BLAST Search Results

BLASTN 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: pa14 
           1 sequences; 6,534,396 total letters



Query= 
         (346 letters)

Distribution of 102 Blast Hits on the Query Sequence



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GCTS_68                                                           561   e-160 

>GCTS_68 
          Length = 6534396

 Score =  561 bits (283), Expect = e-160
 Identities = 290/291 (99%), Gaps = 1/291 (0%)
 Strand = Plus / Plus

                                                                          
Query: 54     tagtcggtgtgcggcgaatattaccggatgtgccggngaaagaaagccgttcggtgtcaa 113
              |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 519098 tagtcggtgtgcggcgaatattaccggatgtgccgg-gaaagaaagccgttcggtgtcaa 519156

                                                                          
Query: 114    accaatgacgcaattgccggagatggaagctctttgcgtcttgtcctgtctggttttctg 173
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519157 accaatgacgcaattgccggagatggaagctctttgcgtcttgtcctgtctggttttctg 519216

                                                                          
Query: 174    gctgagcatgtaggacgttactgacctttatcagggggcggcatgatccgggaaatcctc 233
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519217 gctgagcatgtaggacgttactgacctttatcagggggcggcatgatccgggaaatcctc 519276

                                                                          
Query: 234    aagatgggtgacgagcgcctgttgcgcattgcgcagccggtgccgtccgaactgctcggc 293
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519277 aagatgggtgacgagcgcctgttgcgcattgcgcagccggtgccgtccgaactgctcggc 519336

                                                                 
Query: 294    agcgaggagctgcaacggctgatcgacgacatgttcgaaaccatgcatcac 344
              |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519337 agcgaggagctgcaacggctgatcgacgacatgttcgaaaccatgcatcac 519387




 Score = 56.0 bits (28), Expect = 3e-08
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                           
Query: 311     gctgatcgacgacatgttcgaaaccatg 338
               ||||||||||||||||||||||||||||
Sbjct: 5822842 gctgatcgacgacatgttcgaaaccatg 5822815




 Score = 36.2 bits (18), Expect = 0.028
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 281     cgaactgctcggcagcga 298
               ||||||||||||||||||
Sbjct: 2623488 cgaactgctcggcagcga 2623505




 Score = 36.2 bits (18), Expect = 0.028
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 293     cagcgaggagctgcaacg 310
               ||||||||||||||||||
Sbjct: 5462145 cagcgaggagctgcaacg 5462128




 Score = 32.2 bits (16), Expect = 0.43
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                 
Query: 281   cgaactgctcggcagcgagg 300
             ||||||||||||| ||||||
Sbjct: 10573 cgaactgctcggcggcgagg 10592




 Score = 32.2 bits (16), Expect = 0.43
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                              
Query: 128    tgccggagatggaagc 143
              ||||||||||||||||
Sbjct: 969547 tgccggagatggaagc 969532




 Score = 32.2 bits (16), Expect = 0.43
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 290     cggcagcgaggagctg 305
               ||||||||||||||||
Sbjct: 2407332 cggcagcgaggagctg 2407317




 Score = 32.2 bits (16), Expect = 0.43
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 222     cgggaaatcctcaaga 237
               ||||||||||||||||
Sbjct: 2804998 cgggaaatcctcaaga 2804983




 Score = 32.2 bits (16), Expect = 0.43
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 285     ctgctcggcagcgagg 300
               ||||||||||||||||
Sbjct: 3745451 ctgctcggcagcgagg 3745436




 Score = 32.2 bits (16), Expect = 0.43
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 290     cggcagcgaggagctg 305
               ||||||||||||||||
Sbjct: 4125443 cggcagcgaggagctg 4125458




 Score = 32.2 bits (16), Expect = 0.43
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 279     tccgaactgctcggcagcga 298
               ||||||||||||| ||||||
Sbjct: 4329276 tccgaactgctcgccagcga 4329295




 Score = 32.2 bits (16), Expect = 0.43
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 244     acgagcgcctgttgcg 259
               ||||||||||||||||
Sbjct: 4425547 acgagcgcctgttgcg 4425532




 Score = 32.2 bits (16), Expect = 0.43
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 208     ggggcggcatgatccg 223
               ||||||||||||||||
Sbjct: 5073668 ggggcggcatgatccg 5073653




