus

                                     
Query: 155     gcggcgatgtgcaacacgctgc 176
               |||||| || ||||||||||||
Sbjct: 4161894 gcggcggtgagcaacacgctgc 4161873




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 74      gccggccagcagcg 87
               ||||||||||||||
Sbjct: 4170322 gccggccagcagcg 4170309




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                 
Query: 88      acagggtgaaagccagta 105
               ||||| ||||||||||||
Sbjct: 4477927 acaggatgaaagccagta 4477910




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 152     caggcggcgatgtg 165
               ||||||||||||||
Sbjct: 4495946 caggcggcgatgtg 4495933




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 147     gcggtcaggcggcg 160
               ||||||||||||||
Sbjct: 4549844 gcggtcaggcggcg 4549831




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 68      ggagcagccggcca 81
               ||||||||||||||
Sbjct: 4600473 ggagcagccggcca 4600460




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 175     gcgcaggttgtcca 188
               ||||||||||||||
Sbjct: 4641924 gcgcaggttgtcca 4641937




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 17/18 (94%)
 Strand = Plus / Plus

                                 
Query: 75      ccggccagcagcgacagg 92
               |||||| |||||||||||
Sbjct: 4906717 ccggccggcagcgacagg 4906734




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 74      gccggccagcagcg 87
               ||||||||||||||
Sbjct: 5022990 gccggccagcagcg 5022977




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 60      gggccgctggagca 73
               ||||||||||||||
Sbjct: 5055931 gggccgctggagca 5055944




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 140     gggcagcgcggtca 153
               ||||||||||||||
Sbjct: 5074396 gggcagcgcggtca 5074409




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 74      gccggccagcagcg 87
               ||||||||||||||
Sbjct: 5075194 gccggccagcagcg 5075207




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 74      gccggccagcagcg 87
               ||||||||||||||
Sbjct: 5425565 gccggccagcagcg 5425578




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 62      gccgctggagcagc 75
               ||||||||||||||
Sbjct: 5445416 gccgctggagcagc 5445403




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 74      gccggccagcagcg 87
               ||||||||||||||
Sbjct: 5455810 gccggccagcagcg 5455823




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 83      cagcgacagggtga 96
               ||||||||||||||
Sbjct: 5649583 cagcgacagggtga 5649596




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 73      agccggccagcagc 86
               ||||||||||||||
Sbjct: 5706027 agccggccagcagc 5706040




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 141     ggcagcgcggtcag 154
               ||||||||||||||
Sbjct: 5788100 ggcagcgcggtcag 5788113




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 74      gccggccagcagcg 87
               ||||||||||||||
Sbjct: 5884895 gccggccagcagcg 5884908




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 179     aggttgtccaacag 192
               ||||||||||||||
Sbjct: 6102776 aggttgtccaacag 6102763




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 166     caacacgctgcgca 179
               ||||||||||||||
Sbjct: 6194117 caacacgctgcgca 6194130




 Score = 28.2 bits (14), Expect = 4.4
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 196     accgacgctgatca 209
               ||||||||||||||
Sbjct: 6257763 accgacgctgatca 6257750




  Database: pa14
    Posted date:  Jan 15, 2004  3:01 PM
  Number of letters in database: 6,534,396
  Number of sequences in database:  1
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2831
Number of Sequences: 1
Number of extensions: 2831
Number of successful extensions: 102
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 102
length of query: 231
length of database: 6,534,396
effective HSP length: 15
effective length of query: 216
effective length of database: 6,534,381
effective search space: 1411426296
effective search space used: 1411426296
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)