BLASTN 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: pa14 
           1 sequences; 6,534,396 total letters



Query= (908 letters)

Distribution of 99 Blast Hits on the Query Sequence




                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GCTS_68                                                           676   0.0   
>GCTS_68 
          Length = 6534396

 Score =  676 bits (341), Expect = 0.0
 Identities = 344/345 (99%)
 Strand = Plus / Minus

                                                                           
Query: 62      taggtcaggttcgcgccgccctcctcctccggcagcagctccagcgacgacagcggttcg 121
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142484 taggtcaggttcgcgccgccctcctcctccggcagcagctccagcgacgacagcggttcg 1142425

                                                                           
Query: 122     ttcattgacggatcaccacggccgtcaggttgtcccgcgcggcgccgctcagggcgccgt 181
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142424 ttcattgacggatcaccacggccgtcaggttgtcccgcgcggcgccgctcagggcgccgt 1142365

                                                                           
Query: 182     cgaacagccgctccaccgccacctgcggcgatgccaggctcaacgcgcggcccagcgcat 241
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142364 cgaacagccgctccaccgccacctgcggcgatgccaggctcaacgcgcggcccagcgcat 1142305

                                                                           
Query: 242     cggcgctcagctcttcgtagagcccgtcgctgcagagcaggaagacatcaccgggatgca 301
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142304 cggcgctcagctcttcgtagagcccgtcgctgcagagcaggaagacatcaccgggatgca 1142245

                                                                           
Query: 302     cctccagttccaacacgtccagcaccagttgttcgctggcgccgacggcacgggtcagcg 361
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142244 cctccagttccaacacgtccagcaccagttgttcgctggcgccgacggcacgggtcagcg 1142185

                                                            
Query: 362     cgcgcgccgagggataggcgcgcgcctgctcgatacccatccgcc 406
               ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1142184 cgcgcgccgagggataggcgcgcgcctgctcgatatccatccgcc 1142140

 Score = 52.0 bits (26), Expect = 1e-06
 Identities = 69/82 (84%), Gaps = 1/82 (1%)
 Strand = Plus / Minus

                                                                           
Query: 428     acagtgagtggtcgtgggacaactggaacagccgctgtccgcgccccagtta-caactac 486
               |||| ||||||||| |||||| |||| |||||||||| ||||||| ||| || || |  |
Sbjct: 1142118 acagcgagtggtcgcgggacagctggtacagccgctggccgcgccacaggtagcagcggc 1142059

                                     
Query: 487     tgtcgccgacccatacacaggc 508
               ||||||||||||| || |||||
Sbjct: 1142058 tgtcgccgacccacacgcaggc 1142037

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 75     cgccgccctcctcctccggcagcagc 100
              ||||| ||||||||||||||||||||
Sbjct: 575117 cgccgtcctcctcctccggcagcagc 575142

 Score = 42.1 bits (21), Expect = 0.001
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 265     ccgtcgctgcagagcaggaag 285
               |||||||||||||||||||||
Sbjct: 5889234 ccgtcgctgcagagcaggaag 5889254

 Score = 38.2 bits (19), Expect = 0.019
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                          
Query: 90      ccggcagcagctccagcgacgacagcg 116
               |||||| |||||||||||||| |||||
Sbjct: 6511549 ccggcaccagctccagcgacgccagcg 6511575

 Score = 36.2 bits (18), Expect = 0.075
 Identities = 24/26 (92%)
 Strand = Plus / Plus

                                        
Query: 257    cgtagagcccgtcgctgcagagcagg 282
              ||||||||| ||||||||||| ||||
Sbjct: 952565 cgtagagccggtcgctgcagaccagg 952590

 Score = 36.2 bits (18), Expect = 0.075
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 315     cacgtccagcaccagttg 332
               ||||||||||||||||||
Sbjct: 1958273 cacgtccagcaccagttg 1958290

 Score = 36.2 bits (18), Expect = 0.075
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                     
Query: 101     tccagcgacgacagcggttcgt 122
               ||||||| ||||||||||||||
Sbjct: 3437506 tccagcgccgacagcggttcgt 3437485

 Score = 36.2 bits (18), Expect = 0.075
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 326     ccagttgttcgctggcgc 343
               ||||||||||||||||||
Sbjct: 5382072 ccagttgttcgctggcgc 5382055

 Score = 36.2 bits (18), Expect = 0.075
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                     
Query: 88      ctccggcagcagctccagcgac 109
               ||||||||||| ||||||||||
Sbjct: 5387705 ctccggcagcaactccagcgac 5387726

