BLAST Search Results

BLASTN 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: pa14 
           1 sequences; 6,534,396 total letters



Query= 
         (904 letters)

Distribution of 104 Blast Hits on the Query Sequence



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GCTS_68                                                           775   0.0   

>GCTS_68 
          Length = 6534396

 Score =  775 bits (391), Expect = 0.0
 Identities = 573/623 (91%), Gaps = 8/623 (1%)
 Strand = Plus / Minus

                                                                           
Query: 58      tacgagggcacccacgatgtccacgcgctgatcctcggccgcgcgcagaccggcatccag 117
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6317411 tacgagggcacccacgatgtccacgcgctgatcctcggccgcgcgcagaccggcatccag 6317352

                                                                           
Query: 118     gcattcttctgagccaccgagcaacaccccggcgcgctttttcacggtagcgcgccggcc 177
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6317351 gcattcttctgagccaccgagcaacaccccggcgcgctttttcacggtagcgcgccggcc 6317292

                                                                           
Query: 178     gccggggagacgggcaaggaacccgtcttcccggccatttccgtttccagcccccagcag 237
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6317291 gccggggagacgggcaaggaacccgtcttcccggccatttccgtttccagcccccagcag 6317232

                                                                           
Query: 238     cgagaaccgtcatgcccggcgcccttatccttagccgggctgtccacctgtcccgtgtcc 297
               ||||||||||||||||||||||||||  || || ||| |   || |||||||||||||||
Sbjct: 6317231 cgagaaccgtcatgcccggcgccctttcccatatccgcgtactcgacctgtcccgtgtcc 6317172

                                                                           
Query: 298     tggccggcccttgggccgggcagattctcgccgacctcggcgccgaggtgatcaagatcg 357
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6317171 tggccggcccttgggccgggcagattctcgccgacctcggcgccgaggtgatcaagatcg 6317112

                                                                           
Query: 358     agcgccccggcagctgcgacacacacccgctcctggggtccgccgttcctcaaggatgcc 417
               |||||||||||||| |||||  |||||||| ||||||| |||||||||||||||||||||
Sbjct: 6317111 agcgccccggcagcggcgac-gacacccgcgcctggggcccgccgttcctcaaggatgcc 6317053

                                                                           
Query: 418     gaaggcaatcgactccagcgaggcggccttctacctgtcggccaaccgccataagaagtc 477
               |||||||| |||| ||||||||||||||| ||||||||||||||||||| | ||||||||
Sbjct: 6317052 gaaggcaa-cgacaccagcgaggcggcctactacctgtcggccaaccgcaacaagaagtc 6316994

                                                                           
Query: 478     ggtgacggttgacttcacccaaccggaaggatcacccatcgttcgcgaattggcggcc-a 536
               ||||||||| ||||||||||| ||||||||    | |||||||||||||||||||||| |
Sbjct: 6316993 ggtgacggtggacttcacccagccggaaggccagcgcatcgttcgcgaattggcggccaa 6316934

                                                                           
Query: 537     cgacgacatcctggctgagaactccaaggtcggcggactc-aggcctatggcctcgacta 595
                | ||||||||||   ||||||| |||||||||||| ||| |||||||||||||||||||
Sbjct: 6316933 ggccgacatcctgctggagaacttcaaggtcggcgggctcaaggcctatggcctcgacta 6316874

                                                                           
Query: 596     tgaatcctctgataca-gtctacccgtaatcttatctactgttcgatcaccgggtttcgc 654
               ||||| | ||||  || ||| ||||| || || |||||||||||||||||||| ||  ||
Sbjct: 6316873 tgaat-cgctgaagcaggtcaacccg-aagctgatctactgttcgatcaccggcttcggc 6316816

                                      
Query: 655     cagtcttggcccctatgtcaagc 677
               |||||  |||||||||| |||||
Sbjct: 6316815 cagtc-cggcccctatgccaagc 6316794




 Score = 46.1 bits (23), Expect = 8e-05
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 327     gccgacctcggcgccgaggtgatcaag 353
               ||||||| |||||||||||||||||||
Sbjct: 3422613 gccgaccacggcgccgaggtgatcaag 3422587




