BLAST Search Results

BLASTN 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: pa14 
           1 sequences; 6,534,396 total letters



Query= 
         (1001 letters)

Distribution of 99 Blast Hits on the Query Sequence



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GCTS_68                                                           438   e-123 

>GCTS_68 
          Length = 6534396

 Score =  438 bits (221), Expect = e-123
 Identities = 344/381 (90%), Gaps = 3/381 (0%)
 Strand = Plus / Plus

                                                                           
Query: 132     tacagtcgcgagacctactacgacaaccaggcccgggcgatggccgtgaatgccgacggc 191
               |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 5972415 tacagtcgcgagacctacgacgacaaccaggcccgggtgatggccgtgaatgccgacggc 5972474

                                                                           
Query: 192     accctgacccggcgcatggacggcacccacggcgcgttcagcagcgacagattcgccacc 251
               |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 5972475 accctgacccggcgcatggacggcacccacggcgcggtcagcagcgacagcttcgccacc 5972534

                                                                           
Query: 252     ctcggtctgagcggaacgctgcaactggccgggatgcaacatgacctgcactccgccatg 311
               ||||| |||||||||||||||||||||||||||||||||||||||||||| | || ||||
Sbjct: 5972535 ctcggcctgagcggaacgctgcaactggccgggatgcaacatgacctgcaattcggcatg 5972594

                                                                           
Query: 312     gaccactagaagcgcatgatcttccgcgccgacctgctgcgcgacagcaatacacatccg 371
               |||||| ||||||||| ||||||||||||||||||||||||||||||||| || || |||
Sbjct: 5972595 gaccacgagaagcgcaagatcttccgcgccgacctgctgcgcgacagcaagac-cagccg 5972653

                                                                           
Query: 372     cttcgacaacctcaacccggtttatggccaggtggcgacgtcacatttaggtggtcgccg 431
               ||||||| ||||| ||||||| ||||||||||||| | ||||  |    |||||||||||
Sbjct: 5972654 cttcgactacctcgacccggtctatggccaggtggtgccgtc-gacccgggtggtcgccg 5972712

                                                                           
Query: 432     gagaccgcgaacataccccactgctgctcagcgactcgctgtacttccaggactcgaacc 491
               | ||| |||| || |||     ||||| ||||||||||||||||||||||||||||| ||
Sbjct: 5972713 gcgacagcgaccagaccgacaagctgcgcagcgactcgctgtacttccaggactcgatcc 5972772

                                    
Query: 492     acccgggacgaacgctggatc 512
               | || ||||||||||||||||
Sbjct: 5972773 a-cctggacgaacgctggatc 5972792




 Score = 36.2 bits (18), Expect = 0.083
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 270     ctgcaactggccgggatg 287
               ||||||||||||||||||
Sbjct: 1025661 ctgcaactggccgggatg 1025644




 Score = 36.2 bits (18), Expect = 0.083
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 186     gacggcaccctgacccgg 203
               ||||||||||||||||||
Sbjct: 3848198 gacggcaccctgacccgg 3848181




 Score = 36.2 bits (18), Expect = 0.083
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 185     cgacggcaccctgacccg 202
               ||||||||||||||||||
Sbjct: 6386705 cgacggcaccctgacccg 6386688




 Score = 34.2 bits (17), Expect = 0.33
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 338     cgccgacctgctgcgcg 354
               |||||||||||||||||
Sbjct: 4942601 cgccgacctgctgcgcg 4942585




 Score = 34.2 bits (17), Expect = 0.33
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 339     gccgacctgctgcgcga 355
               |||||||||||||||||
Sbjct: 5102953 gccgacctgctgcgcga 5102937




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                  
Query: 340    ccgacctgctgcgcgacagc 359
              |||||||||||||| |||||
Sbjct: 433745 ccgacctgctgcgcaacagc 433764




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 146     ctactacgacaaccag 161
               ||||||||||||||||
Sbjct: 1136020 ctactacgacaaccag 1136035




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                   
Query: 338     cgccgacctgctgcgcgaca 357
               |||||| |||||||||||||
Sbjct: 1259796 cgccgaactgctgcgcgaca 1259777




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 369     ccgcttcgacaacctc 384
               ||||||||||||||||
Sbjct: 1314729 ccgcttcgacaacctc 1314714




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 338     cgccgacctgctgcgc 353
               ||||||||||||||||
Sbjct: 1396890 cgccgacctgctgcgc 1396905