 Score = 36.2 bits (18), Expect = 0.075
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 176     cgccgtcgaacagccgct 193
               ||||||||||||||||||
Sbjct: 5701895 cgccgtcgaacagccgct 5701878

 Score = 36.2 bits (18), Expect = 0.075
 Identities = 24/26 (92%)
 Strand = Plus / Plus

                                         
Query: 257     cgtagagcccgtcgctgcagagcagg 282
               ||||||||| ||||||||||| ||||
Sbjct: 6089058 cgtagagccggtcgctgcagaccagg 6089083

 Score = 34.2 bits (17), Expect = 0.30
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                               
Query: 195    caccgccacctgcggcg 211
              |||||||||||||||||
Sbjct: 633014 caccgccacctgcggcg 633030

 Score = 34.2 bits (17), Expect = 0.30
 Identities = 20/21 (95%)
 Strand = Plus / Minus

                                    
Query: 535     tcggcgtgggtagtgatataa 555
               ||||| |||||||||||||||
Sbjct: 4640840 tcggcttgggtagtgatataa 4640820

 Score = 34.2 bits (17), Expect = 0.30
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 164     cgccgctcagggcgccg 180
               |||||||||||||||||
Sbjct: 4946527 cgccgctcagggcgccg 4946543

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                             
Query: 90    ccggcagcagctccag 105
             ||||||||||||||||
Sbjct: 15802 ccggcagcagctccag 15787

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                  
Query: 171    cagggcgccgtcgaacagcc 190
              |||||||| |||||||||||
Sbjct: 117381 cagggcgcggtcgaacagcc 117400

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                  
Query: 341    cgccgacggcacgggtcagc 360
              |||||| |||||||||||||
Sbjct: 144715 cgccgagggcacgggtcagc 144696

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                  
Query: 233    ccagcgcatcggcgctcagc 252
              ||||||| ||||||||||||
Sbjct: 696194 ccagcgcctcggcgctcagc 696213

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 380     cgcgcgcctgctcgat 395
               ||||||||||||||||
Sbjct: 1163562 cgcgcgcctgctcgat 1163547

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 331     tgttcgctggcgccga 346
               ||||||||||||||||
Sbjct: 1434176 tgttcgctggcgccga 1434161

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 317     cgtccagcaccagttg 332
               ||||||||||||||||
Sbjct: 1565111 cgtccagcaccagttg 1565096

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 22/24 (91%)
 Strand = Plus / Minus

                                       
Query: 77      ccgccctcctcctccggcagcagc 100
               ||||| || |||||||||||||||
Sbjct: 1927994 ccgccgtcttcctccggcagcagc 1927971

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 22/24 (91%)
 Strand = Plus / Plus

                                       
Query: 165     gccgctcagggcgccgtcgaacag 188
               |||| ||||| |||||||||||||
Sbjct: 2173262 gccgatcaggccgccgtcgaacag 2173285

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 159     cgcggcgccgctcagg 174
               ||||||||||||||||
Sbjct: 2676878 cgcggcgccgctcagg 2676893

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 249     cagctcttcgtagagc 264
               ||||||||||||||||
Sbjct: 2910552 cagctcttcgtagagc 2910567

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 265     ccgtcgctgcagagca 280
               ||||||||||||||||
Sbjct: 3144751 ccgtcgctgcagagca 3144736

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 233     ccagcgcatcggcgct 248
               ||||||||||||||||
Sbjct: 3806717 ccagcgcatcggcgct 3806732

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 160     gcggcgccgctcaggg 175
               ||||||||||||||||
Sbjct: 3987787 gcggcgccgctcaggg 3987802

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 22/24 (91%)
 Strand = Plus / Minus

                                       
Query: 264     cccgtcgctgcagagcaggaagac 287
               ||||||| || |||||||||||||
Sbjct: 4181829 cccgtcgttgaagagcaggaagac 4181806

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 347     cggcacgggtcagcgc 362
               ||||||||||||||||
Sbjct: 4251547 cggcacgggtcagcgc 4251562

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 192     ctccaccgccacctgc 207
               ||||||||||||||||
Sbjct: 4708922 ctccaccgccacctgc 4708937

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 96      gcagctccagcgacgacagc 115
               ||||| ||||||||||||||
Sbjct: 4903405 gcagcaccagcgacgacagc 4903424

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 74      gcgccgccctcctcct 89
               ||||||||||||||||
Sbjct: 5010774 gcgccgccctcctcct 5010789

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 378     ggcgcgcgcctgctcg 393
               ||||||||||||||||
Sbjct: 5114488 ggcgcgcgcctgctcg 5114473

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 317     cgtccagcaccagttg 332
               ||||||||||||||||
Sbjct: 5307229 cgtccagcaccagttg 5307214

