BLAST Search Results

BLASTN 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: pa14 
           1 sequences; 6,534,396 total letters



Query= 
         (543 letters)

Distribution of 107 Blast Hits on the Query Sequence



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GCTS_68                                                           963   0.0   

>GCTS_68 
          Length = 6534396

 Score =  963 bits (486), Expect = 0.0
 Identities = 486/486 (100%)
 Strand = Plus / Plus

                                                                          
Query: 58     tacgctgatcggcggcttcgagctgtcccgcgagacctacgaccgcaccacctactccta 117
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753581 tacgctgatcggcggcttcgagctgtcccgcgagacctacgaccgcaccacctactccta 753640

                                                                          
Query: 118    caacctgggcaagttctacccggccaacggcttcgacctgcacaacccgccgggctactg 177
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753641 caacctgggcaagttctacccggccaacggcttcgacctgcacaacccgccgggctactg 753700

                                                                          
Query: 178    gaacggccccaccgacaagcgcgacagcgcgcgcaaccggaccgaactggaggtcaaggc 237
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753701 gaacggccccaccgacaagcgcgacagcgcgcgcaaccggaccgaactggaggtcaaggc 753760

                                                                          
Query: 238    gctgtacgccttcgacaccatcgccctggacgagcgctgggacctcagcctgggcctgcg 297
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753761 gctgtacgccttcgacaccatcgccctggacgagcgctgggacctcagcctgggcctgcg 753820

                                                                          
Query: 298    ctacgactggatcgacggcacctcgcggagcacgccctcaggcaagccgacggtgcgcgc 357
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753821 ctacgactggatcgacggcacctcgcggagcacgccctcaggcaagccgacggtgcgcgc 753880

                                                                          
Query: 358    cgacagttccgacggcaagctgagcacacgggcggggctggtattcaagccgctggagaa 417
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753881 cgacagttccgacggcaagctgagcacacgggcggggctggtattcaagccgctggagaa 753940

                                                                          
Query: 418    cgggcgggtgtacgtctcctacggcacctccttcaacccctcggcggaacacctggtcac 477
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753941 cgggcgggtgtacgtctcctacggcacctccttcaacccctcggcggaacacctggtcac 754000

                                                                          
Query: 478    caccggctcgggcgtgaccgaggcgaccggaggcctggcgccggagaagaacagcaccta 537
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754001 caccggctcgggcgtgaccgaggcgaccggaggcctggcgccggagaagaacagcaccta 754060

                    
Query: 538    cgagct 543
              ||||||
Sbjct: 754061 cgagct 754066




 Score = 40.1 bits (20), Expect = 0.003
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 247     cttcgacaccatcgccctgg 266
               ||||||||||||||||||||
Sbjct: 2481442 cttcgacaccatcgccctgg 2481423




 Score = 38.2 bits (19), Expect = 0.011
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 190     cgacaagcgcgacagcgcg 208
               |||||||||||||||||||
Sbjct: 3929902 cgacaagcgcgacagcgcg 3929920




 Score = 38.2 bits (19), Expect = 0.011
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 343     gccgacggtgcgcgccgac 361
               |||||||||||||||||||
Sbjct: 5109334 gccgacggtgcgcgccgac 5109352




 Score = 38.2 bits (19), Expect = 0.011
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 348     cggtgcgcgccgacagttc 366
               |||||||||||||||||||
Sbjct: 6000602 cggtgcgcgccgacagttc 6000620




 Score = 36.2 bits (18), Expect = 0.044
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                     
Query: 277     ggacctcagcctgggcctgcgc 298
               ||||||||||||| ||||||||
Sbjct: 4107356 ggacctcagcctgcgcctgcgc 4107377




 Score = 36.2 bits (18), Expect = 0.044
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 342     agccgacggtgcgcgccg 359
               ||||||||||||||||||
Sbjct: 4848394 agccgacggtgcgcgccg 4848411




 Score = 34.2 bits (17), Expect = 0.18
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                              
Query: 196   gcgcgacagcgcgcgca 212
             |||||||||||||||||
Sbjct: 16911 gcgcgacagcgcgcgca 16895




