BLAST Search Results

BLASTN 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: pa14 
           1 sequences; 6,534,396 total letters



Query= 
         (380 letters)

Distribution of 98 Blast Hits on the Query Sequence



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GCTS_68                                                           466   e-131 

>GCTS_68 
          Length = 6534396

 Score =  466 bits (235), Expect = e-131
 Identities = 244/247 (98%)
 Strand = Plus / Plus

                                                                         
Query: 134   ctgcgttgacaccctggttctgctggcggtagagctggaaaccgtggactttctgcaact 193
             ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52463 ctgcgctgacgccctggttctgctggcggtagagctggaaaccgtggactttctgcaact 52522

                                                                         
Query: 194   gctccagcatggcgtagctgttgtcggtggaaccgtcgtcgacgatgatcacttcgaaat 253
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52523 gctccagcatggcgtagctgttgtcggtggaaccgtcgtcgacgatgatcacttcgaaat 52582

                                                                         
Query: 254   tcgggtagtcctgctcgtagatgctgcgcagggcttcttccaggtacttttccgcgttga 313
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52583 tcgggtagtcctgctcgtagatgctgcgcagggcttcttccaggtacttttccgcgttga 52642

                                                                         
Query: 314   agcatggcgctacgacggataccagcggggcgtccgtcgtgcctgagtgcttgctggaag 373
             |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52643 agcagggcgctacgacggataccagcggggcgtccgtcgtgcctgagtgcttgctggaag 52702

                    
Query: 374   tggcttc 380
             |||||||
Sbjct: 52703 tggcttc 52709




 Score = 73.8 bits (37), Expect = 1e-13
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                           
Query: 37      gtatcgccgtggaacaactcgagggcgccctggaggtcttgcatgaacgccgtgtgtatc 96
               |||| ||||||||| ||||||| |||||||||  || |||||||||| || | ||| |||
Sbjct: 5521720 gtatagccgtggaagaactcgatggcgccctgcgggccttgcatgaaggcggcgtggatc 5521661

                                
Query: 97      ttctcgtcgacgaatac 113
               |||||||||||||||||
Sbjct: 5521660 ttctcgtcgacgaatac 5521644




 Score = 40.1 bits (20), Expect = 0.002
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 156    ctggcggtagagctggaaaccgtg 179
              |||||||||||||||||| |||||
Sbjct: 401556 ctggcggtagagctggaagccgtg 401533




 Score = 36.2 bits (18), Expect = 0.031
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 273     gatgctgcgcagggcttc 290
               ||||||||||||||||||
Sbjct: 5368430 gatgctgcgcagggcttc 5368447




 Score = 34.2 bits (17), Expect = 0.12
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 145     ccctggttctgctggcg 161
               |||||||||||||||||
Sbjct: 5757291 ccctggttctgctggcg 5757307




 Score = 32.2 bits (16), Expect = 0.48
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 231     gtcgacgatgatcacttcga 250
               ||||||||||||||| ||||
Sbjct: 3448104 gtcgacgatgatcacgtcga 3448123




 Score = 32.2 bits (16), Expect = 0.48
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 182     ctttctgcaactgctccagc 201
               |||||| |||||||||||||
Sbjct: 4185254 ctttcttcaactgctccagc 4185273




 Score = 32.2 bits (16), Expect = 0.48
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 188     gcaactgctccagcat 203
               ||||||||||||||||
Sbjct: 4225700 gcaactgctccagcat 4225715




 Score = 32.2 bits (16), Expect = 0.48
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 229     tcgtcgacgatgatca 244
               ||||||||||||||||
Sbjct: 5223536 tcgtcgacgatgatca 5223521




 Score = 32.2 bits (16), Expect = 0.48
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 285     ggcttcttccaggtac 300
               ||||||||||||||||
Sbjct: 5424197 ggcttcttccaggtac 5424212




 Score = 32.2 bits (16), Expect = 0.48
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 186     ctgcaactgctccagc 201
               ||||||||||||||||
Sbjct: 5752170 ctgcaactgctccagc 5752185




 Score = 30.2 bits (15), Expect = 1.9
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 188    gcaactgctccagca 202
              |||||||||||||||
Sbjct: 861933 gcaactgctccagca 861919




 Score = 30.2 bits (15), Expect = 1.9
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 227    cgtcgtcgacgatga 241
              |||||||||||||||
Sbjct: 874865 cgtcgtcgacgatga 874851