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 159     cgcggcgccgctcagg 174
               ||||||||||||||||
Sbjct: 5925374 cgcggcgccgctcagg 5925359

 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 173     gggcgccgtcgaacag 188
               ||||||||||||||||
Sbjct: 6003623 gggcgccgtcgaacag 6003638

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                            
Query: 182   cgaacagccgctcca 196
             |||||||||||||||
Sbjct: 47737 cgaacagccgctcca 47723

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 256    tcgtagagcccgtcg 270
              |||||||||||||||
Sbjct: 121201 tcgtagagcccgtcg 121187

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 225    cgcgcggcccagcgc 239
              |||||||||||||||
Sbjct: 384726 cgcgcggcccagcgc 384740

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 86     tcctccggcagcagc 100
              |||||||||||||||
Sbjct: 386135 tcctccggcagcagc 386121

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 339    ggcgccgacggcacg 353
              |||||||||||||||
Sbjct: 432058 ggcgccgacggcacg 432072

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 90     ccggcagcagctcca 104
              |||||||||||||||
Sbjct: 506619 ccggcagcagctcca 506633

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 171    cagggcgccgtcgaa 185
              |||||||||||||||
Sbjct: 655928 cagggcgccgtcgaa 655942

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                 
Query: 363    gcgcgccgagggataggcg 381
              ||||||| |||||||||||
Sbjct: 687208 gcgcgcccagggataggcg 687226

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 379    gcgcgcgcctgctcg 393
              |||||||||||||||
Sbjct: 695746 gcgcgcgcctgctcg 695732

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 380    cgcgcgcctgctcga 394
              |||||||||||||||
Sbjct: 870258 cgcgcgcctgctcga 870244

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 155    cccgcgcggcgccgc 169
              |||||||||||||||
Sbjct: 885849 cccgcgcggcgccgc 885863

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 378    ggcgcgcgcctgctc 392
              |||||||||||||||
Sbjct: 899978 ggcgcgcgcctgctc 899992

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 406    cccatcatctgcagg 420
              |||||||||||||||
Sbjct: 988623 cccatcatctgcagg 988609

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 326     ccagttgttcgctgg 340
               |||||||||||||||
Sbjct: 1103398 ccagttgttcgctgg 1103384

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 237     cgcatcggcgctcag 251
               |||||||||||||||
Sbjct: 1129740 cgcatcggcgctcag 1129754

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 397     cccatccgccccatcatct 415
               |||||| ||||||||||||
Sbjct: 1198776 cccatctgccccatcatct 1198758

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 85      ctcctccggcagcag 99
               |||||||||||||||
Sbjct: 1237633 ctcctccggcagcag 1237619

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 150     gttgtcccgcgcggc 164
               |||||||||||||||
Sbjct: 1446894 gttgtcccgcgcggc 1446908

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 323     gcaccagttgttcgc 337
               |||||||||||||||
Sbjct: 1466999 gcaccagttgttcgc 1467013

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 315     cacgtccagcaccag 329
               |||||||||||||||
Sbjct: 1570075 cacgtccagcaccag 1570061

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 251     gctcttcgtagagcc 265
               |||||||||||||||
Sbjct: 1614536 gctcttcgtagagcc 1614522

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 202     acctgcggcgatgcc 216
               |||||||||||||||
Sbjct: 1619036 acctgcggcgatgcc 1619022

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 357     cagcgcgcgcgccga 371
               |||||||||||||||
Sbjct: 1860209 cagcgcgcgcgccga 1860195

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 233     ccagcgcatcggcgc 247
               |||||||||||||||
Sbjct: 1944264 ccagcgcatcggcgc 1944278

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 154     tcccgcgcggcgccg 168
               |||||||||||||||
Sbjct: 1996982 tcccgcgcggcgccg 1996968

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 231     gcccagcgcatcggc 245
               |||||||||||||||
Sbjct: 2249034 gcccagcgcatcggc 2249020

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 462     ctgtccgcgccccag 476
               |||||||||||||||
Sbjct: 2392373 ctgtccgcgccccag 2392387

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 360     cgcgcgcgccgaggg 374
               |||||||||||||||
Sbjct: 2578632 cgcgcgcgccgaggg 2578646

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 336     gctggcgccgacggc 350
               |||||||||||||||
Sbjct: 2663112 gctggcgccgacggc 2663098

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 226     gcgcggcccagcgca 240
               |||||||||||||||
Sbjct: 2771812 gcgcggcccagcgca 2771826

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 380     cgcgcgcctgctcga 394
               |||||||||||||||
Sbjct: 2809433 cgcgcgcctgctcga 2809447