 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                        
Query: 327    gccgacctcggcgccgaggtgatcaagatcgagcgccccggc 368
              ||||| ||||||||   ||||||||||||||| |||||||||
Sbjct: 266781 gccgatctcggcgcgcgggtgatcaagatcgaacgccccggc 266822




 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 334     tcggcgccgaggtgatcaagatcgag 359
               |||||||||| |||||||||||||||
Sbjct: 3579767 tcggcgccgaagtgatcaagatcgag 3579792




 Score = 38.2 bits (19), Expect = 0.019
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                          
Query: 324     ctcgccgacctcggcgccgaggtgatc 350
               |||||||||||| ||||||||| ||||
Sbjct: 6447713 ctcgccgacctcagcgccgaggagatc 6447687




 Score = 36.2 bits (18), Expect = 0.075
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 139    caacaccccggcgcgctt 156
              ||||||||||||||||||
Sbjct: 274805 caacaccccggcgcgctt 274822




 Score = 36.2 bits (18), Expect = 0.075
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 80      acgcgctgatcctcggcc 97
               ||||||||||||||||||
Sbjct: 4438357 acgcgctgatcctcggcc 4438340




 Score = 34.2 bits (17), Expect = 0.30
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                               
Query: 433    cagcgaggcggccttct 449
              |||||||||||||||||
Sbjct: 737623 cagcgaggcggccttct 737639




 Score = 34.2 bits (17), Expect = 0.30
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                               
Query: 81     cgcgctgatcctcggcc 97
              |||||||||||||||||
Sbjct: 995116 cgcgctgatcctcggcc 995100




 Score = 34.2 bits (17), Expect = 0.30
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 245     cgtcatgcccggcgccc 261
               |||||||||||||||||
Sbjct: 1507157 cgtcatgcccggcgccc 1507173




 Score = 34.2 bits (17), Expect = 0.30
 Identities = 20/21 (95%)
 Strand = Plus / Minus

                                    
Query: 323     tctcgccgacctcggcgccga 343
               |||||||| ||||||||||||
Sbjct: 1537633 tctcgccggcctcggcgccga 1537613




 Score = 34.2 bits (17), Expect = 0.30
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 81      cgcgctgatcctcggcc 97
               |||||||||||||||||
Sbjct: 3403748 cgcgctgatcctcggcc 3403764




 Score = 34.2 bits (17), Expect = 0.30
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 311     ggccgggcagattctcg 327
               |||||||||||||||||
Sbjct: 4260623 ggccgggcagattctcg 4260607




 Score = 34.2 bits (17), Expect = 0.30
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 321     attctcgccgacctcgg 337
               |||||||||||||||||
Sbjct: 5149152 attctcgccgacctcgg 5149168




 Score = 34.2 bits (17), Expect = 0.30
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 337     gcgccgaggtgatcaag 353
               |||||||||||||||||
Sbjct: 5568407 gcgccgaggtgatcaag 5568391




 Score = 34.2 bits (17), Expect = 0.30
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 324     ctcgccgacctcggcgc 340
               |||||||||||||||||
Sbjct: 5613133 ctcgccgacctcggcgc 5613117




 Score = 34.2 bits (17), Expect = 0.30
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 168     cgcgccggccgccgggg 184
               |||||||||||||||||
Sbjct: 6275662 cgcgccggccgccgggg 6275646




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                             
Query: 501   cggaaggatcacccat 516
             ||||||||||||||||
Sbjct: 92581 cggaaggatcacccat 92566




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                              
Query: 323    tctcgccgacctcggc 338
              ||||||||||||||||
Sbjct: 778043 tctcgccgacctcggc 778058




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                              
Query: 324    ctcgccgacctcggcg 339
              ||||||||||||||||
Sbjct: 786111 ctcgccgacctcggcg 786096




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 407     tcaaggatgccgaaggcaat 426
               ||||||||||||| ||||||
Sbjct: 1263573 tcaaggatgccgacggcaat 1263592




