BLAST Search Results

BLASTN 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: pa14 
           1 sequences; 6,534,396 total letters



Query= 
         (870 letters)

Distribution of 91 Blast Hits on the Query Sequence



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GCTS_68                                                           755   0.0   

>GCTS_68 
          Length = 6534396

 Score =  755 bits (381), Expect = 0.0
 Identities = 450/469 (95%), Gaps = 3/469 (0%)
 Strand = Plus / Plus

                                                                           
Query: 57      tacctcggcctcggcagcaatgtcgagcgtgagcgccacctgcgtgccggcctcgatgcg 116
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6455598 tacctcggcctcggcagcaatgtcgagcgtgagcgccacctgcgtgccggcctcgatgcg 6455657

                                                                           
Query: 117     ctggccggtttccttcatgacccgcgttgctcgccggtgttcgagagcgagccggtgggt 176
               |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 6455658 ctggccggtttccttcatgacctgcgttgctcgccggtgttcgagagcgagccggtgggt 6455717

                                                                           
Query: 177     atcaagagcgggccgttcttcaacctggtggtgtctgcccgcaccgatctgccgctggcc 236
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6455718 atcaagagcgggccgttcttcaacctggtggtgtctgcccgcaccgatctgccgctggcc 6455777

                                                                           
Query: 237     gaactgagcctgcgactcaagcacatcgaggccgacaatggccgctatgcgccagagcgc 296
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6455778 gaactgagcctgcgactcaagcacatcgaggccgacaatggccgctatgcgccagagcgc 6455837

                                                                           
Query: 297     aagggactgccgctggatatcgacgtgctgttctacggcgacctggggggcgatttcgat 356
               |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 6455838 aagggactgccgctggatatcgacgtgctgttctacggcgacctggtgggcgatttcgat 6455897

                                                                           
Query: 357     ggcctggtgctgccgcgcgccgatagtgctgaagaatgctttcgtgctctggcccttgtc 416
               ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 6455898 ggcctggtgctgccgcgcgccga-agtgctgaagaatgctttcgtgctctggcccttgtc 6455956

                                                                           
Query: 417     cgatctggcgcctaacctggagcatccggttcgcccgccacccgctgggcgattttctgt 476
               ||| |||||||| |||||||||||||||| |||||||||| ||||||||||| | |||| 
Sbjct: 6455957 cgagctggcgccgaacctggagcatccgg-tcgcccgccagccgctgggcga-tctctgg 6456014

                                                                
Query: 477     ctgatgacgaggatccagcaaaatatctggacggcgccattccaatggc 525
               |    ||||||||||||||| ||  ||||| ||||||||||| ||||||
Sbjct: 6456015 cgcgagacgaggatccagcagaagctctggccggcgccattcgaatggc 6456063




 Score = 36.2 bits (18), Expect = 0.072
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 225     ctgccgctggccgaactg 242
               ||||||||||||||||||
Sbjct: 3380628 ctgccgctggccgaactg 3380645




 Score = 34.2 bits (17), Expect = 0.28
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                              
Query: 108   ctcgatgcgctggccgg 124
             |||||||||||||||||
Sbjct: 26855 ctcgatgcgctggccgg 26839




 Score = 34.2 bits (17), Expect = 0.28
 Identities = 20/21 (95%)
 Strand = Plus / Plus

                                   
Query: 105    ggcctcgatgcgctggccggt 125
              |||||||||||||| ||||||
Sbjct: 781626 ggcctcgatgcgcttgccggt 781646




 Score = 34.2 bits (17), Expect = 0.28
 Identities = 20/21 (95%)
 Strand = Plus / Plus

                                    
Query: 94      acctgcgtgccggcctcgatg 114
               |||||| ||||||||||||||
Sbjct: 1000190 acctgcttgccggcctcgatg 1000210




 Score = 34.2 bits (17), Expect = 0.28
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 104     cggcctcgatgcgctgg 120
               |||||||||||||||||
Sbjct: 2809571 cggcctcgatgcgctgg 2809587




 Score = 34.2 bits (17), Expect = 0.28
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 107     cctcgatgcgctggccg 123
               |||||||||||||||||
Sbjct: 3215623 cctcgatgcgctggccg 3215607




 Score = 34.2 bits (17), Expect = 0.28
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 364     tgctgccgcgcgccgat 380
               |||||||||||||||||
Sbjct: 3423379 tgctgccgcgcgccgat 3423363




