BLAST Search Results

BLASTN 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: pa14 
           1 sequences; 6,534,396 total letters



Query= 
         (338 letters)

Distribution of 120 Blast Hits on the Query Sequence



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GCTS_68                                                           355   2e-98 

>GCTS_68 
          Length = 6534396

 Score =  355 bits (179), Expect = 2e-98
 Identities = 179/179 (100%)
 Strand = Plus / Minus

                                                                           
Query: 58      tactacacccagcaactgggcctgggcttcgacgagatcagcgccggcaacctgctactg 117
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6045936 tactacacccagcaactgggcctgggcttcgacgagatcagcgccggcaacctgctactg 6045877

                                                                           
Query: 118     gtcgacgaagacctcaacgtcctccacgggcacggcatggcgaatccggccaatcgcttc 177
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6045876 gtcgacgaagacctcaacgtcctccacgggcacggcatggcgaatccggccaatcgcttc 6045817

                                                                          
Query: 178     cacagctgggtctaccgcgcccgcccggacgtcaattgcatcatccatacccacccgct 236
               |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6045816 cacagctgggtctaccgcgcccgcccggacgtcaattgcatcatccatacccacccgct 6045758




 Score = 77.8 bits (39), Expect = 8e-15
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                                   
Query: 266     tacngctgcnngtctcgcacatggacctttgcccgctatacgacgaccgcgc 317
               ||| |||||  |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 6045728 taccgctgcaggtctcgcacatggacctttgcccgctatacgacgactgcgc 6045677




 Score = 34.2 bits (17), Expect = 0.11
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                               
Query: 215    gcatcatccatacccac 231
              |||||||||||||||||
Sbjct: 209320 gcatcatccatacccac 209336




 Score = 34.2 bits (17), Expect = 0.11
 Identities = 20/21 (95%)
 Strand = Plus / Plus

                                    
Query: 311     accgcgcatcatctgcaggcc 331
               |||||||| ||||||||||||
Sbjct: 4473661 accgcgcagcatctgcaggcc 4473681




 Score = 32.2 bits (16), Expect = 0.42
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                              
Query: 59     actacacccagcaact 74
              ||||||||||||||||
Sbjct: 265287 actacacccagcaact 265302




 Score = 32.2 bits (16), Expect = 0.42
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                  
Query: 65     cccagcaactgggcctgggc 84
              ||||||||||||||| ||||
Sbjct: 771816 cccagcaactgggccagggc 771835




 Score = 32.2 bits (16), Expect = 0.42
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 69      gcaactgggcctgggc 84
               ||||||||||||||||
Sbjct: 1091084 gcaactgggcctgggc 1091069




 Score = 32.2 bits (16), Expect = 0.42
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 69      gcaactgggcctgggc 84
               ||||||||||||||||
Sbjct: 1788942 gcaactgggcctgggc 1788957




 Score = 32.2 bits (16), Expect = 0.42
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 69      gcaactgggcctgggc 84
               ||||||||||||||||
Sbjct: 1789555 gcaactgggcctgggc 1789570




 Score = 32.2 bits (16), Expect = 0.42
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 98      gcgccggcaacctgct 113
               ||||||||||||||||
Sbjct: 2095338 gcgccggcaacctgct 2095323




 Score = 32.2 bits (16), Expect = 0.42
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 91      gagatcagcgccggca 106
               ||||||||||||||||
Sbjct: 2096548 gagatcagcgccggca 2096533




 Score = 32.2 bits (16), Expect = 0.42
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                   
Query: 108     cctgctactggtcgacgaag 127
               |||||| |||||||||||||
Sbjct: 2790501 cctgctgctggtcgacgaag 2790482




 Score = 32.2 bits (16), Expect = 0.42
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 84      cttcgacgagatcagc 99
               ||||||||||||||||
Sbjct: 3173365 cttcgacgagatcagc 3173350




