BLASTN 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: pa14 
           1 sequences; 6,534,396 total letters



Query= (286 letters)

Distribution of 111 Blast Hits on the Query Sequence




                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GCTS_68                                                           260   8e-70 
>GCTS_68 
          Length = 6534396

 Score =  260 bits (131), Expect = 8e-70
 Identities = 131/131 (100%)
 Strand = Plus / Plus

                                                                          
Query: 27     tacgtcgatgaagcggcgggtgtcgccggagctgtccttgaagcagacgatgttctcgca 86
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682069 tacgtcgatgaagcggcgggtgtcgccggagctgtccttgaagcagacgatgttctcgca 682128

                                                                          
Query: 87     gtcggccagggaaaccaggatgtccggggtgacatcgttccggtagatcggcgggttgtt 146
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682129 gtcggccagggaaaccaggatgtccggggtgacatcgttccggtagatcggcgggttgtt 682188

                         
Query: 147    gtagaccatca 157
              |||||||||||
Sbjct: 682189 gtagaccatca 682199

 Score =  147 bits (74), Expect = 9e-36
 Identities = 80/82 (97%)
 Strand = Plus / Plus

                                                                          
Query: 205    tcgtgcggtttggaggaatagaccagcgccggcatcaccgtgatgccgtcgacgccgacc 264
              |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 682247 tcgtgcggcttggaggaatagaccagcgccggcatcaccatgatgccgtcgacgccgacc 682306

                                    
Query: 265    cgctccaccgccttggccacct 286
              ||||||||||||||||||||||
Sbjct: 682307 cgctccaccgccttggccacct 682328

 Score = 40.1 bits (20), Expect = 0.001
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 47      tgtcgccggagctgtccttg 66
               ||||||||||||||||||||
Sbjct: 1035703 tgtcgccggagctgtccttg 1035684

 Score = 34.2 bits (17), Expect = 0.090
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 59      tgtccttgaagcagacg 75
               |||||||||||||||||
Sbjct: 4519425 tgtccttgaagcagacg 4519409

 Score = 32.2 bits (16), Expect = 0.35
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                              
Query: 258    gccgacccgctccacc 273
              ||||||||||||||||
Sbjct: 477987 gccgacccgctccacc 477972

 Score = 32.2 bits (16), Expect = 0.35
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                              
Query: 80     tctcgcagtcggccag 95
              ||||||||||||||||
Sbjct: 716837 tctcgcagtcggccag 716852

 Score = 32.2 bits (16), Expect = 0.35
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                              
Query: 268    tccaccgccttggcca 283
              ||||||||||||||||
Sbjct: 768255 tccaccgccttggcca 768270

 Score = 32.2 bits (16), Expect = 0.35
 Identities = 22/24 (91%)
 Strand = Plus / Plus

                                       
Query: 238     atcaccgtgatgccgtcgacgccg 261
               |||||| ||||||||||| |||||
Sbjct: 1229628 atcaccatgatgccgtcgccgccg 1229651

 Score = 32.2 bits (16), Expect = 0.35
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 270     caccgccttggccacc 285
               ||||||||||||||||
Sbjct: 1575794 caccgccttggccacc 1575779

 Score = 32.2 bits (16), Expect = 0.35
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 256     acgccgacccgctcca 271
               ||||||||||||||||
Sbjct: 1754034 acgccgacccgctcca 1754019

 Score = 32.2 bits (16), Expect = 0.35
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 224     agaccagcgccggcat 239
               ||||||||||||||||
Sbjct: 2376853 agaccagcgccggcat 2376868

 Score = 32.2 bits (16), Expect = 0.35
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 270     caccgccttggccacc 285
               ||||||||||||||||
Sbjct: 3165589 caccgccttggccacc 3165604

 Score = 32.2 bits (16), Expect = 0.35
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 249     gccgtcgacgccgacc 264
               ||||||||||||||||
Sbjct: 3359339 gccgtcgacgccgacc 3359324

 Score = 32.2 bits (16), Expect = 0.35
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 256     acgccgacccgctcca 271
               ||||||||||||||||
Sbjct: 3485486 acgccgacccgctcca 3485501

 Score = 32.2 bits (16), Expect = 0.35
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 231     cgccggcatcaccgtgatgc 250
               ||||||||||||| ||||||
Sbjct: 3821048 cgccggcatcaccctgatgc 3821067

 Score = 32.2 bits (16), Expect = 0.35
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 261     gacccgctccaccgcc 276
               ||||||||||||||||
Sbjct: 3970232 gacccgctccaccgcc 3970217

 Score = 32.2 bits (16), Expect = 0.35
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 231     cgccggcatcaccgtg 246
               ||||||||||||||||
Sbjct: 4172647 cgccggcatcaccgtg 4172662