 Score = 32.2 bits (16), Expect = 0.43
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 285     ctgctcggcagcgagg 300
               ||||||||||||||||
Sbjct: 5108189 ctgctcggcagcgagg 5108174




 Score = 32.2 bits (16), Expect = 0.43
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 285     ctgctcggcagcgagg 300
               ||||||||||||||||
Sbjct: 5128042 ctgctcggcagcgagg 5128027




 Score = 32.2 bits (16), Expect = 0.43
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 243     gacgagcgcctgttgc 258
               ||||||||||||||||
Sbjct: 5552085 gacgagcgcctgttgc 5552100




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                            
Query: 286   tgctcggcagcgagg 300
             |||||||||||||||
Sbjct: 24367 tgctcggcagcgagg 24381




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                            
Query: 245   cgagcgcctgttgcg 259
             |||||||||||||||
Sbjct: 55144 cgagcgcctgttgcg 55130




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                 
Query: 293    cagcgaggagctgcaacgg 311
              |||| ||||||||||||||
Sbjct: 769843 cagcaaggagctgcaacgg 769825




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 248    gcgcctgttgcgcat 262
              |||||||||||||||
Sbjct: 857143 gcgcctgttgcgcat 857157




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 284     actgctcggcagcga 298
               |||||||||||||||
Sbjct: 1732844 actgctcggcagcga 1732858




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 312     ctgatcgacgacatg 326
               |||||||||||||||
Sbjct: 2486233 ctgatcgacgacatg 2486219




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 169     ttctggctgagcatg 183
               |||||||||||||||
Sbjct: 2525474 ttctggctgagcatg 2525488




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 295     gcgaggagctgcaacggct 313
               ||||||| |||||||||||
Sbjct: 3121845 gcgaggatctgcaacggct 3121863




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 281     cgaactgctcggcagcgag 299
               ||||||| |||||||||||
Sbjct: 3173431 cgaactgttcggcagcgag 3173413




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 274     tgccgtccgaactgctcgg 292
               ||||| |||||||||||||
Sbjct: 3790419 tgccggccgaactgctcgg 3790401




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 264     gcgcagccggtgccg 278
               |||||||||||||||
Sbjct: 3960093 gcgcagccggtgccg 3960079




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 21/23 (91%)
 Strand = Plus / Minus

                                      
Query: 285     ctgctcggcagcgaggagctgca 307
               ||||||||||||| || ||||||
Sbjct: 4296903 ctgctcggcagcgtggcgctgca 4296881




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 280     ccgaactgctcggca 294
               |||||||||||||||
Sbjct: 4739913 ccgaactgctcggca 4739927




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 280     ccgaactgctcggca 294
               |||||||||||||||
Sbjct: 4890533 ccgaactgctcggca 4890547




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 280     ccgaactgctcggcagcga 298
               |||||||||||||| ||||
Sbjct: 5097838 ccgaactgctcggcggcga 5097856




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 289     tcggcagcgaggagc 303
               |||||||||||||||
Sbjct: 5181091 tcggcagcgaggagc 5181105




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 280     ccgaactgctcggca 294
               |||||||||||||||
Sbjct: 5898072 ccgaactgctcggca 5898058




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 287     gctcggcagcgagga 301
               |||||||||||||||
Sbjct: 6233962 gctcggcagcgagga 6233948




 Score = 30.2 bits (15), Expect = 1.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 287     gctcggcagcgagga 301
               |||||||||||||||
Sbjct: 6330449 gctcggcagcgagga 6330435




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 17/18 (94%)
 Strand = Plus / Plus

                               
Query: 279   tccgaactgctcggcagc 296
             ||||||||||||| ||||
Sbjct: 17389 tccgaactgctcgacagc 17406




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                           
Query: 281   cgaactgctcggca 294
             ||||||||||||||
Sbjct: 54220 cgaactgctcggca 54207




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                           
Query: 316   tcgacgacatgttc 329
             ||||||||||||||
Sbjct: 79863 tcgacgacatgttc 79876




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 294    agcgaggagctgca 307
              ||||||||||||||
Sbjct: 387708 agcgaggagctgca 387721




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 309    cggctgatcgacga 322
              ||||||||||||||
Sbjct: 459633 cggctgatcgacga 459646




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 269    gccggtgccgtccg 282
              ||||||||||||||
Sbjct: 471261 gccggtgccgtccg 471274