 Score = 34.2 bits (17), Expect = 0.18
 Identities = 23/25 (92%)
 Strand = Plus / Plus

                                        
Query: 122     ctgggcaagttctacccggccaacg 146
               ||||||||| || ||||||||||||
Sbjct: 2000778 ctgggcaagctcgacccggccaacg 2000802




 Score = 34.2 bits (17), Expect = 0.18
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 295     gcgctacgactggatcg 311
               |||||||||||||||||
Sbjct: 2113854 gcgctacgactggatcg 2113838




 Score = 34.2 bits (17), Expect = 0.18
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 96      acgaccgcaccacctac 112
               |||||||||||||||||
Sbjct: 2318710 acgaccgcaccacctac 2318726




 Score = 34.2 bits (17), Expect = 0.18
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 66      tcggcggcttcgagctg 82
               |||||||||||||||||
Sbjct: 2458147 tcggcggcttcgagctg 2458131




 Score = 34.2 bits (17), Expect = 0.18
 Identities = 20/21 (95%)
 Strand = Plus / Plus

                                    
Query: 243     acgccttcgacaccatcgccc 263
               ||||||||| |||||||||||
Sbjct: 3604291 acgccttcgccaccatcgccc 3604311




 Score = 34.2 bits (17), Expect = 0.18
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 520     ggagaagaacagcacct 536
               |||||||||||||||||
Sbjct: 5255117 ggagaagaacagcacct 5255101




 Score = 34.2 bits (17), Expect = 0.18
 Identities = 20/21 (95%)
 Strand = Plus / Minus

                                    
Query: 516     cgccggagaagaacagcacct 536
               ||||||||| |||||||||||
Sbjct: 5624109 cgccggagaggaacagcacct 5624089




 Score = 34.2 bits (17), Expect = 0.18
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 232     caaggcgctgtacgcct 248
               |||||||||||||||||
Sbjct: 6429110 caaggcgctgtacgcct 6429126




 Score = 32.2 bits (16), Expect = 0.69
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                              
Query: 226    ggaggtcaaggcgctg 241
              ||||||||||||||||
Sbjct: 459701 ggaggtcaaggcgctg 459716




 Score = 32.2 bits (16), Expect = 0.69
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                              
Query: 405    agccgctggagaacgg 420
              ||||||||||||||||
Sbjct: 915974 agccgctggagaacgg 915989




 Score = 32.2 bits (16), Expect = 0.69
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 516     cgccggagaagaacag 531
               ||||||||||||||||
Sbjct: 1160982 cgccggagaagaacag 1160997




 Score = 32.2 bits (16), Expect = 0.69
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 145     cggcttcgacctgcac 160
               ||||||||||||||||
Sbjct: 1852882 cggcttcgacctgcac 1852867




 Score = 32.2 bits (16), Expect = 0.69
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 170     ggctactggaacggcc 185
               ||||||||||||||||
Sbjct: 1874323 ggctactggaacggcc 1874338




 Score = 32.2 bits (16), Expect = 0.69
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 487     gggcgtgaccgaggcg 502
               ||||||||||||||||
Sbjct: 2030555 gggcgtgaccgaggcg 2030570




 Score = 32.2 bits (16), Expect = 0.69
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 365     tccgacggcaagctga 380
               ||||||||||||||||
Sbjct: 2136837 tccgacggcaagctga 2136852




 Score = 32.2 bits (16), Expect = 0.69
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 94      ctacgaccgcaccacc 109
               ||||||||||||||||
Sbjct: 2166083 ctacgaccgcaccacc 2166068




 Score = 32.2 bits (16), Expect = 0.69
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 227     gaggtcaaggcgctgt 242
               ||||||||||||||||
Sbjct: 2739349 gaggtcaaggcgctgt 2739334




 Score = 32.2 bits (16), Expect = 0.69
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 255     ccatcgccctggacgagcgc 274
               ||||||||||||||| ||||
Sbjct: 3120633 ccatcgccctggacgggcgc 3120652




 Score = 32.2 bits (16), Expect = 0.69
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 304     ctggatcgacggcacctcgc 323
               ||||||||||||| ||||||
Sbjct: 3550731 ctggatcgacggcgcctcgc 3550750