 Score = 34.2 bits (17), Expect = 0.28
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 321     gtgctgttctacggcga 337
               |||||||||||||||||
Sbjct: 4139812 gtgctgttctacggcga 4139796




 Score = 34.2 bits (17), Expect = 0.28
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 247     tgcgactcaagcacatc 263
               |||||||||||||||||
Sbjct: 4555307 tgcgactcaagcacatc 4555323




 Score = 34.2 bits (17), Expect = 0.28
 Identities = 20/21 (95%)
 Strand = Plus / Minus

                                    
Query: 101     tgccggcctcgatgcgctggc 121
               ||||||||||||| |||||||
Sbjct: 4655937 tgccggcctcgatccgctggc 4655917




 Score = 34.2 bits (17), Expect = 0.28
 Identities = 20/21 (95%)
 Strand = Plus / Minus

                                    
Query: 98      gcgtgccggcctcgatgcgct 118
               |||||||||||||| ||||||
Sbjct: 4760660 gcgtgccggcctcgctgcgct 4760640




 Score = 34.2 bits (17), Expect = 0.28
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 185     cgggccgttcttcaacc 201
               |||||||||||||||||
Sbjct: 5755547 cgggccgttcttcaacc 5755563




 Score = 34.2 bits (17), Expect = 0.28
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 104     cggcctcgatgcgctgg 120
               |||||||||||||||||
Sbjct: 6000758 cggcctcgatgcgctgg 6000774




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                  
Query: 220    ccgatctgccgctggccgaa 239
              |||| |||||||||||||||
Sbjct: 115673 ccgacctgccgctggccgaa 115654




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                              
Query: 323    gctgttctacggcgac 338
              ||||||||||||||||
Sbjct: 302733 gctgttctacggcgac 302748




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                              
Query: 106    gcctcgatgcgctggc 121
              ||||||||||||||||
Sbjct: 655576 gcctcgatgcgctggc 655591




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                              
Query: 311    ggatatcgacgtgctg 326
              ||||||||||||||||
Sbjct: 761557 ggatatcgacgtgctg 761572




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                              
Query: 102    gccggcctcgatgcgc 117
              ||||||||||||||||
Sbjct: 790372 gccggcctcgatgcgc 790387




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 102     gccggcctcgatgcgctggc 121
               |||||| |||||||||||||
Sbjct: 1081323 gccggcgtcgatgcgctggc 1081342




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 109     tcgatgcgctggccggtttc 128
               ||||||| ||||||||||||
Sbjct: 1252891 tcgatgccctggccggtttc 1252910




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 225     ctgccgctggccgaac 240
               ||||||||||||||||
Sbjct: 1471582 ctgccgctggccgaac 1471567




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 304     tgccgctggatatcga 319
               ||||||||||||||||
Sbjct: 1976915 tgccgctggatatcga 1976900




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 235     ccgaactgagcctgcg 250
               ||||||||||||||||
Sbjct: 2121952 ccgaactgagcctgcg 2121937




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 97      tgcgtgccggcctcga 112
               ||||||||||||||||
Sbjct: 2171649 tgcgtgccggcctcga 2171664




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                   
Query: 358     gcctggtgctgccgcgcgcc 377
               |||||| |||||||||||||
Sbjct: 2189332 gcctggagctgccgcgcgcc 2189313




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 227     gccgctggccgaactg 242
               ||||||||||||||||
Sbjct: 2226256 gccgctggccgaactg 2226241




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 191     gttcttcaacctggtg 206
               ||||||||||||||||
Sbjct: 2779975 gttcttcaacctggtg 2779960




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 104     cggcctcgatgcgctggccg 123
               |||||| |||||||||||||
Sbjct: 3348748 cggcctggatgcgctggccg 3348767




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 156     ttcgagagcgagccggtggg 175
               ||||||| ||||||||||||
Sbjct: 3368108 ttcgagaccgagccggtggg 3368127




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 326     gttctacggcgacctg 341
               ||||||||||||||||
Sbjct: 3398043 gttctacggcgacctg 3398028




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 366     ctgccgcgcgccgata 381
               ||||||||||||||||
Sbjct: 3447225 ctgccgcgcgccgata 3447210




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 102     gccggcctcgatgcgc 117
               ||||||||||||||||
Sbjct: 3765776 gccggcctcgatgcgc 3765791