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 326     cgccgacctcggcgcc 341
               ||||||||||||||||
Sbjct: 1356109 cgccgacctcggcgcc 1356094




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 439     ggcggccttctacctg 454
               ||||||||||||||||
Sbjct: 1385475 ggcggccttctacctg 1385460




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 81      cgcgctgatcctcggc 96
               ||||||||||||||||
Sbjct: 1621656 cgcgctgatcctcggc 1621671




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 561     caaggtcggcggactc 576
               ||||||||||||||||
Sbjct: 1700271 caaggtcggcggactc 1700256




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 327     gccgacctcggcgccg 342
               ||||||||||||||||
Sbjct: 1882006 gccgacctcggcgccg 1881991




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 291     cgtgtcctggccggcc 306
               ||||||||||||||||
Sbjct: 2324862 cgtgtcctggccggcc 2324847




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                   
Query: 326     cgccgacctcggcgccgagg 345
               |||| |||||||||||||||
Sbjct: 3203867 cgccaacctcggcgccgagg 3203848




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 81      cgcgctgatcctcggc 96
               ||||||||||||||||
Sbjct: 3249605 cgcgctgatcctcggc 3249620




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 86      tgatcctcggccgcgc 101
               ||||||||||||||||
Sbjct: 3325053 tgatcctcggccgcgc 3325068




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 167     gcgcgccggccgccgg 182
               ||||||||||||||||
Sbjct: 3466135 gcgcgccggccgccgg 3466150




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 162     cggtagcgcgccggcc 177
               ||||||||||||||||
Sbjct: 3975288 cggtagcgcgccggcc 3975303




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 328     ccgacctcggcgccga 343
               ||||||||||||||||
Sbjct: 4131732 ccgacctcggcgccga 4131747




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 326     cgccgacctcggcgcc 341
               ||||||||||||||||
Sbjct: 4987250 cgccgacctcggcgcc 4987265




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 327     gccgacctcggcgccg 342
               ||||||||||||||||
Sbjct: 5594509 gccgacctcggcgccg 5594494




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 337     gcgccgaggtgatcaa 352
               ||||||||||||||||
Sbjct: 5882261 gcgccgaggtgatcaa 5882276




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 68      cccacgatgtccacgc 83
               ||||||||||||||||
Sbjct: 6298749 cccacgatgtccacgc 6298734




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 331     acctcggcgccgaggt 346
               ||||||||||||||||
Sbjct: 6317123 acctcggcgccgaggt 6317138




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                            
Query: 170   cgccggccgccgggg 184
             |||||||||||||||
Sbjct: 30034 cgccggccgccgggg 30048




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                
Query: 338   cgccgaggtgatcaagatc 356
             |||||||||||| ||||||
Sbjct: 44196 cgccgaggtgatgaagatc 44214




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                            
Query: 224   ccagcccccagcagc 238
             |||||||||||||||
Sbjct: 70035 ccagcccccagcagc 70021




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 525    aattggcggccacga 539
              |||||||||||||||
Sbjct: 289117 aattggcggccacga 289103




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                 
Query: 172    ccggccgccggggagacgg 190
              |||||||||||||| ||||
Sbjct: 468023 ccggccgccggggacacgg 468005




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 82     gcgctgatcctcggc 96
              |||||||||||||||
Sbjct: 590518 gcgctgatcctcggc 590532




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 333    ctcggcgccgaggtg 347
              |||||||||||||||
Sbjct: 627320 ctcggcgccgaggtg 627306




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 326    cgccgacctcggcgc 340
              |||||||||||||||
Sbjct: 691457 cgccgacctcggcgc 691471




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 333    ctcggcgccgaggtg 347
              |||||||||||||||
Sbjct: 728476 ctcggcgccgaggtg 728462




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 328    ccgacctcggcgccg 342
              |||||||||||||||
Sbjct: 734141 ccgacctcggcgccg 734127




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 83     cgctgatcctcggcc 97
              |||||||||||||||
Sbjct: 745621 cgctgatcctcggcc 745635




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 100    gcgcagaccggcatc 114
              |||||||||||||||
Sbjct: 844113 gcgcagaccggcatc 844127