 Score = 32.2 bits (16), Expect = 0.42
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 93      gatcagcgccggcaac 108
               ||||||||||||||||
Sbjct: 3459341 gatcagcgccggcaac 3459356




 Score = 32.2 bits (16), Expect = 0.42
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                   
Query: 78      cctgggcttcgacgagatca 97
               ||||||||||| ||||||||
Sbjct: 5045266 cctgggcttcggcgagatca 5045247




 Score = 32.2 bits (16), Expect = 0.42
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 193     cgcgcccgcccggacg 208
               ||||||||||||||||
Sbjct: 5100531 cgcgcccgcccggacg 5100546




 Score = 32.2 bits (16), Expect = 0.42
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 95      tcagcgccggcaacct 110
               ||||||||||||||||
Sbjct: 5555984 tcagcgccggcaacct 5555999




 Score = 32.2 bits (16), Expect = 0.42
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 91      gagatcagcgccggca 106
               ||||||||||||||||
Sbjct: 5848690 gagatcagcgccggca 5848705




 Score = 32.2 bits (16), Expect = 0.42
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 98      gcgccggcaacctgct 113
               ||||||||||||||||
Sbjct: 5849900 gcgccggcaacctgct 5849915




 Score = 32.2 bits (16), Expect = 0.42
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 183     ctgggtctaccgcgcc 198
               ||||||||||||||||
Sbjct: 5965768 ctgggtctaccgcgcc 5965753




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                            
Query: 99    cgccggcaacctgct 113
             |||||||||||||||
Sbjct: 32072 cgccggcaacctgct 32086




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 96     cagcgccggcaacct 110
              |||||||||||||||
Sbjct: 389326 cagcgccggcaacct 389340




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 117    ggtcgacgaagacct 131
              |||||||||||||||
Sbjct: 498861 ggtcgacgaagacct 498875




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 192    ccgcgcccgcccgga 206
              |||||||||||||||
Sbjct: 547421 ccgcgcccgcccgga 547407




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 21/23 (91%)
 Strand = Plus / Plus

                                     
Query: 90     cgagatcagcgccggcaacctgc 112
              |||| ||||||||||||| ||||
Sbjct: 861536 cgaggtcagcgccggcaagctgc 861558




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 74     tgggcctgggcttcg 88
              |||||||||||||||
Sbjct: 885555 tgggcctgggcttcg 885569




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 99     cgccggcaacctgct 113
              |||||||||||||||
Sbjct: 924146 cgccggcaacctgct 924132




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 99      cgccggcaacctgct 113
               |||||||||||||||
Sbjct: 1504816 cgccggcaacctgct 1504802




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 99      cgccggcaacctgct 113
               |||||||||||||||
Sbjct: 1655145 cgccggcaacctgct 1655159




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 65      cccagcaactgggcc 79
               |||||||||||||||
Sbjct: 1919510 cccagcaactgggcc 1919524




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 114     actggtcgacgaaga 128
               |||||||||||||||
Sbjct: 2428372 actggtcgacgaaga 2428386




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 107     acctgctactggtcgacga 125
               |||||| ||||||||||||
Sbjct: 2811781 acctgcaactggtcgacga 2811763




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 24/27 (88%)
 Strand = Plus / Minus

                                          
Query: 77      gcctgggcttcgacgagatcagcgccg 103
               |||||||| ||| || |||||||||||
Sbjct: 3109333 gcctgggcatcggcgcgatcagcgccg 3109307




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 98      gcgccggcaacctgc 112
               |||||||||||||||
Sbjct: 3610288 gcgccggcaacctgc 3610302




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 107     acctgctactggtcg 121
               |||||||||||||||
Sbjct: 3778878 acctgctactggtcg 3778892




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 76      ggcctgggcttcgac 90
               |||||||||||||||
Sbjct: 3858003 ggcctgggcttcgac 3857989




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 192     ccgcgcccgcccgga 206
               |||||||||||||||
Sbjct: 3919874 ccgcgcccgcccgga 3919888