 Score = 32.2 bits (16), Expect = 0.35
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 45      ggtgtcgccggagctg 60
               ||||||||||||||||
Sbjct: 5127585 ggtgtcgccggagctg 5127570

 Score = 32.2 bits (16), Expect = 0.35
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 138     cgggttgttgtagaccatca 157
               |||||||||||||| |||||
Sbjct: 6044870 cgggttgttgtagagcatca 6044889

 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 254    cgacgccgacccgct 268
              |||||||||||||||
Sbjct: 107548 cgacgccgacccgct 107534

 Score = 30.2 bits (15), Expect = 1.4
 Identities = 21/23 (91%)
 Strand = Plus / Plus

                                     
Query: 29     cgtcgatgaagcggcgggtgtcg 51
              ||||||||| | |||||||||||
Sbjct: 314674 cgtcgatgaggtggcgggtgtcg 314696

 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 50     cgccggagctgtcct 64
              |||||||||||||||
Sbjct: 468882 cgccggagctgtcct 468868

 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 259    ccgacccgctccacc 273
              |||||||||||||||
Sbjct: 495125 ccgacccgctccacc 495111

 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 253    tcgacgccgacccgc 267
              |||||||||||||||
Sbjct: 878675 tcgacgccgacccgc 878661

 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 110    ccggggtgacatcgt 124
              |||||||||||||||
Sbjct: 891117 ccggggtgacatcgt 891103

 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 224     agaccagcgccggca 238
               |||||||||||||||
Sbjct: 1170385 agaccagcgccggca 1170399

 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 253     tcgacgccgacccgc 267
               |||||||||||||||
Sbjct: 1946683 tcgacgccgacccgc 1946669

 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 142     ttgttgtagaccatc 156
               |||||||||||||||
Sbjct: 1967549 ttgttgtagaccatc 1967535

 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 248     tgccgtcgacgccga 262
               |||||||||||||||
Sbjct: 2178782 tgccgtcgacgccga 2178796

 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 227     ccagcgccggcatca 241
               |||||||||||||||
Sbjct: 3151688 ccagcgccggcatca 3151674

 Score = 30.2 bits (15), Expect = 1.4
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 76      atgttctcgcagtcggcca 94
               |||| ||||||||||||||
Sbjct: 3338214 atgtcctcgcagtcggcca 3338196

 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 269     ccaccgccttggcca 283
               |||||||||||||||
Sbjct: 3474515 ccaccgccttggcca 3474529

 Score = 30.2 bits (15), Expect = 1.4
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 243     cgtgatgccgtcgacgccg 261
               ||||| |||||||||||||
Sbjct: 3540540 cgtgaggccgtcgacgccg 3540558

 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 233     ccggcatcaccgtga 247
               |||||||||||||||
Sbjct: 3555748 ccggcatcaccgtga 3555762

 Score = 30.2 bits (15), Expect = 1.4
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 226     accagcgccggcatcaccg 244
               ||||||| |||||||||||
Sbjct: 5991681 accagcggcggcatcaccg 5991699

 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 138     cgggttgttgtagac 152
               |||||||||||||||
Sbjct: 6345919 cgggttgttgtagac 6345933

 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 48      gtcgccggagctgtc 62
               |||||||||||||||
Sbjct: 6480375 gtcgccggagctgtc 6480389

 Score = 30.2 bits (15), Expect = 1.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 91      gccagggaaaccagg 105
               |||||||||||||||
Sbjct: 6494429 gccagggaaaccagg 6494415

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 249    gccgtcgacgccga 262
              ||||||||||||||
Sbjct: 263007 gccgtcgacgccga 262994

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                
Query: 226    accagcgccggcatcacc 243
              ||||||||||||| ||||
Sbjct: 303167 accagcgccggcagcacc 303150

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 62     ccttgaagcagacg 75
              ||||||||||||||
Sbjct: 348149 ccttgaagcagacg 348136

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 150    gaccatcatctgca 163
              ||||||||||||||
Sbjct: 353881 gaccatcatctgca 353868

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 250    ccgtcgacgccgac 263
              ||||||||||||||
Sbjct: 440526 ccgtcgacgccgac 440539

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                
Query: 256    acgccgacccgctccacc 273
              ||||||||||||| ||||
Sbjct: 498317 acgccgacccgctgcacc 498300

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 231    cgccggcatcaccg 244
              ||||||||||||||
Sbjct: 576371 cgccggcatcaccg 576384

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 246    gatgccgtcgacgc 259
              ||||||||||||||
Sbjct: 684347 gatgccgtcgacgc 684360

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 17/18 (94%)
 Strand = Plus / Plus