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 74      gcgccgccctcctcc 88
               |||||||||||||||
Sbjct: 2842132 gcgccgccctcctcc 2842146

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 155     cccgcgcggcgccgc 169
               |||||||||||||||
Sbjct: 2892589 cccgcgcggcgccgc 2892603

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 206     gcggcgatgccaggc 220
               |||||||||||||||
Sbjct: 3043159 gcggcgatgccaggc 3043173

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 152     tgtcccgcgcggcgc 166
               |||||||||||||||
Sbjct: 3130311 tgtcccgcgcggcgc 3130325

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 379     gcgcgcgcctgctcg 393
               |||||||||||||||
Sbjct: 3381171 gcgcgcgcctgctcg 3381185

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 233     ccagcgcatcggcgc 247
               |||||||||||||||
Sbjct: 3384263 ccagcgcatcggcgc 3384249

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 249     cagctcttcgtagag 263
               |||||||||||||||
Sbjct: 3452042 cagctcttcgtagag 3452028

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 85      ctcctccggcagcag 99
               |||||||||||||||
Sbjct: 3525796 ctcctccggcagcag 3525810

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 318     gtccagcaccagttg 332
               |||||||||||||||
Sbjct: 3614957 gtccagcaccagttg 3614971

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 86      tcctccggcagcagc 100
               |||||||||||||||
Sbjct: 3740011 tcctccggcagcagc 3740025

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 96      gcagctccagcgacg 110
               |||||||||||||||
Sbjct: 3761508 gcagctccagcgacg 3761522

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 232     cccagcgcatcggcg 246
               |||||||||||||||
Sbjct: 3791978 cccagcgcatcggcg 3791992

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 74      gcgccgccctcctcc 88
               |||||||||||||||
Sbjct: 3887652 gcgccgccctcctcc 3887666

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 450     ctggaacagccgctg 464
               |||||||||||||||
Sbjct: 4264763 ctggaacagccgctg 4264777

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 380     cgcgcgcctgctcga 394
               |||||||||||||||
Sbjct: 4335516 cgcgcgcctgctcga 4335502

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 91      cggcagcagctccag 105
               |||||||||||||||
Sbjct: 4584889 cggcagcagctccag 4584903

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 188     gccgctccaccgcca 202
               |||||||||||||||
Sbjct: 4653293 gccgctccaccgcca 4653307

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 378     ggcgcgcgcctgctc 392
               |||||||||||||||
Sbjct: 4686526 ggcgcgcgcctgctc 4686540

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 159     cgcggcgccgctcagggcg 177
               ||||||||||| |||||||
Sbjct: 4727544 cgcggcgccgcgcagggcg 4727526

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 78      cgccctcctcctccg 92
               |||||||||||||||
Sbjct: 4871735 cgccctcctcctccg 4871749

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 229     cggcccagcgcatcg 243
               |||||||||||||||
Sbjct: 4947269 cggcccagcgcatcg 4947283

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 170     tcagggcgccgtcga 184
               |||||||||||||||
Sbjct: 5046388 tcagggcgccgtcga 5046402

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 89      tccggcagcagctcc 103
               |||||||||||||||
Sbjct: 5602020 tccggcagcagctcc 5602034

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 231     gcccagcgcatcggc 245
               |||||||||||||||
Sbjct: 5698375 gcccagcgcatcggc 5698389

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 69      ggttcgcgccgccct 83
               |||||||||||||||
Sbjct: 5755211 ggttcgcgccgccct 5755225

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 317     cgtccagcaccagtt 331
               |||||||||||||||
Sbjct: 5981349 cgtccagcaccagtt 5981363

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 332     gttcgctggcgccgacggc 350
               |||||||||||||| ||||
Sbjct: 5996230 gttcgctggcgccgccggc 5996248

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 335     cgctggcgccgacggcacg 353
               ||||||||||| |||||||
Sbjct: 6034483 cgctggcgccggcggcacg 6034465

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 193     tccaccgccacctgcggcg 211
               ||||||||||| |||||||
Sbjct: 6065762 tccaccgccacgtgcggcg 6065744

 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 452     ggaacagccgctgtc 466
               |||||||||||||||
Sbjct: 6285750 ggaacagccgctgtc 6285764
  Database: pa14
    Posted date:  Jan 15, 2004  3:01 PM
  Number of letters in database: 6,534,396
  Number of sequences in database:  1
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8101
Number of Sequences: 1
Number of extensions: 8101
Number of successful extensions: 99
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 99
length of query: 908
length of database: 6,534,396
effective HSP length: 16
effective length of query: 892
effective length of database: 6,534,380
effective search space: 5828666960
effective search space used: 5828666960
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)