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 75      gggcctgggcttcga 89
               |||||||||||||||
Sbjct: 4713233 gggcctgggcttcga 4713219




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 78      cctgggcttcgacga 92
               |||||||||||||||
Sbjct: 4836216 cctgggcttcgacga 4836202




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 95      tcagcgccggcaacctgct 113
               ||||||||||| |||||||
Sbjct: 4972427 tcagcgccggcgacctgct 4972445




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 77      gcctgggcttcgacg 91
               |||||||||||||||
Sbjct: 5326754 gcctgggcttcgacg 5326740




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                           
Query: 99    cgccggcaacctgc 112
             ||||||||||||||
Sbjct: 32903 cgccggcaacctgc 32916




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                           
Query: 91    gagatcagcgccgg 104
             ||||||||||||||
Sbjct: 34680 gagatcagcgccgg 34693




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                           
Query: 99    cgccggcaacctgc 112
             ||||||||||||||
Sbjct: 96720 cgccggcaacctgc 96707




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 76     ggcctgggcttcga 89
              ||||||||||||||
Sbjct: 219935 ggcctgggcttcga 219948




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 70     caactgggcctggg 83
              ||||||||||||||
Sbjct: 309393 caactgggcctggg 309406




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 95     tcagcgccggcaac 108
              ||||||||||||||
Sbjct: 431947 tcagcgccggcaac 431934




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 189    ctaccgcgcccgcc 202
              ||||||||||||||
Sbjct: 468791 ctaccgcgcccgcc 468804




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 165    ggccaatcgcttcc 178
              ||||||||||||||
Sbjct: 481658 ggccaatcgcttcc 481645




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 90     cgagatcagcgccg 103
              ||||||||||||||
Sbjct: 482537 cgagatcagcgccg 482550




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 77     gcctgggcttcgac 90
              ||||||||||||||
Sbjct: 531550 gcctgggcttcgac 531563




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 90     cgagatcagcgccg 103
              ||||||||||||||
Sbjct: 656048 cgagatcagcgccg 656061




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 87     cgacgagatcagcg 100
              ||||||||||||||
Sbjct: 897305 cgacgagatcagcg 897318




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 246     gaaggcctggccaa 259
               ||||||||||||||
Sbjct: 1052813 gaaggcctggccaa 1052800




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 100     gccggcaacctgct 113
               ||||||||||||||
Sbjct: 1114925 gccggcaacctgct 1114912




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 114     actggtcgacgaag 127
               ||||||||||||||
Sbjct: 1263130 actggtcgacgaag 1263143




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 93      gatcagcgccggca 106
               ||||||||||||||
Sbjct: 1412545 gatcagcgccggca 1412532




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 93      gatcagcgccggca 106
               ||||||||||||||
Sbjct: 1481143 gatcagcgccggca 1481130




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 95      tcagcgccggcaac 108
               ||||||||||||||
Sbjct: 1483075 tcagcgccggcaac 1483062




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 117     ggtcgacgaagacc 130
               ||||||||||||||
Sbjct: 1595048 ggtcgacgaagacc 1595035




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 94      atcagcgccggcaa 107
               ||||||||||||||
Sbjct: 1722170 atcagcgccggcaa 1722157




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 78      cctgggcttcgacg 91
               ||||||||||||||
Sbjct: 1762326 cctgggcttcgacg 1762313




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 80      tgggcttcgacgag 93
               ||||||||||||||
Sbjct: 1971057 tgggcttcgacgag 1971044




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 80      tgggcttcgacgag 93
               ||||||||||||||
Sbjct: 1974240 tgggcttcgacgag 1974227




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 69      gcaactgggcctgg 82
               ||||||||||||||
Sbjct: 2046553 gcaactgggcctgg 2046566




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 20/22 (90%)
 Strand = Plus / Plus

                                     
Query: 90      cgagatcagcgccggcaacctg 111
               |||| ||| |||||||||||||
Sbjct: 2135873 cgaggtcaccgccggcaacctg 2135894