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 22/24 (91%)
 Strand = Plus / Minus

                                       
Query: 564     ccagtcgtacaacgcccacatcat 587
               |||| |||||| ||||||||||||
Sbjct: 1867928 ccaggcgtacaccgcccacatcat 1867905




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 272     gcaactggccgggatg 287
               ||||||||||||||||
Sbjct: 2035551 gcaactggccgggatg 2035536




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 243     ttcgccaccctcggtc 258
               ||||||||||||||||
Sbjct: 2127395 ttcgccaccctcggtc 2127380




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 339     gccgacctgctgcgcg 354
               ||||||||||||||||
Sbjct: 2249131 gccgacctgctgcgcg 2249146




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 268     cgctgcaactggccgg 283
               ||||||||||||||||
Sbjct: 2280102 cgctgcaactggccgg 2280117




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 341     cgacctgctgcgcgac 356
               ||||||||||||||||
Sbjct: 2414977 cgacctgctgcgcgac 2414992




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 336     cgcgccgacctgctgcgcga 355
               ||||||| ||||||||||||
Sbjct: 2442730 cgcgccggcctgctgcgcga 2442749




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 339     gccgacctgctgcgcg 354
               ||||||||||||||||
Sbjct: 2652112 gccgacctgctgcgcg 2652097




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 332     cttccgcgccgacctgctgc 351
               ||||| ||||||||||||||
Sbjct: 3276276 cttccccgccgacctgctgc 3276295




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 328     tgatcttccgcgccga 343
               ||||||||||||||||
Sbjct: 3371272 tgatcttccgcgccga 3371287




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 344     cctgctgcgcgacagc 359
               ||||||||||||||||
Sbjct: 3378345 cctgctgcgcgacagc 3378360




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 344     cctgctgcgcgacagc 359
               ||||||||||||||||
Sbjct: 3493214 cctgctgcgcgacagc 3493229




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 338     cgccgacctgctgcgc 353
               ||||||||||||||||
Sbjct: 3653436 cgccgacctgctgcgc 3653421




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 338     cgccgacctgctgcgc 353
               ||||||||||||||||
Sbjct: 3808089 cgccgacctgctgcgc 3808074




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 341     cgacctgctgcgcgac 356
               ||||||||||||||||
Sbjct: 4021748 cgacctgctgcgcgac 4021763




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 341     cgacctgctgcgcgac 356
               ||||||||||||||||
Sbjct: 4070590 cgacctgctgcgcgac 4070605




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 338     cgccgacctgctgcgc 353
               ||||||||||||||||
Sbjct: 4145519 cgccgacctgctgcgc 4145534




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 335     ccgcgccgacctgctg 350
               ||||||||||||||||
Sbjct: 5286543 ccgcgccgacctgctg 5286558




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 326     catgatcttccgcgccgacc 345
               ||||| ||||||||||||||
Sbjct: 5314758 catgaacttccgcgccgacc 5314777




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 339     gccgacctgctgcgcg 354
               ||||||||||||||||
Sbjct: 5537087 gccgacctgctgcgcg 5537102




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                   
Query: 343     acctgctgcgcgacagcaat 362
               |||||||||||||| |||||
Sbjct: 5666046 acctgctgcgcgacggcaat 5666027




 Score = 32.2 bits (16), Expect = 1.3
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 470     ctgtacttccaggact 485
               ||||||||||||||||
Sbjct: 5891805 ctgtacttccaggact 5891790




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 336    cgcgccgacctgctg 350
              |||||||||||||||
Sbjct: 181901 cgcgccgacctgctg 181915




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 345    ctgctgcgcgacagc 359
              |||||||||||||||
Sbjct: 190216 ctgctgcgcgacagc 190230




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 798    acccccttttccccc 812
              |||||||||||||||
Sbjct: 387894 acccccttttccccc 387880




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 327    atgatcttccgcgcc 341
              |||||||||||||||
Sbjct: 444078 atgatcttccgcgcc 444064




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 334    tccgcgccgacctgc 348
              |||||||||||||||
Sbjct: 459592 tccgcgccgacctgc 459606




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                 
Query: 338    cgccgacctgctgcgcgac 356
              |||||| ||||||||||||
Sbjct: 499047 cgccgagctgctgcgcgac 499065




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 161    ggcccgggcgatggc 175
              |||||||||||||||
Sbjct: 691401 ggcccgggcgatggc 691387