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 108     ctcgatgcgctggccg 123
               ||||||||||||||||
Sbjct: 4165365 ctcgatgcgctggccg 4165380




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 138     ccgcgttgctcgccgg 153
               ||||||||||||||||
Sbjct: 4278573 ccgcgttgctcgccgg 4278588




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 234     gccgaactgagcctgc 249
               ||||||||||||||||
Sbjct: 4695862 gccgaactgagcctgc 4695877




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 22/24 (91%)
 Strand = Plus / Minus

                                       
Query: 438     gcatccggttcgcccgccacccgc 461
               |||||| |||| ||||||||||||
Sbjct: 4939624 gcatccagttcccccgccacccgc 4939601




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 103     ccggcctcgatgcgct 118
               ||||||||||||||||
Sbjct: 5006287 ccggcctcgatgcgct 5006272




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 369     ccgcgcgccgatagtgctga 388
               |||||||||||| |||||||
Sbjct: 5502033 ccgcgcgccgatggtgctga 5502052




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 451     ccgccacccgctgggc 466
               ||||||||||||||||
Sbjct: 5894417 ccgccacccgctgggc 5894432




 Score = 32.2 bits (16), Expect = 1.1
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 114     gcgctggccggtttccttca 133
               |||||||||||| |||||||
Sbjct: 5960573 gcgctggccggtctccttca 5960592




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 327    ttctacggcgacctg 341
              |||||||||||||||
Sbjct: 110600 ttctacggcgacctg 110586




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 221    cgatctgccgctggc 235
              |||||||||||||||
Sbjct: 146593 cgatctgccgctggc 146607




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 229    cgctggccgaactga 243
              |||||||||||||||
Sbjct: 156683 cgctggccgaactga 156669




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 553    tgcttcattgctttc 567
              |||||||||||||||
Sbjct: 602825 tgcttcattgctttc 602811




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 161    gagcgagccggtggg 175
              |||||||||||||||
Sbjct: 639783 gagcgagccggtggg 639769




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 57     tacctcggcctcggc 71
              |||||||||||||||
Sbjct: 778212 tacctcggcctcggc 778226




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 118    tggccggtttccttc 132
              |||||||||||||||
Sbjct: 882178 tggccggtttccttc 882164




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 107     cctcgatgcgctggc 121
               |||||||||||||||
Sbjct: 1014023 cctcgatgcgctggc 1014009




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 367     tgccgcgcgccgata 381
               |||||||||||||||
Sbjct: 1207070 tgccgcgcgccgata 1207056




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 445     gttcgcccgccacccgctg 463
               ||||||| |||||||||||
Sbjct: 1397155 gttcgccggccacccgctg 1397173




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 328     tctacggcgacctgg 342
               |||||||||||||||
Sbjct: 1541892 tctacggcgacctgg 1541906




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 453     gccacccgctgggcg 467
               |||||||||||||||
Sbjct: 1667138 gccacccgctgggcg 1667152




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 183     agcgggccgttcttc 197
               |||||||||||||||
Sbjct: 1714894 agcgggccgttcttc 1714908




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 295     gcaagggactgccgctgga 313
               |||||| ||||||||||||
Sbjct: 1725247 gcaaggcactgccgctgga 1725265




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 109     tcgatgcgctggccg 123
               |||||||||||||||
Sbjct: 1807790 tcgatgcgctggccg 1807804




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 109     tcgatgcgctggccg 123
               |||||||||||||||
Sbjct: 1817100 tcgatgcgctggccg 1817114




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 450     cccgccacccgctgg 464
               |||||||||||||||
Sbjct: 1822600 cccgccacccgctgg 1822586




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 98      gcgtgccggcctcga 112
               |||||||||||||||
Sbjct: 2057520 gcgtgccggcctcga 2057506




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 364     tgctgccgcgcgccg 378
               |||||||||||||||
Sbjct: 2169668 tgctgccgcgcgccg 2169682




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 308     gctggatatcgacgtgctg 326
               ||||||| |||||||||||
Sbjct: 2447027 gctggatgtcgacgtgctg 2447009




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 106     gcctcgatgcgctgg 120
               |||||||||||||||
Sbjct: 2594133 gcctcgatgcgctgg 2594147




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 404     tctggcccttgtccg 418
               |||||||||||||||
Sbjct: 2797586 tctggcccttgtccg 2797600