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 69      gcaactgggcctgg 82
               ||||||||||||||
Sbjct: 2316492 gcaactgggcctgg 2316479




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 246     gaaggcctggccaa 259
               ||||||||||||||
Sbjct: 2335907 gaaggcctggccaa 2335894




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 185     gggtctaccgcgcc 198
               ||||||||||||||
Sbjct: 2355809 gggtctaccgcgcc 2355822




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 99      cgccggcaacctgc 112
               ||||||||||||||
Sbjct: 2379247 cgccggcaacctgc 2379234




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 95      tcagcgccggcaac 108
               ||||||||||||||
Sbjct: 2472500 tcagcgccggcaac 2472513




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 325     gcaggcctggccaa 338
               ||||||||||||||
Sbjct: 2486623 gcaggcctggccaa 2486610




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 146     ggcacggcatggcg 159
               ||||||||||||||
Sbjct: 2576748 ggcacggcatggcg 2576761




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 115     ctggtcgacgaaga 128
               ||||||||||||||
Sbjct: 2619785 ctggtcgacgaaga 2619772




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 76      ggcctgggcttcga 89
               ||||||||||||||
Sbjct: 2686721 ggcctgggcttcga 2686708




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 90      cgagatcagcgccg 103
               ||||||||||||||
Sbjct: 2771732 cgagatcagcgccg 2771719




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 77      gcctgggcttcgac 90
               ||||||||||||||
Sbjct: 2821851 gcctgggcttcgac 2821838




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 299     cgctatacgacgac 312
               ||||||||||||||
Sbjct: 2830931 cgctatacgacgac 2830944




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 23/26 (88%)
 Strand = Plus / Minus

                                         
Query: 88      gacgagatcagcgccggcaacctgct 113
               ||||| ||| || |||||||||||||
Sbjct: 2959208 gacgacatccgcaccggcaacctgct 2959183




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 95      tcagcgccggcaac 108
               ||||||||||||||
Sbjct: 3105350 tcagcgccggcaac 3105363




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 76      ggcctgggcttcga 89
               ||||||||||||||
Sbjct: 3140251 ggcctgggcttcga 3140264




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 83      gcttcgacgagatc 96
               ||||||||||||||
Sbjct: 3217070 gcttcgacgagatc 3217083




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 244     ctgaaggcctggcc 257
               ||||||||||||||
Sbjct: 3249277 ctgaaggcctggcc 3249264




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 99      cgccggcaacctgc 112
               ||||||||||||||
Sbjct: 3291240 cgccggcaacctgc 3291227




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 95      tcagcgccggcaac 108
               ||||||||||||||
Sbjct: 3351403 tcagcgccggcaac 3351416




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 93      gatcagcgccggca 106
               ||||||||||||||
Sbjct: 3391940 gatcagcgccggca 3391927




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 69      gcaactgggcctgg 82
               ||||||||||||||
Sbjct: 3476970 gcaactgggcctgg 3476957




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 132     caacgtcctccacg 145
               ||||||||||||||
Sbjct: 3510046 caacgtcctccacg 3510059




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 93      gatcagcgccggca 106
               ||||||||||||||
Sbjct: 3510082 gatcagcgccggca 3510069




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 68      agcaactgggcctg 81
               ||||||||||||||
Sbjct: 3520796 agcaactgggcctg 3520783




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                 
Query: 190     taccgcgcccgcccggac 207
               ||||||||||||| ||||
Sbjct: 3546389 taccgcgcccgccaggac 3546372




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 97      agcgccggcaacct 110
               ||||||||||||||
Sbjct: 3862739 agcgccggcaacct 3862752




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 313     cgcgcatcatctgc 326
               ||||||||||||||
Sbjct: 3900342 cgcgcatcatctgc 3900329




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 119     tcgacgaagacctc 132
               ||||||||||||||
Sbjct: 3972507 tcgacgaagacctc 3972520