 Score = 32.2 bits (16), Expect = 0.69
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 196     gcgcgacagcgcgcgc 211
               ||||||||||||||||
Sbjct: 3662422 gcgcgacagcgcgcgc 3662407




 Score = 32.2 bits (16), Expect = 0.69
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 284     agcctgggcctgcgct 299
               ||||||||||||||||
Sbjct: 3676448 agcctgggcctgcgct 3676433




 Score = 32.2 bits (16), Expect = 0.69
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 130     gttctacccggccaac 145
               ||||||||||||||||
Sbjct: 3940387 gttctacccggccaac 3940402




 Score = 32.2 bits (16), Expect = 0.69
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 118     caacctgggcaagttc 133
               ||||||||||||||||
Sbjct: 4231418 caacctgggcaagttc 4231403




 Score = 32.2 bits (16), Expect = 0.69
 Identities = 22/24 (91%)
 Strand = Plus / Plus

                                       
Query: 263     ctggacgagcgctgggacctcagc 286
               |||| ||||||||||||| |||||
Sbjct: 4467887 ctggccgagcgctgggacgtcagc 4467910




 Score = 32.2 bits (16), Expect = 0.69
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 67      cggcggcttcgagctg 82
               ||||||||||||||||
Sbjct: 5396328 cggcggcttcgagctg 5396343




 Score = 32.2 bits (16), Expect = 0.69
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 256     catcgccctggacgag 271
               ||||||||||||||||
Sbjct: 5573576 catcgccctggacgag 5573561




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 145    cggcttcgacctgca 159
              |||||||||||||||
Sbjct: 115156 cggcttcgacctgca 115142




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 107    acctactcctacaac 121
              |||||||||||||||
Sbjct: 478676 acctactcctacaac 478690




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 188    accgacaagcgcgac 202
              |||||||||||||||
Sbjct: 497528 accgacaagcgcgac 497542




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                 
Query: 235    ggcgctgtacgccttcgac 253
              |||||||||||||| ||||
Sbjct: 504229 ggcgctgtacgcctacgac 504211




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 509    ggcctggcgccggag 523
              |||||||||||||||
Sbjct: 637901 ggcctggcgccggag 637887




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 21/23 (91%)
 Strand = Plus / Plus

                                     
Query: 451    caacccctcggcggaacacctgg 473
              |||||||||||||| | ||||||
Sbjct: 703970 caacccctcggcggcagacctgg 703992




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 509    ggcctggcgccggag 523
              |||||||||||||||
Sbjct: 712053 ggcctggcgccggag 712039




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                 
Query: 262    cctggacgagcgctgggac 280
              ||||| |||||||||||||
Sbjct: 860999 cctgggcgagcgctgggac 861017




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 227     gaggtcaaggcgctg 241
               |||||||||||||||
Sbjct: 1106776 gaggtcaaggcgctg 1106790




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 278     gacctcagcctgggc 292
               |||||||||||||||
Sbjct: 1219345 gacctcagcctgggc 1219359




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 256     catcgccctggacga 270
               |||||||||||||||
Sbjct: 1221728 catcgccctggacga 1221742




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 514     ggcgccggagaagaa 528
               |||||||||||||||
Sbjct: 1222694 ggcgccggagaagaa 1222680




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 68      ggcggcttcgagctg 82
               |||||||||||||||
Sbjct: 1228848 ggcggcttcgagctg 1228862




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 193     caagcgcgacagcgc 207
               |||||||||||||||
Sbjct: 1289037 caagcgcgacagcgc 1289023




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 163     cccgccgggctactg 177
               |||||||||||||||
Sbjct: 1398317 cccgccgggctactg 1398331




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 285     gcctgggcctgcgctacga 303
               ||||| |||||||||||||
Sbjct: 1581972 gcctgcgcctgcgctacga 1581954




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 259     cgccctggacgagcgctgg 277
               |||||| ||||||||||||
Sbjct: 1617165 cgccctcgacgagcgctgg 1617183




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 287     ctgggcctgcgctac 301
               |||||||||||||||
Sbjct: 1625032 ctgggcctgcgctac 1625018