 Score = 30.2 bits (15), Expect = 1.9
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 37      gtatcgccgtggaac 51
               |||||||||||||||
Sbjct: 1311238 gtatcgccgtggaac 1311252




 Score = 30.2 bits (15), Expect = 1.9
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 145     ccctggttctgctgg 159
               |||||||||||||||
Sbjct: 1741614 ccctggttctgctgg 1741600




 Score = 30.2 bits (15), Expect = 1.9
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 188     gcaactgctccagca 202
               |||||||||||||||
Sbjct: 2910449 gcaactgctccagca 2910463




 Score = 30.2 bits (15), Expect = 1.9
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 158     ggcggtagagctgga 172
               |||||||||||||||
Sbjct: 2988161 ggcggtagagctgga 2988175




 Score = 30.2 bits (15), Expect = 1.9
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 229     tcgtcgacgatgatc 243
               |||||||||||||||
Sbjct: 3281549 tcgtcgacgatgatc 3281535




 Score = 30.2 bits (15), Expect = 1.9
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 276     gctgcgcagggcttc 290
               |||||||||||||||
Sbjct: 4021526 gctgcgcagggcttc 4021512




 Score = 30.2 bits (15), Expect = 1.9
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 145     ccctggttctgctggcggt 163
               ||||||| |||||||||||
Sbjct: 4157281 ccctggtgctgctggcggt 4157263




 Score = 30.2 bits (15), Expect = 1.9
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 55      tcgagggcgccctgg 69
               |||||||||||||||
Sbjct: 4163816 tcgagggcgccctgg 4163830




 Score = 30.2 bits (15), Expect = 1.9
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 226     ccgtcgtcgacgatg 240
               |||||||||||||||
Sbjct: 4430275 ccgtcgtcgacgatg 4430289




 Score = 30.2 bits (15), Expect = 1.9
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 229     tcgtcgacgatgatc 243
               |||||||||||||||
Sbjct: 4866163 tcgtcgacgatgatc 4866177




 Score = 30.2 bits (15), Expect = 1.9
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 145     ccctggttctgctgg 159
               |||||||||||||||
Sbjct: 5153275 ccctggttctgctgg 5153289




 Score = 30.2 bits (15), Expect = 1.9
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 56      cgagggcgccctgga 70
               |||||||||||||||
Sbjct: 5375858 cgagggcgccctgga 5375872




 Score = 30.2 bits (15), Expect = 1.9
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 236     cgatgatcacttcga 250
               |||||||||||||||
Sbjct: 5643189 cgatgatcacttcga 5643203




 Score = 30.2 bits (15), Expect = 1.9
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 227     cgtcgtcgacgatgatcac 245
               |||||||||||| ||||||
Sbjct: 5741344 cgtcgtcgacgaagatcac 5741362




 Score = 30.2 bits (15), Expect = 1.9
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 154     tgctggcggtagagc 168
               |||||||||||||||
Sbjct: 6383823 tgctggcggtagagc 6383837




 Score = 30.2 bits (15), Expect = 1.9
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 56      cgagggcgccctgga 70
               |||||||||||||||
Sbjct: 6433126 cgagggcgccctgga 6433140




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 285    ggcttcttccaggt 298
              ||||||||||||||
Sbjct: 472564 ggcttcttccaggt 472577




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 272    agatgctgcgcagg 285
              ||||||||||||||
Sbjct: 625829 agatgctgcgcagg 625842




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 17/18 (94%)
 Strand = Plus / Plus

                                
Query: 185    tctgcaactgctccagca 202
              |||||| |||||||||||
Sbjct: 657983 tctgcacctgctccagca 658000




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 158    ggcggtagagctgg 171
              ||||||||||||||
Sbjct: 662539 ggcggtagagctgg 662526




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 94     atcttctcgtcgac 107
              ||||||||||||||
Sbjct: 703107 atcttctcgtcgac 703094




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 56     cgagggcgccctgg 69
              ||||||||||||||
Sbjct: 714967 cgagggcgccctgg 714980




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 171     gaaaccgtggactt 184
               ||||||||||||||
Sbjct: 1051088 gaaaccgtggactt 1051075




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 261     gtcctgctcgtaga 274
               ||||||||||||||
Sbjct: 1222571 gtcctgctcgtaga 1222558




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 159     gcggtagagctgga 172
               ||||||||||||||
Sbjct: 1245637 gcggtagagctgga 1245650