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                 
Query: 102     cggcaacctgctactggt 119
               |||||||||||| |||||
Sbjct: 3992552 cggcaacctgctgctggt 3992535




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 78      cctgggcttcgacg 91
               ||||||||||||||
Sbjct: 4055144 cctgggcttcgacg 4055131




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 69      gcaactgggcctgg 82
               ||||||||||||||
Sbjct: 4061878 gcaactgggcctgg 4061891




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 92      agatcagcgccggc 105
               ||||||||||||||
Sbjct: 4244748 agatcagcgccggc 4244761




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 228     ccacccgctacatc 241
               ||||||||||||||
Sbjct: 4721685 ccacccgctacatc 4721672




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 93      gatcagcgccggca 106
               ||||||||||||||
Sbjct: 4738389 gatcagcgccggca 4738402




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 78      cctgggcttcgacg 91
               ||||||||||||||
Sbjct: 4821959 cctgggcttcgacg 4821946




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 325     gcaggcctggccaa 338
               ||||||||||||||
Sbjct: 4878623 gcaggcctggccaa 4878636




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 90      cgagatcagcgccg 103
               ||||||||||||||
Sbjct: 4893936 cgagatcagcgccg 4893949




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 244     ctgaaggcctggcc 257
               ||||||||||||||
Sbjct: 4992923 ctgaaggcctggcc 4992910




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 191     accgcgcccgcccg 204
               ||||||||||||||
Sbjct: 5105683 accgcgcccgcccg 5105696




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 155     tggcgaatccggcc 168
               ||||||||||||||
Sbjct: 5420155 tggcgaatccggcc 5420168




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 100     gccggcaacctgct 113
               ||||||||||||||
Sbjct: 5606095 gccggcaacctgct 5606082




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 194     gcgcccgcccggac 207
               ||||||||||||||
Sbjct: 5665347 gcgcccgcccggac 5665334




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 151     ggcatggcgaatcc 164
               ||||||||||||||
Sbjct: 5691805 ggcatggcgaatcc 5691818




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 100     gccggcaacctgct 113
               ||||||||||||||
Sbjct: 5830280 gccggcaacctgct 5830293




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 195     cgcccgcccggacg 208
               ||||||||||||||
Sbjct: 5940492 cgcccgcccggacg 5940505




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 313     cgcgcatcatctgc 326
               ||||||||||||||
Sbjct: 5993721 cgcgcatcatctgc 5993734




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 78      cctgggcttcgacg 91
               ||||||||||||||
Sbjct: 6055489 cctgggcttcgacg 6055502




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                 
Query: 96      cagcgccggcaacctgct 113
               ||||||||||| ||||||
Sbjct: 6056669 cagcgccggcaccctgct 6056652




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 92      agatcagcgccggc 105
               ||||||||||||||
Sbjct: 6071959 agatcagcgccggc 6071946




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 67      cagcaactgggcct 80
               ||||||||||||||
Sbjct: 6077604 cagcaactgggcct 6077591




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 115     ctggtcgacgaaga 128
               ||||||||||||||
Sbjct: 6282804 ctggtcgacgaaga 6282817




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 69      gcaactgggcctgg 82
               ||||||||||||||
Sbjct: 6389222 gcaactgggcctgg 6389235




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 93      gatcagcgccggca 106
               ||||||||||||||
Sbjct: 6509020 gatcagcgccggca 6509033




 Score = 28.2 bits (14), Expect = 6.6
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 74      tgggcctgggcttc 87
               ||||||||||||||
Sbjct: 6524883 tgggcctgggcttc 6524870




  Database: pa14
    Posted date:  Jan 15, 2004  3:01 PM
  Number of letters in database: 6,534,396
  Number of sequences in database:  1
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3116
Number of Sequences: 1
Number of extensions: 3116
Number of successful extensions: 120
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 120
length of query: 338
length of database: 6,534,396
effective HSP length: 16
effective length of query: 322
effective length of database: 6,534,380
effective search space: 2104070360
effective search space used: 2104070360
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)