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 195     agcgcgacagcgcgc 209
               |||||||||||||||
Sbjct: 1691574 agcgcgacagcgcgc 1691560




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 197     cgcgacagcgcgcgc 211
               |||||||||||||||
Sbjct: 1860214 cgcgacagcgcgcgc 1860200




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 257     atcgccctggacgagcgct 275
               ||||||||||||| |||||
Sbjct: 2052285 atcgccctggacgggcgct 2052267




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 59      acgctgatcggcggc 73
               |||||||||||||||
Sbjct: 2117265 acgctgatcggcggc 2117279




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 70      cggcttcgagctgtc 84
               |||||||||||||||
Sbjct: 2221170 cggcttcgagctgtc 2221156




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 73      cttcgagctgtcccgcgag 91
               ||||||||||| |||||||
Sbjct: 2448647 cttcgagctgtaccgcgag 2448665




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 60      cgctgatcggcggct 74
               |||||||||||||||
Sbjct: 2518715 cgctgatcggcggct 2518729




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 236     gcgctgtacgccttc 250
               |||||||||||||||
Sbjct: 2566669 gcgctgtacgccttc 2566683




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 349     ggtgcgcgccgacag 363
               |||||||||||||||
Sbjct: 2608200 ggtgcgcgccgacag 2608214




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 61      gctgatcggcggctt 75
               |||||||||||||||
Sbjct: 2911938 gctgatcggcggctt 2911924




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 78      agctgtcccgcgaga 92
               |||||||||||||||
Sbjct: 2929527 agctgtcccgcgaga 2929513




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 282     tcagcctgggcctgc 296
               |||||||||||||||
Sbjct: 3059967 tcagcctgggcctgc 3059981




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 256     catcgccctggacgagcgc 274
               ||||||||||| |||||||
Sbjct: 3169035 catcgccctggtcgagcgc 3169053




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 165     cgccgggctactgga 179
               |||||||||||||||
Sbjct: 3204417 cgccgggctactgga 3204403




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 291     gcctgcgctacgact 305
               |||||||||||||||
Sbjct: 3225100 gcctgcgctacgact 3225086




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 144     acggcttcgacctgc 158
               |||||||||||||||
Sbjct: 3235976 acggcttcgacctgc 3235990




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 135     acccggccaacggct 149
               |||||||||||||||
Sbjct: 3246524 acccggccaacggct 3246510




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 511     cctggcgccggagaa 525
               |||||||||||||||
Sbjct: 3355982 cctggcgccggagaa 3355996




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 66      tcggcggcttcgagc 80
               |||||||||||||||
Sbjct: 3399999 tcggcggcttcgagc 3400013




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 475     caccaccggctcggg 489
               |||||||||||||||
Sbjct: 3533054 caccaccggctcggg 3533068




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 344     ccgacggtgcgcgcc 358
               |||||||||||||||
Sbjct: 3557453 ccgacggtgcgcgcc 3557467




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 87      gcgagacctacgacc 101
               |||||||||||||||
Sbjct: 3908566 gcgagacctacgacc 3908552




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 66      tcggcggcttcgagc 80
               |||||||||||||||
Sbjct: 3916747 tcggcggcttcgagc 3916761




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 21/23 (91%)
 Strand = Plus / Minus

                                      
Query: 513     tggcgccggagaagaacagcacc 535
               ||||| ||| |||||||||||||
Sbjct: 4046331 tggcggcggtgaagaacagcacc 4046309




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 79      gctgtcccgcgagacctac 97
               |||||||||||| ||||||
Sbjct: 4153068 gctgtcccgcgacacctac 4153050




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 285     gcctgggcctgcgctacga 303
               |||||||||||| ||||||
Sbjct: 4319751 gcctgggcctgccctacga 4319769




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 59      acgctgatcggcggcttcg 77
               |||||||||||||| ||||
Sbjct: 4330824 acgctgatcggcggtttcg 4330806




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 227     gaggtcaaggcgctg 241
               |||||||||||||||
Sbjct: 4407956 gaggtcaaggcgctg 4407970




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 504     ccggaggcctggcgc 518
               |||||||||||||||
Sbjct: 4447299 ccggaggcctggcgc 4447285




