BLASTN 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: pa14 
           1 sequences; 6,534,396 total letters



Query= 
         (891 letters)

Distribution of 115 Blast Hits on the Query Sequence 



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GCTS_68                                                           696   0.0   



>GCTS_68 
          Length = 6534396

 Score =  696 bits (351), Expect = 0.0
 Identities = 351/351 (100%)
 Strand = Plus / Minus

                                                                           
Query: 54      tacatgacccccatcatcgtcctcgggactttcggcatcctcgccgagaccacccaggga 113
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3429520 tacatgacccccatcatcgtcctcgggactttcggcatcctcgccgagaccacccaggga 3429461

                                                                           
Query: 114     cacgtccccgccgcctacatcgccgcttccctggcgatgctcttcaccgccctcagctac 173
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3429460 cacgtccccgccgcctacatcgccgcttccctggcgatgctcttcaccgccctcagctac 3429401

                                                                           
Query: 174     gggcgcatggccgcggccttccccgtggccggctcggcctatacctacgtgcgcaaggcc 233
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3429400 gggcgcatggccgcggccttccccgtggccggctcggcctatacctacgtgcgcaaggcc 3429341

                                                                           
Query: 234     atcgattcccggctcggcttcatcgccggctgggcggtgctgctcgactacctgttcctg 293
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3429340 atcgattcccggctcggcttcatcgccggctgggcggtgctgctcgactacctgttcctg 3429281

                                                                           
Query: 294     ccgatggcgatctggctgatcggcgccgcctacctgcactcggcctttcccgcggtaccc 353
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3429280 ccgatggcgatctggctgatcggcgccgcctacctgcactcggcctttcccgcggtaccc 3429221

                                                                  
Query: 354     aacgcggtctgggtgctggcgttcatcggcgtgaccacgacgatcaacatc 404
               |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3429220 aacgcggtctgggtgctggcgttcatcggcgtgaccacgacgatcaacatc 3429170






 Score = 81.8 bits (41), Expect = 1e-15
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                    
Query: 247     tcggcttcatcgccggctgggcggtgctgctcgactacctgttcctgccgatg 299
               |||||||| ||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 6178050 tcggcttcctcgccggctggtcgctgctgctcgactacctgttcctgccgatg 6177998






 Score = 65.9 bits (33), Expect = 8e-11
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                        
Query: 247     tcggcttcatcgccggctgggcggtgctgctcgactacctg 287
               ||||||||||||||||||||| | |||||||||||||||||
Sbjct: 5738937 tcggcttcatcgccggctgggtgctgctgctcgactacctg 5738977






 Score = 63.9 bits (32), Expect = 3e-10
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                               
Query: 144     ctggcgatgctcttcaccgccctcagctacgg 175
               ||||||||||||||||||||||||||||||||
Sbjct: 5738834 ctggcgatgctcttcaccgccctcagctacgg 5738865






 Score = 58.0 bits (29), Expect = 2e-08
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                    
Query: 247     tcggcttcatcgccggctgggcggtgctgctcgactacctgttcctgccgatg 299
               |||||||||| | ||||||| ||  |||||| |||||||||||||||||||||
Sbjct: 1552209 tcggcttcatggtcggctggtcgtcgctgctggactacctgttcctgccgatg 1552261






 Score = 38.2 bits (19), Expect = 0.019
 Identities = 61/75 (81%)
 Strand = Plus / Minus

                                                                           
Query: 246     ctcggcttcatcgccggctgggcggtgctgctcgactacctgttcctgccgatggcgatc 305
               ||||||||||| |  |||||||| |  |||||||| ||| | ||| | ||||||  ||||
Sbjct: 1762688 ctcggcttcatggtgggctgggccgccctgctcgattacttcttcatcccgatgctgatc 1762629

                              
Query: 306     tggctgatcggcgcc 320
               |||||| ||||||||
Sbjct: 1762628 tggctgctcggcgcc 1762614






 Score = 38.2 bits (19), Expect = 0.019
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 146     ggcgatgctcttcaccgcc 164
               |||||||||||||||||||
Sbjct: 6178151 ggcgatgctcttcaccgcc 6178133






 Score = 36.2 bits (18), Expect = 0.074
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                    
Query: 90     atcctcgccgagaccacccagg 111
              |||||||||||||||| |||||
Sbjct: 523666 atcctcgccgagaccatccagg 523645