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 165     gagctggaaaccgt 178
               ||||||||||||||
Sbjct: 1290213 gagctggaaaccgt 1290226




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 336     cagcggggcgtccg 349
               ||||||||||||||
Sbjct: 1400256 cagcggggcgtccg 1400269




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 293     ccaggtacttttcc 306
               ||||||||||||||
Sbjct: 1535067 ccaggtacttttcc 1535054




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 184     ttctgcaactgctc 197
               ||||||||||||||
Sbjct: 1637562 ttctgcaactgctc 1637549




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 61      gcgccctggaggtc 74
               ||||||||||||||
Sbjct: 1846096 gcgccctggaggtc 1846083




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 152     tctgctggcggtag 165
               ||||||||||||||
Sbjct: 1846538 tctgctggcggtag 1846551




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 155     gctggcggtagagc 168
               ||||||||||||||
Sbjct: 1847117 gctggcggtagagc 1847130




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 59      gggcgccctggagg 72
               ||||||||||||||
Sbjct: 2054839 gggcgccctggagg 2054852




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 319     ggcgctacgacgga 332
               ||||||||||||||
Sbjct: 2218646 ggcgctacgacgga 2218659




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 98      tctcgtcgacgaat 111
               ||||||||||||||
Sbjct: 2278548 tctcgtcgacgaat 2278561




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 189     caactgctccagca 202
               ||||||||||||||
Sbjct: 2454581 caactgctccagca 2454568




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                 
Query: 284     gggcttcttccaggtact 301
               |||| |||||||||||||
Sbjct: 2537446 gggcctcttccaggtact 2537429




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 288     ttcttccaggtact 301
               ||||||||||||||
Sbjct: 2559729 ttcttccaggtact 2559716




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 20/22 (90%)
 Strand = Plus / Plus

                                     
Query: 264     ctgctcgtagatgctgcgcagg 285
               |||||||||||||  |||||||
Sbjct: 2621709 ctgctcgtagatgtcgcgcagg 2621730




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 188     gcaactgctccagc 201
               ||||||||||||||
Sbjct: 2715364 gcaactgctccagc 2715377




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 149     ggttctgctggcgg 162
               ||||||||||||||
Sbjct: 2719275 ggttctgctggcgg 2719262




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 289     tcttccaggtactt 302
               ||||||||||||||
Sbjct: 2751847 tcttccaggtactt 2751860




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 274     atgctgcgcagggc 287
               ||||||||||||||
Sbjct: 2793477 atgctgcgcagggc 2793490




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 156     ctggcggtagagct 169
               ||||||||||||||
Sbjct: 2862450 ctggcggtagagct 2862463




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 277     ctgcgcagggcttc 290
               ||||||||||||||
Sbjct: 2894075 ctgcgcagggcttc 2894062




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 38      tatcgccgtggaac 51
               ||||||||||||||
Sbjct: 2910198 tatcgccgtggaac 2910211




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 165     gagctggaaaccgt 178
               ||||||||||||||
Sbjct: 2928535 gagctggaaaccgt 2928522




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 96      cttctcgtcgacga 109
               ||||||||||||||
Sbjct: 2966428 cttctcgtcgacga 2966441




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 152     tctgctggcggtag 165
               ||||||||||||||
Sbjct: 3044046 tctgctggcggtag 3044033




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 94      atcttctcgtcgac 107
               ||||||||||||||
Sbjct: 3136654 atcttctcgtcgac 3136667




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 203     tggcgtagctgttg 216
               ||||||||||||||
Sbjct: 3368090 tggcgtagctgttg 3368077




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 289     tcttccaggtactt 302
               ||||||||||||||
Sbjct: 3447604 tcttccaggtactt 3447617




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 227     cgtcgtcgacgatg 240
               ||||||||||||||
Sbjct: 3654047 cgtcgtcgacgatg 3654060




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 329     cggataccagcggg 342
               ||||||||||||||
Sbjct: 3656106 cggataccagcggg 3656119




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 284     gggcttcttccagg 297
               ||||||||||||||
Sbjct: 3738377 gggcttcttccagg 3738390




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 299     acttttccgcgttg 312
               ||||||||||||||
Sbjct: 3969737 acttttccgcgttg 3969750




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                 
Query: 235     acgatgatcacttcgaaa 252
               ||||||||||| ||||||
Sbjct: 4098143 acgatgatcacgtcgaaa 4098126