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 290     ggcctgcgctacgac 304
               |||||||||||||||
Sbjct: 4481828 ggcctgcgctacgac 4481814




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 137     ccggccaacggcttc 151
               |||||||||||||||
Sbjct: 4738625 ccggccaacggcttc 4738611




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 278     gacctcagcctgggc 292
               |||||||||||||||
Sbjct: 4798993 gacctcagcctgggc 4798979




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 61      gctgatcggcggctt 75
               |||||||||||||||
Sbjct: 4815434 gctgatcggcggctt 4815420




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 237     cgctgtacgccttcg 251
               |||||||||||||||
Sbjct: 4919895 cgctgtacgccttcg 4919881




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 305     tggatcgacggcacc 319
               |||||||||||||||
Sbjct: 4975634 tggatcgacggcacc 4975620




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 504     ccggaggcctggcgc 518
               |||||||||||||||
Sbjct: 4994098 ccggaggcctggcgc 4994084




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 290     ggcctgcgctacgac 304
               |||||||||||||||
Sbjct: 5064479 ggcctgcgctacgac 5064465




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 94      ctacgaccgcaccacctac 112
               ||||||||||| |||||||
Sbjct: 5359354 ctacgaccgcaacacctac 5359372




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 509     ggcctggcgccggag 523
               |||||||||||||||
Sbjct: 5430182 ggcctggcgccggag 5430168




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 21/23 (91%)
 Strand = Plus / Minus

                                      
Query: 232     caaggcgctgtacgccttcgaca 254
               |||| ||||| ||||||||||||
Sbjct: 5519093 caagtcgctgcacgccttcgaca 5519071




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 278     gacctcagcctgggc 292
               |||||||||||||||
Sbjct: 5531662 gacctcagcctgggc 5531648




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 514     ggcgccggagaagaa 528
               |||||||||||||||
Sbjct: 5553254 ggcgccggagaagaa 5553240




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 406     gccgctggagaacgg 420
               |||||||||||||||
Sbjct: 5560023 gccgctggagaacgg 5560009




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 195     agcgcgacagcgcgc 209
               |||||||||||||||
Sbjct: 5663006 agcgcgacagcgcgc 5662992




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 145     cggcttcgacctgca 159
               |||||||||||||||
Sbjct: 5801919 cggcttcgacctgca 5801905




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 136     cccggccaacggctt 150
               |||||||||||||||
Sbjct: 5909864 cccggccaacggctt 5909850




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 86      cgcgagacctacgac 100
               |||||||||||||||
Sbjct: 5972421 cgcgagacctacgac 5972435




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 63      tgatcggcggcttcg 77
               |||||||||||||||
Sbjct: 6042513 tgatcggcggcttcg 6042527




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 395     ctggtattcaagccg 409
               |||||||||||||||
Sbjct: 6154381 ctggtattcaagccg 6154395




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 144     acggcttcgacctgc 158
               |||||||||||||||
Sbjct: 6238738 acggcttcgacctgc 6238724




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 139     ggccaacggcttcga 153
               |||||||||||||||
Sbjct: 6250995 ggccaacggcttcga 6250981




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 486     cgggcgtgaccgagg 500
               |||||||||||||||
Sbjct: 6411924 cgggcgtgaccgagg 6411938




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 258     tcgccctggacgagc 272
               |||||||||||||||
Sbjct: 6435535 tcgccctggacgagc 6435521




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 67      cggcggcttcgagct 81
               |||||||||||||||
Sbjct: 6463158 cggcggcttcgagct 6463144




 Score = 30.2 bits (15), Expect = 2.7
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 236     gcgctgtacgccttcgaca 254
               |||||| ||||||||||||
Sbjct: 6492227 gcgctgcacgccttcgaca 6492209




  Database: pa14
    Posted date:  Jan 15, 2004  3:01 PM
  Number of letters in database: 6,534,396
  Number of sequences in database:  1
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7107
Number of Sequences: 1
Number of extensions: 7107
Number of successful extensions: 107
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 107
length of query: 543
length of database: 6,534,396
effective HSP length: 16
effective length of query: 527
effective length of database: 6,534,380
effective search space: 3443618260
effective search space used: 3443618260
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)