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 196     tcaacctggtggtgt 210
               |||||||||||||||
Sbjct: 2981061 tcaacctggtggtgt 2981075




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 139     cgcgttgctcgccgg 153
               |||||||||||||||
Sbjct: 3050667 cgcgttgctcgccgg 3050653




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 362     ggtgctgccgcgcgc 376
               |||||||||||||||
Sbjct: 3124118 ggtgctgccgcgcgc 3124104




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 323     gctgttctacggcgacctg 341
               ||||||| |||||||||||
Sbjct: 3165520 gctgttcaacggcgacctg 3165502




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 599     gaggctcgtacccta 613
               |||||||||||||||
Sbjct: 3179272 gaggctcgtacccta 3179258




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 102     gccggcctcgatgcg 116
               |||||||||||||||
Sbjct: 3250131 gccggcctcgatgcg 3250117




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 142     gttgctcgccggtgt 156
               |||||||||||||||
Sbjct: 3435344 gttgctcgccggtgt 3435358




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 123     ggtttccttcatgac 137
               |||||||||||||||
Sbjct: 3694160 ggtttccttcatgac 3694146




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 328     tctacggcgacctgg 342
               |||||||||||||||
Sbjct: 3774020 tctacggcgacctgg 3774034




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 114     gcgctggccggtttc 128
               |||||||||||||||
Sbjct: 3904334 gcgctggccggtttc 3904348




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 111     gatgcgctggccggt 125
               |||||||||||||||
Sbjct: 4090628 gatgcgctggccggt 4090614




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 357     ggcctggtgctgccg 371
               |||||||||||||||
Sbjct: 4117727 ggcctggtgctgccg 4117741




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 445     gttcgcccgccacccgctg 463
               ||||||| |||||||||||
Sbjct: 4145784 gttcgccggccacccgctg 4145802




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 352     tcgatggcctggtgc 366
               |||||||||||||||
Sbjct: 4362778 tcgatggcctggtgc 4362792




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 225     ctgccgctggccgaa 239
               |||||||||||||||
Sbjct: 4514756 ctgccgctggccgaa 4514742




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 227     gccgctggccgaact 241
               |||||||||||||||
Sbjct: 4660472 gccgctggccgaact 4660458




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 445     gttcgcccgccacccgctg 463
               ||||||| |||||||||||
Sbjct: 4830993 gttcgccggccacccgctg 4831011




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 704     aagatgccgtccatt 718
               |||||||||||||||
Sbjct: 5046789 aagatgccgtccatt 5046803




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 293     gcgcaagggactgcc 307
               |||||||||||||||
Sbjct: 5118484 gcgcaagggactgcc 5118470




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 109     tcgatgcgctggccg 123
               |||||||||||||||
Sbjct: 5432917 tcgatgcgctggccg 5432903




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 624     gccagattatgcccc 638
               |||||||||||||||
Sbjct: 5453428 gccagattatgcccc 5453442




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 120     gccggtttccttcat 134
               |||||||||||||||
Sbjct: 5529947 gccggtttccttcat 5529933




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 254     caagcacatcgaggc 268
               |||||||||||||||
Sbjct: 5655745 caagcacatcgaggc 5655731




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 154     tgttcgagagcgagc 168
               |||||||||||||||
Sbjct: 5740752 tgttcgagagcgagc 5740738




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 106     gcctcgatgcgctgg 120
               |||||||||||||||
Sbjct: 5777415 gcctcgatgcgctgg 5777401




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 227     gccgctggccgaact 241
               |||||||||||||||
Sbjct: 6082746 gccgctggccgaact 6082732




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 104     cggcctcgatgcgct 118
               |||||||||||||||
Sbjct: 6113368 cggcctcgatgcgct 6113382




 Score = 30.2 bits (15), Expect = 4.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 358     gcctggtgctgccgc 372
               |||||||||||||||
Sbjct: 6197573 gcctggtgctgccgc 6197559




  Database: pa14
    Posted date:  Jan 15, 2004  3:01 PM
  Number of letters in database: 6,534,396
  Number of sequences in database:  1
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7307
Number of Sequences: 1
Number of extensions: 7307
Number of successful extensions: 94
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 92
length of query: 870
length of database: 6,534,396
effective HSP length: 16
effective length of query: 854
effective length of database: 6,534,380
effective search space: 5580360520
effective search space used: 5580360520
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)