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 297    gaggagctgcaacg 310
              ||||||||||||||
Sbjct: 586805 gaggagctgcaacg 586818




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 309    cggctgatcgacga 322
              ||||||||||||||
Sbjct: 638948 cggctgatcgacga 638935




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 280    ccgaactgctcggc 293
              ||||||||||||||
Sbjct: 689311 ccgaactgctcggc 689298




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 56     gtcggtgtgcggcg 69
              ||||||||||||||
Sbjct: 707782 gtcggtgtgcggcg 707769




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 20/22 (90%)
 Strand = Plus / Minus

                                    
Query: 249    cgcctgttgcgcattgcgcagc 270
              |||||| || ||||||||||||
Sbjct: 861575 cgcctggtgggcattgcgcagc 861554




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 287    gctcggcagcgagg 300
              ||||||||||||||
Sbjct: 981695 gctcggcagcgagg 981682




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 208     ggggcggcatgatc 221
               ||||||||||||||
Sbjct: 1002287 ggggcggcatgatc 1002274




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 208     ggggcggcatgatc 221
               ||||||||||||||
Sbjct: 1005811 ggggcggcatgatc 1005798




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 281     cgaactgctcggca 294
               ||||||||||||||
Sbjct: 1135919 cgaactgctcggca 1135932




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 309     cggctgatcgacga 322
               ||||||||||||||
Sbjct: 1180106 cggctgatcgacga 1180119




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 270     ccggtgccgtccga 283
               ||||||||||||||
Sbjct: 1233064 ccggtgccgtccga 1233077




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 265     cgcagccggtgccg 278
               ||||||||||||||
Sbjct: 1242345 cgcagccggtgccg 1242358




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 311     gctgatcgacgaca 324
               ||||||||||||||
Sbjct: 1252853 gctgatcgacgaca 1252840




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 208     ggggcggcatgatc 221
               ||||||||||||||
Sbjct: 1334951 ggggcggcatgatc 1334938




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 223     gggaaatcctcaag 236
               ||||||||||||||
Sbjct: 1493510 gggaaatcctcaag 1493523




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 309     cggctgatcgacga 322
               ||||||||||||||
Sbjct: 1535079 cggctgatcgacga 1535092




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 288     ctcggcagcgagga 301
               ||||||||||||||
Sbjct: 1604225 ctcggcagcgagga 1604212




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 289     tcggcagcgaggag 302
               ||||||||||||||
Sbjct: 1677464 tcggcagcgaggag 1677477




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 127     ttgccggagatgga 140
               ||||||||||||||
Sbjct: 1794835 ttgccggagatgga 1794822




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 269     gccggtgccgtccg 282
               ||||||||||||||
Sbjct: 1850717 gccggtgccgtccg 1850704




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 280     ccgaactgctcggc 293
               ||||||||||||||
Sbjct: 1866488 ccgaactgctcggc 1866501




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 290     cggcagcgaggagc 303
               ||||||||||||||
Sbjct: 1882111 cggcagcgaggagc 1882124




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 284     actgctcggcagcg 297
               ||||||||||||||
Sbjct: 1999743 actgctcggcagcg 1999756




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 280     ccgaactgctcggc 293
               ||||||||||||||
Sbjct: 2065094 ccgaactgctcggc 2065081




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 290     cggcagcgaggagc 303
               ||||||||||||||
Sbjct: 2209187 cggcagcgaggagc 2209174




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 281     cgaactgctcggca 294
               ||||||||||||||
Sbjct: 2458373 cgaactgctcggca 2458386




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 274     tgccgtccgaactg 287
               ||||||||||||||
Sbjct: 2575604 tgccgtccgaactg 2575617




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 213     ggcatgatccggga 226
               ||||||||||||||
Sbjct: 3025200 ggcatgatccggga 3025213




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 266     gcagccggtgccgt 279
               ||||||||||||||
Sbjct: 3407133 gcagccggtgccgt 3407146




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 266     gcagccggtgccgt 279
               ||||||||||||||
Sbjct: 3410429 gcagccggtgccgt 3410416




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 243     gacgagcgcctgtt 256
               ||||||||||||||
Sbjct: 3450858 gacgagcgcctgtt 3450871




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 309     cggctgatcgacga 322
               ||||||||||||||
Sbjct: 3527099 cggctgatcgacga 3527086