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 341    cgacctgctgcgcga 355
              |||||||||||||||
Sbjct: 704441 cgacctgctgcgcga 704455




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 328    tgatcttccgcgccg 342
              |||||||||||||||
Sbjct: 729055 tgatcttccgcgccg 729069




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 188    cggcaccctgacccg 202
              |||||||||||||||
Sbjct: 865699 cggcaccctgacccg 865713




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 183    gccgacggcaccctg 197
              |||||||||||||||
Sbjct: 916528 gccgacggcaccctg 916542




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 299    gcactccgccatgga 313
              |||||||||||||||
Sbjct: 987167 gcactccgccatgga 987153




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 186     gacggcaccctgacc 200
               |||||||||||||||
Sbjct: 1001892 gacggcaccctgacc 1001878




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 186     gacggcaccctgacc 200
               |||||||||||||||
Sbjct: 1005416 gacggcaccctgacc 1005402




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 161     ggcccgggcgatggc 175
               |||||||||||||||
Sbjct: 1078194 ggcccgggcgatggc 1078208




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 187     acggcaccctgaccc 201
               |||||||||||||||
Sbjct: 1158096 acggcaccctgaccc 1158110




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 335     ccgcgccgacctgctgcgc 353
               |||||||||||||| ||||
Sbjct: 1244173 ccgcgccgacctgcagcgc 1244155




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 218     ccacggcgcgttcagcagc 236
               ||||||| |||||||||||
Sbjct: 1276355 ccacggcacgttcagcagc 1276337




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 341     cgacctgctgcgcga 355
               |||||||||||||||
Sbjct: 1433299 cgacctgctgcgcga 1433313




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 339     gccgacctgctgcgc 353
               |||||||||||||||
Sbjct: 1448254 gccgacctgctgcgc 1448268




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 299     gcactccgccatggaccac 317
               |||||| ||||||||||||
Sbjct: 1582766 gcactcggccatggaccac 1582748




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 453     tgctgctcagcgact 467
               |||||||||||||||
Sbjct: 1584170 tgctgctcagcgact 1584156




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 337     gcgccgacctgctgc 351
               |||||||||||||||
Sbjct: 1639311 gcgccgacctgctgc 1639297




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 340     ccgacctgctgcgcg 354
               |||||||||||||||
Sbjct: 1709191 ccgacctgctgcgcg 1709205




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 268     cgctgcaactggccg 282
               |||||||||||||||
Sbjct: 1804564 cgctgcaactggccg 1804578




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 338     cgccgacctgctgcgcgac 356
               |||| ||||||||||||||
Sbjct: 1818249 cgcctacctgctgcgcgac 1818231




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 341     cgacctgctgcgcgacagc 359
               |||||||||||||| ||||
Sbjct: 1898413 cgacctgctgcgcgccagc 1898431




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 337     gcgccgacctgctgc 351
               |||||||||||||||
Sbjct: 1914373 gcgccgacctgctgc 1914359




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 328     tgatcttccgcgccg 342
               |||||||||||||||
Sbjct: 2071517 tgatcttccgcgccg 2071503




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 183     gccgacggcaccctg 197
               |||||||||||||||
Sbjct: 2110644 gccgacggcaccctg 2110630




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 335     ccgcgccgacctgct 349
               |||||||||||||||
Sbjct: 2126422 ccgcgccgacctgct 2126436




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 341     cgacctgctgcgcga 355
               |||||||||||||||
Sbjct: 2189010 cgacctgctgcgcga 2188996




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 365     acatccgcttcgaca 379
               |||||||||||||||
Sbjct: 2452300 acatccgcttcgaca 2452314




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 342     gacctgctgcgcgac 356
               |||||||||||||||
Sbjct: 2453620 gacctgctgcgcgac 2453634




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 269     gctgcaactggccgg 283
               |||||||||||||||
Sbjct: 2511183 gctgcaactggccgg 2511169




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 301     actccgccatggacc 315
               |||||||||||||||
Sbjct: 2723246 actccgccatggacc 2723232




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 335     ccgcgccgacctgctgcgc 353
               |||| ||||||||||||||
Sbjct: 2998637 ccgccccgacctgctgcgc 2998655




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 190     gcaccctgacccggc 204
               |||||||||||||||
Sbjct: 3094157 gcaccctgacccggc 3094171