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 169     gcgccggccgccggg 183
               |||||||||||||||
Sbjct: 1211075 gcgccggccgccggg 1211089




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 95      gccgcgcgcagaccggcat 113
               |||||||||||||| ||||
Sbjct: 1261197 gccgcgcgcagacccgcat 1261179




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 83      cgctgatcctcggcc 97
               |||||||||||||||
Sbjct: 1286299 cgctgatcctcggcc 1286285




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 324     ctcgccgacctcggcgccg 342
               ||||||| |||||||||||
Sbjct: 1511909 ctcgccgccctcggcgccg 1511891




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 296     cctggccggcccttg 310
               |||||||||||||||
Sbjct: 1512967 cctggccggcccttg 1512981




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 161     acggtagcgcgccggccgc 179
               |||| ||||||||||||||
Sbjct: 1604859 acgggagcgcgccggccgc 1604877




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 317     gcagattctcgccga 331
               |||||||||||||||
Sbjct: 1622106 gcagattctcgccga 1622120




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 340     ccgaggtgatcaagatcga 358
               |||| ||||||||||||||
Sbjct: 1659634 ccgacgtgatcaagatcga 1659652




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 325     tcgccgacctcggcg 339
               |||||||||||||||
Sbjct: 1678779 tcgccgacctcggcg 1678793




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 231     ccagcagcgagaacc 245
               |||||||||||||||
Sbjct: 1679295 ccagcagcgagaacc 1679309




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 167     gcgcgccggccgccg 181
               |||||||||||||||
Sbjct: 1836004 gcgcgccggccgccg 1835990




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 329     cgacctcggcgccga 343
               |||||||||||||||
Sbjct: 1873353 cgacctcggcgccga 1873367




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 329     cgacctcggcgccga 343
               |||||||||||||||
Sbjct: 1908215 cgacctcggcgccga 1908229




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 324     ctcgccgacctcggc 338
               |||||||||||||||
Sbjct: 1914992 ctcgccgacctcggc 1914978




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 328     ccgacctcggcgccg 342
               |||||||||||||||
Sbjct: 2062451 ccgacctcggcgccg 2062465




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 21/23 (91%)
 Strand = Plus / Plus

                                      
Query: 174     ggccgccggggagacgggcaagg 196
               ||||||||||||| | |||||||
Sbjct: 2147648 ggccgccggggagcccggcaagg 2147670




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 81      cgcgctgatcctcggccgc 99
               ||||||||||||| |||||
Sbjct: 2174773 cgcgctgatcctctgccgc 2174755




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 431     tccagcgaggcggcc 445
               |||||||||||||||
Sbjct: 2270706 tccagcgaggcggcc 2270692




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 106     accggcatccaggca 120
               |||||||||||||||
Sbjct: 2322487 accggcatccaggca 2322473




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 632     actgttcgatcaccgggtt 650
               |||| ||||||||||||||
Sbjct: 2493093 actggtcgatcaccgggtt 2493075




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 445     cttctacctgtcggc 459
               |||||||||||||||
Sbjct: 2493599 cttctacctgtcggc 2493613




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 325     tcgccgacctcggcg 339
               |||||||||||||||
Sbjct: 2592656 tcgccgacctcggcg 2592642




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 405     cctcaaggatgccga 419
               |||||||||||||||
Sbjct: 2870162 cctcaaggatgccga 2870176




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 286     tgtcccgtgtcctgg 300
               |||||||||||||||
Sbjct: 2996713 tgtcccgtgtcctgg 2996699




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 81      cgcgctgatcctcgg 95
               |||||||||||||||
Sbjct: 3051150 cgcgctgatcctcgg 3051164




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 166     agcgcgccggccgcc 180
               |||||||||||||||
Sbjct: 3172091 agcgcgccggccgcc 3172105




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 332     cctcggcgccgaggt 346
               |||||||||||||||
Sbjct: 3203848 cctcggcgccgaggt 3203862




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 79      cacgcgctgatcctcggcc 97
               |||||||||||||| ||||
Sbjct: 3402815 cacgcgctgatcctgggcc 3402833