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 206     agggggcggcatga 219
               ||||||||||||||
Sbjct: 3546157 agggggcggcatga 3546144




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 245     cgagcgcctgttgc 258
               ||||||||||||||
Sbjct: 3592188 cgagcgcctgttgc 3592175




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 245     cgagcgcctgttgc 258
               ||||||||||||||
Sbjct: 3611309 cgagcgcctgttgc 3611296




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                 
Query: 300     gagctgcaacggctgatc 317
               |||||| |||||||||||
Sbjct: 3689899 gagctggaacggctgatc 3689882




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 265     cgcagccggtgccg 278
               ||||||||||||||
Sbjct: 3720321 cgcagccggtgccg 3720308




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 245     cgagcgcctgttgc 258
               ||||||||||||||
Sbjct: 3887983 cgagcgcctgttgc 3887970




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 298     aggagctgcaacgg 311
               ||||||||||||||
Sbjct: 3984513 aggagctgcaacgg 3984526




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 284     actgctcggcagcg 297
               ||||||||||||||
Sbjct: 4024717 actgctcggcagcg 4024704




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 316     tcgacgacatgttc 329
               ||||||||||||||
Sbjct: 4041677 tcgacgacatgttc 4041690




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 208     ggggcggcatgatc 221
               ||||||||||||||
Sbjct: 4049746 ggggcggcatgatc 4049759




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 220     tccgggaaatcctc 233
               ||||||||||||||
Sbjct: 4052447 tccgggaaatcctc 4052460




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 212     cggcatgatccggg 225
               ||||||||||||||
Sbjct: 4213899 cggcatgatccggg 4213912




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 309     cggctgatcgacga 322
               ||||||||||||||
Sbjct: 4270199 cggctgatcgacga 4270186




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 283     aactgctcggcagc 296
               ||||||||||||||
Sbjct: 4309080 aactgctcggcagc 4309067




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 209     gggcggcatgatcc 222
               ||||||||||||||
Sbjct: 4443920 gggcggcatgatcc 4443933




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 280     ccgaactgctcggc 293
               ||||||||||||||
Sbjct: 4696718 ccgaactgctcggc 4696705




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 280     ccgaactgctcggc 293
               ||||||||||||||
Sbjct: 4769803 ccgaactgctcggc 4769816




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 280     ccgaactgctcggc 293
               ||||||||||||||
Sbjct: 4966466 ccgaactgctcggc 4966453




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 281     cgaactgctcggca 294
               ||||||||||||||
Sbjct: 5095605 cgaactgctcggca 5095618




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 306     caacggctgatcga 319
               ||||||||||||||
Sbjct: 5218547 caacggctgatcga 5218534




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 280     ccgaactgctcggc 293
               ||||||||||||||
Sbjct: 5419326 ccgaactgctcggc 5419313




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 208     ggggcggcatgatc 221
               ||||||||||||||
Sbjct: 5515761 ggggcggcatgatc 5515774




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 309     cggctgatcgacga 322
               ||||||||||||||
Sbjct: 5969094 cggctgatcgacga 5969107




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                 
Query: 280     ccgaactgctcggcagcg 297
               |||| |||||||||||||
Sbjct: 6124287 ccgacctgctcggcagcg 6124270




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 305     gcaacggctgatcg 318
               ||||||||||||||
Sbjct: 6202605 gcaacggctgatcg 6202592




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 249     cgcctgttgcgcat 262
               ||||||||||||||
Sbjct: 6219763 cgcctgttgcgcat 6219750




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 224     ggaaatcctcaaga 237
               ||||||||||||||
Sbjct: 6254195 ggaaatcctcaaga 6254208




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 286     tgctcggcagcgag 299
               ||||||||||||||
Sbjct: 6340256 tgctcggcagcgag 6340269




 Score = 28.2 bits (14), Expect = 6.8
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 281     cgaactgctcggca 294
               ||||||||||||||
Sbjct: 6522469 cgaactgctcggca 6522482




  Database: pa14
    Posted date:  Jan 15, 2004  3:01 PM
  Number of letters in database: 6,534,396
  Number of sequences in database:  1
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2159
Number of Sequences: 1
Number of extensions: 2159
Number of successful extensions: 103
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 102
length of query: 346
length of database: 6,534,396
effective HSP length: 16
effective length of query: 330
effective length of database: 6,534,380
effective search space: 2156345400
effective search space used: 2156345400
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)