 Score = 36.2 bits (18), Expect = 0.074
 Identities = 24/26 (92%)
 Strand = Plus / Plus

                                         
Query: 106     cccagggacacgtccccgccgcctac 131
               ||||||||||||| ||| ||||||||
Sbjct: 1552068 cccagggacacgtgcccaccgcctac 1552093






 Score = 36.2 bits (18), Expect = 0.074
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 87      ggcatcctcgccgagacc 104
               ||||||||||||||||||
Sbjct: 1882553 ggcatcctcgccgagacc 1882570






 Score = 36.2 bits (18), Expect = 0.074
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 367     tgctggcgttcatcggcg 384
               ||||||||||||||||||
Sbjct: 3004140 tgctggcgttcatcggcg 3004123






 Score = 36.2 bits (18), Expect = 0.074
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 357     gcggtctgggtgctggcg 374
               ||||||||||||||||||
Sbjct: 5955921 gcggtctgggtgctggcg 5955938






 Score = 34.2 bits (17), Expect = 0.29
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                               
Query: 316    gcgccgcctacctgcac 332
              |||||||||||||||||
Sbjct: 727676 gcgccgcctacctgcac 727660






 Score = 34.2 bits (17), Expect = 0.29
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 248     cggcttcatcgccggct 264
               |||||||||||||||||
Sbjct: 1062243 cggcttcatcgccggct 1062227






 Score = 34.2 bits (17), Expect = 0.29
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 257     cgccggctgggcggtgc 273
               |||||||||||||||||
Sbjct: 1654157 cgccggctgggcggtgc 1654173






 Score = 34.2 bits (17), Expect = 0.29
 Identities = 20/21 (95%)
 Strand = Plus / Minus

                                    
Query: 308     gctgatcggcgccgcctacct 328
               ||||||||||| |||||||||
Sbjct: 1726700 gctgatcggcggcgcctacct 1726680






 Score = 34.2 bits (17), Expect = 0.29
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 169     gctacgggcgcatggcc 185
               |||||||||||||||||
Sbjct: 1827181 gctacgggcgcatggcc 1827197






 Score = 34.2 bits (17), Expect = 0.29
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 313     tcggcgccgcctacctg 329
               |||||||||||||||||
Sbjct: 2768191 tcggcgccgcctacctg 2768207






 Score = 34.2 bits (17), Expect = 0.29
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 248     cggcttcatcgccggct 264
               |||||||||||||||||
Sbjct: 3385399 cggcttcatcgccggct 3385383






 Score = 34.2 bits (17), Expect = 0.29
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 313     tcggcgccgcctacctg 329
               |||||||||||||||||
Sbjct: 3410944 tcggcgccgcctacctg 3410960






 Score = 34.2 bits (17), Expect = 0.29
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 118     tccccgccgcctacatc 134
               |||||||||||||||||
Sbjct: 4013648 tccccgccgcctacatc 4013664






 Score = 34.2 bits (17), Expect = 0.29
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 285     ctgttcctgccgatggc 301
               |||||||||||||||||
Sbjct: 4924275 ctgttcctgccgatggc 4924259






 Score = 34.2 bits (17), Expect = 0.29
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 121     ccgccgcctacatcgcc 137
               |||||||||||||||||
Sbjct: 5392967 ccgccgcctacatcgcc 5392983






 Score = 34.2 bits (17), Expect = 0.29
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 253     tcatcgccggctgggcg 269
               |||||||||||||||||
Sbjct: 5621410 tcatcgccggctgggcg 5621394






 Score = 34.2 bits (17), Expect = 0.29
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 84      ttcggcatcctcgccga 100
               |||||||||||||||||
Sbjct: 5773573 ttcggcatcctcgccga 5773557






 Score = 34.2 bits (17), Expect = 0.29
 Identities = 23/25 (92%)
 Strand = Plus / Minus

                                        
Query: 257     cgccggctgggcggtgctgctcgac 281
               ||||||| || ||||||||||||||
Sbjct: 6184510 cgccggcgggccggtgctgctcgac 6184486






 Score = 34.2 bits (17), Expect = 0.29
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 358     cggtctgggtgctggcg 374
               |||||||||||||||||
Sbjct: 6323515 cggtctgggtgctggcg 6323531