                                
Query: 227    ccagcgccggcatcaccg 244
              ||||||||||| ||||||
Sbjct: 701445 ccagcgccggcctcaccg 701462

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 271    accgccttggccac 284
              ||||||||||||||
Sbjct: 713180 accgccttggccac 713167

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 270    caccgccttggcca 283
              ||||||||||||||
Sbjct: 796182 caccgccttggcca 796169

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 40     cggcgggtgtcgcc 53
              ||||||||||||||
Sbjct: 881730 cggcgggtgtcgcc 881717

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 104    ggatgtccggggtg 117
              ||||||||||||||
Sbjct: 955456 ggatgtccggggtg 955443

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 152    ccatcatctgcagg 165
              ||||||||||||||
Sbjct: 988622 ccatcatctgcagg 988609

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 230     gcgccggcatcacc 243
               ||||||||||||||
Sbjct: 1191849 gcgccggcatcacc 1191862

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 269     ccaccgccttggcc 282
               ||||||||||||||
Sbjct: 1414115 ccaccgccttggcc 1414128

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 228     cagcgccggcatca 241
               ||||||||||||||
Sbjct: 1415419 cagcgccggcatca 1415406

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 91      gccagggaaaccag 104
               ||||||||||||||
Sbjct: 1471650 gccagggaaaccag 1471663

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 105     gatgtccggggtga 118
               ||||||||||||||
Sbjct: 1481836 gatgtccggggtga 1481823

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                 
Query: 149     agaccatcatctgcaggc 166
               |||||| |||||||||||
Sbjct: 1783854 agaccagcatctgcaggc 1783837

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 85      cagtcggccaggga 98
               ||||||||||||||
Sbjct: 1859093 cagtcggccaggga 1859106

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 262     acccgctccaccgc 275
               ||||||||||||||
Sbjct: 1888342 acccgctccaccgc 1888355

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 47      tgtcgccggagctg 60
               ||||||||||||||
Sbjct: 1954812 tgtcgccggagctg 1954799

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 222     atagaccagcgccg 235
               ||||||||||||||
Sbjct: 1977331 atagaccagcgccg 1977344

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 258     gccgacccgctcca 271
               ||||||||||||||
Sbjct: 2001628 gccgacccgctcca 2001615

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 36      gaagcggcgggtgt 49
               ||||||||||||||
Sbjct: 2074982 gaagcggcgggtgt 2074995

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 248     tgccgtcgacgccg 261
               ||||||||||||||
Sbjct: 2189821 tgccgtcgacgccg 2189808

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 254     cgacgccgacccgc 267
               ||||||||||||||
Sbjct: 2246230 cgacgccgacccgc 2246243

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 266     gctccaccgccttg 279
               ||||||||||||||
Sbjct: 2313071 gctccaccgccttg 2313084

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 141     gttgttgtagacca 154
               ||||||||||||||
Sbjct: 2350915 gttgttgtagacca 2350902

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 226     accagcgccggcat 239
               ||||||||||||||
Sbjct: 2384422 accagcgccggcat 2384435

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 125     tccggtagatcggc 138
               ||||||||||||||
Sbjct: 2429951 tccggtagatcggc 2429964

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 230     gcgccggcatcacc 243
               ||||||||||||||
Sbjct: 2562143 gcgccggcatcacc 2562156

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 269     ccaccgccttggcc 282
               ||||||||||||||
Sbjct: 2640206 ccaccgccttggcc 2640219

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 230     gcgccggcatcacc 243
               ||||||||||||||
Sbjct: 2693459 gcgccggcatcacc 2693446

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 258     gccgacccgctcca 271
               ||||||||||||||
Sbjct: 2702962 gccgacccgctcca 2702949

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 224     agaccagcgccggc 237
               ||||||||||||||
Sbjct: 3059212 agaccagcgccggc 3059199

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 225     gaccagcgccggca 238
               ||||||||||||||
Sbjct: 3462098 gaccagcgccggca 3462085

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 57      gctgtccttgaagc 70
               ||||||||||||||
Sbjct: 3481406 gctgtccttgaagc 3481419

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 234     cggcatcaccgtga 247
               ||||||||||||||
Sbjct: 3734997 cggcatcaccgtga 3734984

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 42      gcgggtgtcgccgg 55
               ||||||||||||||
Sbjct: 3813003 gcgggtgtcgccgg 3813016

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 249     gccgtcgacgccga 262
               ||||||||||||||
Sbjct: 3814586 gccgtcgacgccga 3814599

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                 
Query: 127     cggtagatcggcgggttg 144
               |||| |||||||||||||
Sbjct: 4001821 cggtcgatcggcgggttg 4001804

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 227     ccagcgccggcatc 240
               ||||||||||||||
Sbjct: 4025185 ccagcgccggcatc 4025172