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 165     gagctggaaaccgt 178
               ||||||||||||||
Sbjct: 4186984 gagctggaaaccgt 4186971




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 273     gatgctgcgcaggg 286
               ||||||||||||||
Sbjct: 4304881 gatgctgcgcaggg 4304894




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 17/18 (94%)
 Strand = Plus / Plus

                                 
Query: 55      tcgagggcgccctggagg 72
               |||||| |||||||||||
Sbjct: 4333133 tcgaggccgccctggagg 4333150




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 57      gagggcgccctgga 70
               ||||||||||||||
Sbjct: 4381551 gagggcgccctgga 4381564




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 284     gggcttcttccagg 297
               ||||||||||||||
Sbjct: 4522967 gggcttcttccagg 4522980




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 100     tcgtcgacgaatac 113
               ||||||||||||||
Sbjct: 4630689 tcgtcgacgaatac 4630702




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 194     gctccagcatggcg 207
               ||||||||||||||
Sbjct: 4647094 gctccagcatggcg 4647107




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 143     caccctggttctgc 156
               ||||||||||||||
Sbjct: 4788032 caccctggttctgc 4788045




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 128     tcctgcctgcgttg 141
               ||||||||||||||
Sbjct: 4874913 tcctgcctgcgttg 4874900




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 183     tttctgcaactgct 196
               ||||||||||||||
Sbjct: 4992618 tttctgcaactgct 4992605




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 58      agggcgccctggag 71
               ||||||||||||||
Sbjct: 5138959 agggcgccctggag 5138946




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 342     ggcgtccgtcgtgc 355
               ||||||||||||||
Sbjct: 5200416 ggcgtccgtcgtgc 5200429




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                 
Query: 54      ctcgagggcgccctggag 71
               |||||| |||||||||||
Sbjct: 5300966 ctcgagcgcgccctggag 5300949




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 336     cagcggggcgtccg 349
               ||||||||||||||
Sbjct: 5351035 cagcggggcgtccg 5351022




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 153     ctgctggcggtaga 166
               ||||||||||||||
Sbjct: 5432091 ctgctggcggtaga 5432104




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 161     ggtagagctggaaa 174
               ||||||||||||||
Sbjct: 5458525 ggtagagctggaaa 5458538




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 155     gctggcggtagagc 168
               ||||||||||||||
Sbjct: 5637763 gctggcggtagagc 5637750




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 188     gcaactgctccagc 201
               ||||||||||||||
Sbjct: 5910121 gcaactgctccagc 5910108




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 230     cgtcgacgatgatc 243
               ||||||||||||||
Sbjct: 5959627 cgtcgacgatgatc 5959614




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                 
Query: 153     ctgctggcggtagagctg 170
               ||||||||||| ||||||
Sbjct: 6011622 ctgctggcggtcgagctg 6011605




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                 
Query: 184     ttctgcaactgctccagc 201
               |||| |||||||||||||
Sbjct: 6020201 ttctccaactgctccagc 6020184




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 268     tcgtagatgctgcg 281
               ||||||||||||||
Sbjct: 6066185 tcgtagatgctgcg 6066172




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 41      cgccgtggaacaac 54
               ||||||||||||||
Sbjct: 6141504 cgccgtggaacaac 6141517




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 56      cgagggcgccctgg 69
               ||||||||||||||
Sbjct: 6154761 cgagggcgccctgg 6154774




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 186     ctgcaactgctcca 199
               ||||||||||||||
Sbjct: 6234495 ctgcaactgctcca 6234482




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 281     gcagggcttcttcc 294
               ||||||||||||||
Sbjct: 6360276 gcagggcttcttcc 6360289




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 158     ggcggtagagctgg 171
               ||||||||||||||
Sbjct: 6362173 ggcggtagagctgg 6362186




 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 152     tctgctggcggtag 165
               ||||||||||||||
Sbjct: 6386019 tctgctggcggtag 6386032




  Database: pa14
    Posted date:  Jan 15, 2004  3:01 PM
  Number of letters in database: 6,534,396
  Number of sequences in database:  1
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2948
Number of Sequences: 1
Number of extensions: 2948
Number of successful extensions: 98
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 98
length of query: 380
length of database: 6,534,396
effective HSP length: 16
effective length of query: 364
effective length of database: 6,534,380
effective search space: 2378514320
effective search space used: 2378514320
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)