BLASTN 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: pa14 
           1 sequences; 6,534,396 total letters



Query= 
         (914 letters)

Distribution of 29 Blast Hits on the Query Sequence 



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GCTS_68                                                           153   5e-37 



>GCTS_68 
          Length = 6534396

 Score =  153 bits (77), Expect = 5e-37
 Identities = 77/77 (100%)
 Strand = Plus / Plus

                                                                           
Query: 63      tacatcagccgcggtgtctacgtgatcaccgacgagcgccagcaacgcctggtcaaggtg 122
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6183368 tacatcagccgcggtgtctacgtgatcaccgacgagcgccagcaacgcctggtcaaggtg 6183427

                                
Query: 123     cgcctggaggacgatac 139
               |||||||||||||||||
Sbjct: 6183428 cgcctggaggacgatac 6183444






 Score = 38.2 bits (19), Expect = 0.019
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 101     ccagcaacgcctggtcaag 119
               |||||||||||||||||||
Sbjct: 5668056 ccagcaacgcctggtcaag 5668074






 Score = 34.2 bits (17), Expect = 0.30
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 101     ccagcaacgcctggtca 117
               |||||||||||||||||
Sbjct: 2445811 ccagcaacgcctggtca 2445827






 Score = 34.2 bits (17), Expect = 0.30
 Identities = 20/21 (95%)
 Strand = Plus / Plus

                                    
Query: 86      gatcaccgacgagcgccagca 106
               |||||||||||||||| ||||
Sbjct: 5337449 gatcaccgacgagcgcaagca 5337469






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 104     gcaacgcctggtcaag 119
               ||||||||||||||||
Sbjct: 1457276 gcaacgcctggtcaag 1457261






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 327     aggtggtgtggaagaa 342
               ||||||||||||||||
Sbjct: 1488357 aggtggtgtggaagaa 1488342






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 121     tgcgcctggaggacga 136
               ||||||||||||||||
Sbjct: 1501400 tgcgcctggaggacga 1501385






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 97      agcgccagcaacgcct 112
               ||||||||||||||||
Sbjct: 1851812 agcgccagcaacgcct 1851827






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 97      agcgccagcaacgcct 112
               ||||||||||||||||
Sbjct: 1993745 agcgccagcaacgcct 1993760






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 98      gcgccagcaacgcctg 113
               ||||||||||||||||
Sbjct: 2473028 gcgccagcaacgcctg 2473043






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 100     gccagcaacgcctggt 115
               ||||||||||||||||
Sbjct: 3054695 gccagcaacgcctggt 3054710






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 97      agcgccagcaacgcctggtc 116
               ||||||||||||||| ||||
Sbjct: 3807388 agcgccagcaacgccgggtc 3807407






 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 87     atcaccgacgagcgc 101
              |||||||||||||||
Sbjct: 274758 atcaccgacgagcgc 274772






 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 116    caaggtgcgcctgga 130
              |||||||||||||||
Sbjct: 498651 caaggtgcgcctgga 498665






 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 98     gcgccagcaacgcct 112
              |||||||||||||||
Sbjct: 576915 gcgccagcaacgcct 576901






 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 84     gtgatcaccgacgag 98
              |||||||||||||||
Sbjct: 821903 gtgatcaccgacgag 821889






 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 91      ccgacgagcgccagc 105
               |||||||||||||||
Sbjct: 1108531 ccgacgagcgccagc 1108517






 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 102     cagcaacgcctggtc 116
               |||||||||||||||
Sbjct: 1166806 cagcaacgcctggtc 1166792






 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 121     tgcgcctggaggacg 135
               |||||||||||||||
Sbjct: 1833840 tgcgcctggaggacg 1833854






 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 86      gatcaccgacgagcg 100
               |||||||||||||||
Sbjct: 2119183 gatcaccgacgagcg 2119197






 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 104     gcaacgcctggtcaa 118
               |||||||||||||||
Sbjct: 2451551 gcaacgcctggtcaa 2451565






 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 121     tgcgcctggaggacg 135
               |||||||||||||||
Sbjct: 2895154 tgcgcctggaggacg 2895168






 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 88      tcaccgacgagcgcc 102
               |||||||||||||||
Sbjct: 3809026 tcaccgacgagcgcc 3809012






 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 671     aggggggagggggaa 685
               |||||||||||||||
Sbjct: 3818746 aggggggagggggaa 3818732






 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 119     ggtgcgcctggagga 133
               |||||||||||||||
Sbjct: 5273559 ggtgcgcctggagga 5273545






 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 116     caaggtgcgcctgga 130
               |||||||||||||||
Sbjct: 5384243 caaggtgcgcctgga 5384229






 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 328     ggtggtgtggaagaa 342
               |||||||||||||||
Sbjct: 6042010 ggtggtgtggaagaa 6041996






 Score = 30.2 bits (15), Expect = 4.7
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 96      gagcgccagcaacgcctgg 114
               |||||||||||| ||||||
Sbjct: 6273949 gagcgccagcaaggcctgg 6273931






 Score = 30.2 bits (15), Expect = 4.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 97      agcgccagcaacgcc 111
               |||||||||||||||
Sbjct: 6393027 agcgccagcaacgcc 6393013






  Database: pa14
    Posted date:  Jan 15, 2004  3:01 PM
  Number of letters in database: 6,534,396
  Number of sequences in database:  1
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3126
Number of Sequences: 1
Number of extensions: 3126
Number of successful extensions: 29
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of query: 914
length of database: 6,534,396
effective HSP length: 16
effective length of query: 898
effective length of database: 6,534,380
effective search space: 5867873240
effective search space used: 5867873240
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)