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 249     gccgtcgacgccga 262
               ||||||||||||||
Sbjct: 4083534 gccgtcgacgccga 4083547

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 96      ggaaaccaggatgt 109
               ||||||||||||||
Sbjct: 4104512 ggaaaccaggatgt 4104525

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 29      cgtcgatgaagcgg 42
               ||||||||||||||
Sbjct: 4347527 cgtcgatgaagcgg 4347540

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 225     gaccagcgccggca 238
               ||||||||||||||
Sbjct: 4472543 gaccagcgccggca 4472556

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                 
Query: 256     acgccgacccgctccacc 273
               |||||||||||| |||||
Sbjct: 4482500 acgccgacccgcgccacc 4482483

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 225     gaccagcgccggca 238
               ||||||||||||||
Sbjct: 4577502 gaccagcgccggca 4577515

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 72      gacgatgttctcgc 85
               ||||||||||||||
Sbjct: 4860156 gacgatgttctcgc 4860169

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 82      tcgcagtcggccag 95
               ||||||||||||||
Sbjct: 4913491 tcgcagtcggccag 4913478

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 20/22 (90%)
 Strand = Plus / Minus

                                     
Query: 244     gtgatgccgtcgacgccgaccc 265
               |||| ||||| |||||||||||
Sbjct: 4958561 gtgacgccgtagacgccgaccc 4958540

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 57      gctgtccttgaagc 70
               ||||||||||||||
Sbjct: 5112549 gctgtccttgaagc 5112562

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 20/22 (90%)
 Strand = Plus / Plus

                                     
Query: 75      gatgttctcgcagtcggccagg 96
               ||||||||||| | ||||||||
Sbjct: 5132803 gatgttctcgccgccggccagg 5132824

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 272     ccgccttggccacc 285
               ||||||||||||||
Sbjct: 5145075 ccgccttggccacc 5145088

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 231     cgccggcatcaccg 244
               ||||||||||||||
Sbjct: 5234766 cgccggcatcaccg 5234779

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 248     tgccgtcgacgccg 261
               ||||||||||||||
Sbjct: 5237445 tgccgtcgacgccg 5237458

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 83      cgcagtcggccagg 96
               ||||||||||||||
Sbjct: 5495115 cgcagtcggccagg 5495102

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 251     cgtcgacgccgacc 264
               ||||||||||||||
Sbjct: 5551252 cgtcgacgccgacc 5551239

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 239     tcaccgtgatgccg 252
               ||||||||||||||
Sbjct: 5631669 tcaccgtgatgccg 5631656

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 269     ccaccgccttggcc 282
               ||||||||||||||
Sbjct: 5655564 ccaccgccttggcc 5655577

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 231     cgccggcatcaccg 244
               ||||||||||||||
Sbjct: 5714750 cgccggcatcaccg 5714737

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 239     tcaccgtgatgccg 252
               ||||||||||||||
Sbjct: 5754809 tcaccgtgatgccg 5754796

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 226     accagcgccggcat 239
               ||||||||||||||
Sbjct: 5792896 accagcgccggcat 5792909

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 231     cgccggcatcaccg 244
               ||||||||||||||
Sbjct: 5820297 cgccggcatcaccg 5820310

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 256     acgccgacccgctc 269
               ||||||||||||||
Sbjct: 5912838 acgccgacccgctc 5912825

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                 
Query: 227     ccagcgccggcatcaccg 244
               ||||| ||||||||||||
Sbjct: 5928426 ccagcaccggcatcaccg 5928409

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 249     gccgtcgacgccga 262
               ||||||||||||||
Sbjct: 6055912 gccgtcgacgccga 6055899

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 30      gtcgatgaagcggc 43
               ||||||||||||||
Sbjct: 6064087 gtcgatgaagcggc 6064100

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 225     gaccagcgccggca 238
               ||||||||||||||
Sbjct: 6077815 gaccagcgccggca 6077828

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 72      gacgatgttctcgc 85
               ||||||||||||||
Sbjct: 6378874 gacgatgttctcgc 6378861

 Score = 28.2 bits (14), Expect = 5.5
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 269     ccaccgccttggcc 282
               ||||||||||||||
Sbjct: 6522884 ccaccgccttggcc 6522871
  Database: pa14
    Posted date:  Jan 15, 2004  3:01 PM
  Number of letters in database: 6,534,396
  Number of sequences in database:  1
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3333
Number of Sequences: 1
Number of extensions: 3333
Number of successful extensions: 111
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 111
length of query: 286
length of database: 6,534,396
effective HSP length: 16
effective length of query: 270
effective length of database: 6,534,380
effective search space: 1764282600
effective search space used: 1764282600
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)