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 324     ctcgccgacctcggc 338
               |||||||||||||||
Sbjct: 3630013 ctcgccgacctcggc 3630027




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 438     aggcggccttctacc 452
               |||||||||||||||
Sbjct: 3944130 aggcggccttctacc 3944144




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 333     ctcggcgccgaggtg 347
               |||||||||||||||
Sbjct: 3970560 ctcggcgccgaggtg 3970574




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 325     tcgccgacctcggcgccga 343
               |||||||||||| ||||||
Sbjct: 3985134 tcgccgacctcgccgccga 3985152




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 325     tcgccgacctcggcgccga 343
               ||||||| |||||||||||
Sbjct: 4011325 tcgccgaactcggcgccga 4011343




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 325     tcgccgacctcggcg 339
               |||||||||||||||
Sbjct: 4068980 tcgccgacctcggcg 4068966




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 338     cgccgaggtgatcaa 352
               |||||||||||||||
Sbjct: 4078298 cgccgaggtgatcaa 4078284




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 536     acgacgacatcctgg 550
               |||||||||||||||
Sbjct: 4300611 acgacgacatcctgg 4300597




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 322     ttctcgccgacctcg 336
               |||||||||||||||
Sbjct: 4307963 ttctcgccgacctcg 4307949




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 243     accgtcatgcccggc 257
               |||||||||||||||
Sbjct: 4504298 accgtcatgcccggc 4504312




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 296     cctggccggcccttg 310
               |||||||||||||||
Sbjct: 4702161 cctggccggcccttg 4702147




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 104     agaccggcatccagg 118
               |||||||||||||||
Sbjct: 4793466 agaccggcatccagg 4793480




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 340     ccgaggtgatcaaga 354
               |||||||||||||||
Sbjct: 4810929 ccgaggtgatcaaga 4810915




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 271     gccgggctgtccacc 285
               |||||||||||||||
Sbjct: 4840583 gccgggctgtccacc 4840569




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 98      gcgcgcagaccggca 112
               |||||||||||||||
Sbjct: 4847479 gcgcgcagaccggca 4847465




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 324     ctcgccgacctcggc 338
               |||||||||||||||
Sbjct: 4976920 ctcgccgacctcggc 4976934




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 80      acgcgctgatcctcg 94
               |||||||||||||||
Sbjct: 4999377 acgcgctgatcctcg 4999391




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 533     gccacgacgacatcctggc 551
               |||| ||||||||||||||
Sbjct: 5005918 gccaggacgacatcctggc 5005936




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 399     gccgttcctcaagga 413
               |||||||||||||||
Sbjct: 5035327 gccgttcctcaagga 5035313




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 167     gcgcgccggccgccg 181
               |||||||||||||||
Sbjct: 5037150 gcgcgccggccgccg 5037136




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 139     caacaccccggcgcg 153
               |||||||||||||||
Sbjct: 5086285 caacaccccggcgcg 5086271




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 428     gactccagcgaggcg 442
               |||||||||||||||
Sbjct: 5657252 gactccagcgaggcg 5657238




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 336     ggcgccgaggtgatc 350
               |||||||||||||||
Sbjct: 5839982 ggcgccgaggtgatc 5839968




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 89      tcctcggccgcgcgc 103
               |||||||||||||||
Sbjct: 5935391 tcctcggccgcgcgc 5935377




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 357     gagcgccccggcagc 371
               |||||||||||||||
Sbjct: 5955680 gagcgccccggcagc 5955666




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 81      cgcgctgatcctcggccgc 99
               ||||||||||| |||||||
Sbjct: 6022954 cgcgctgatccccggccgc 6022972




  Database: pa14
    Posted date:  Jan 15, 2004  3:01 PM
  Number of letters in database: 6,534,396
  Number of sequences in database:  1
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7569
Number of Sequences: 1
Number of extensions: 7569
Number of successful extensions: 111
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 106
length of query: 904
length of database: 6,534,396
effective HSP length: 16
effective length of query: 888
effective length of database: 6,534,380
effective search space: 5802529440
effective search space used: 5802529440
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)