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 268     cgctgcaactggccg 282
               |||||||||||||||
Sbjct: 3123982 cgctgcaactggccg 3123968




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 190     gcaccctgacccggc 204
               |||||||||||||||
Sbjct: 3313730 gcaccctgacccggc 3313716




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 302     ctccgccatggacca 316
               |||||||||||||||
Sbjct: 3319428 ctccgccatggacca 3319442




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 269     gctgcaactggccgg 283
               |||||||||||||||
Sbjct: 3435593 gctgcaactggccgg 3435607




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 331     tcttccgcgccgacctgct 349
               ||||||||||||| |||||
Sbjct: 3602321 tcttccgcgccgagctgct 3602339




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 268     cgctgcaactggccg 282
               |||||||||||||||
Sbjct: 3663258 cgctgcaactggccg 3663272




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 258     ctgagcggaacgctg 272
               |||||||||||||||
Sbjct: 3966302 ctgagcggaacgctg 3966316




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 339     gccgacctgctgcgc 353
               |||||||||||||||
Sbjct: 4020878 gccgacctgctgcgc 4020892




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 341     cgacctgctgcgcga 355
               |||||||||||||||
Sbjct: 4162741 cgacctgctgcgcga 4162727




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 341     cgacctgctgcgcgacagc 359
               ||||||||||| |||||||
Sbjct: 4277528 cgacctgctgctcgacagc 4277546




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 330     atcttccgcgccgac 344
               |||||||||||||||
Sbjct: 4717222 atcttccgcgccgac 4717208




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 194     cctgacccggcgcat 208
               |||||||||||||||
Sbjct: 4734272 cctgacccggcgcat 4734258




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 241     gattcgccaccctcg 255
               |||||||||||||||
Sbjct: 4735967 gattcgccaccctcg 4735953




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 184     ccgacggcaccctga 198
               |||||||||||||||
Sbjct: 5015080 ccgacggcaccctga 5015066




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 343     acctgctgcgcgaca 357
               |||||||||||||||
Sbjct: 5016320 acctgctgcgcgaca 5016334




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 162     gcccgggcgatggcc 176
               |||||||||||||||
Sbjct: 5302946 gcccgggcgatggcc 5302932




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 336     cgcgccgacctgctg 350
               |||||||||||||||
Sbjct: 5306377 cgcgccgacctgctg 5306363




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 332     cttccgcgccgacct 346
               |||||||||||||||
Sbjct: 5352330 cttccgcgccgacct 5352344




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 245     cgccaccctcggtct 259
               |||||||||||||||
Sbjct: 5390467 cgccaccctcggtct 5390481




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 183     gccgacggcaccctg 197
               |||||||||||||||
Sbjct: 5507857 gccgacggcaccctg 5507843




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 336     cgcgccgacctgctgcgcg 354
               ||||||| |||||||||||
Sbjct: 5546718 cgcgccgccctgctgcgcg 5546700




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 338     cgccgacctgctgcgcgac 356
               |||| ||||||||||||||
Sbjct: 5556949 cgcctacctgctgcgcgac 5556931




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 341     cgacctgctgcgcga 355
               |||||||||||||||
Sbjct: 5880609 cgacctgctgcgcga 5880623




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 338     cgccgacctgctgcg 352
               |||||||||||||||
Sbjct: 5955223 cgccgacctgctgcg 5955209




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 337     gcgccgacctgctgcgcga 355
               ||||||| |||||||||||
Sbjct: 6046578 gcgccgatctgctgcgcga 6046560




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 341     cgacctgctgcgcga 355
               |||||||||||||||
Sbjct: 6071743 cgacctgctgcgcga 6071729




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 345     ctgctgcgcgacagc 359
               |||||||||||||||
Sbjct: 6123535 ctgctgcgcgacagc 6123521




 Score = 30.2 bits (15), Expect = 5.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 180     aatgccgacggcacc 194
               |||||||||||||||
Sbjct: 6151825 aatgccgacggcacc 6151839




  Database: pa14
    Posted date:  Jan 15, 2004  3:01 PM
  Number of letters in database: 6,534,396
  Number of sequences in database:  1
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5759
Number of Sequences: 1
Number of extensions: 5759
Number of successful extensions: 102
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 100
length of query: 1001
length of database: 6,534,396
effective HSP length: 17
effective length of query: 984
effective length of database: 6,534,379
effective search space: 6429828936
effective search space used: 6429828936
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)