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                             
Query: 284   cctgttcctgccgatg 299
             ||||||||||||||||
Sbjct: 99375 cctgttcctgccgatg 99360






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                              
Query: 149    gatgctcttcaccgcc 164
              ||||||||||||||||
Sbjct: 530916 gatgctcttcaccgcc 530931






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                              
Query: 292    tgccgatggcgatctg 307
              ||||||||||||||||
Sbjct: 942274 tgccgatggcgatctg 942259






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                  
Query: 194    ccccgtggccggctcggcct 213
              ||||||||||||| ||||||
Sbjct: 981472 ccccgtggccggcgcggcct 981491






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 296     gatggcgatctggctg 311
               ||||||||||||||||
Sbjct: 1087141 gatggcgatctggctg 1087126






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 290     cctgccgatggcgatc 305
               ||||||||||||||||
Sbjct: 1759263 cctgccgatggcgatc 1759248






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 85      tcggcatcctcgccga 100
               ||||||||||||||||
Sbjct: 1924319 tcggcatcctcgccga 1924334






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 269     ggtgctgctcgactac 284
               ||||||||||||||||
Sbjct: 2122655 ggtgctgctcgactac 2122640






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 22/24 (91%)
 Strand = Plus / Plus

                                       
Query: 308     gctgatcggcgccgcctacctgca 331
               |||||||| | |||||||||||||
Sbjct: 2905791 gctgatcgccaccgcctacctgca 2905814






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 368     gctggcgttcatcggc 383
               ||||||||||||||||
Sbjct: 3161447 gctggcgttcatcggc 3161432






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 257     cgccggctgggcggtg 272
               ||||||||||||||||
Sbjct: 3324564 cgccggctgggcggtg 3324579






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 308     gctgatcggcgccgcc 323
               ||||||||||||||||
Sbjct: 3414050 gctgatcggcgccgcc 3414065






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 359     ggtctgggtgctggcg 374
               ||||||||||||||||
Sbjct: 3731804 ggtctgggtgctggcg 3731789






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 276     ctcgactacctgttcc 291
               ||||||||||||||||
Sbjct: 3867342 ctcgactacctgttcc 3867357






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 314     cggcgccgcctacctg 329
               ||||||||||||||||
Sbjct: 4290194 cggcgccgcctacctg 4290209






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 313     tcggcgccgcctacct 328
               ||||||||||||||||
Sbjct: 4473707 tcggcgccgcctacct 4473692






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 359     ggtctgggtgctggcg 374
               ||||||||||||||||
Sbjct: 4752275 ggtctgggtgctggcg 4752260






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 86      cggcatcctcgccgag 101
               ||||||||||||||||
Sbjct: 4980296 cggcatcctcgccgag 4980311






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 179     catggccgcggccttc 194
               ||||||||||||||||
Sbjct: 5179354 catggccgcggccttc 5179339






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                   
Query: 275     gctcgactacctgttcctgc 294
               ||||||||||| ||||||||
Sbjct: 5352241 gctcgactacccgttcctgc 5352222






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 89      catcctcgccgagaccaccc 108
               |||||||||||||| |||||
Sbjct: 5460892 catcctcgccgagatcaccc 5460911






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 123     gccgcctacatcgccg 138
               ||||||||||||||||
Sbjct: 5812727 gccgcctacatcgccg 5812712






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 308     gctgatcggcgccgcc 323
               ||||||||||||||||
Sbjct: 6124334 gctgatcggcgccgcc 6124319






 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                   
Query: 201     gccggctcggcctataccta 220
               ||||||||||||||| ||||
Sbjct: 6178096 gccggctcggcctattccta 6178077






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                            
Query: 85    tcggcatcctcgccg 99
             |||||||||||||||
Sbjct: 13436 tcggcatcctcgccg 13450






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 85     tcggcatcctcgccg 99
              |||||||||||||||
Sbjct: 127970 tcggcatcctcgccg 127956






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 279    gactacctgttcctg 293
              |||||||||||||||
Sbjct: 388466 gactacctgttcctg 388480






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 86     cggcatcctcgccga 100
              |||||||||||||||
Sbjct: 432182 cggcatcctcgccga 432168






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                 
Query: 319    ccgcctacctgcactcggc 337
              |||| ||||||||||||||
Sbjct: 446761 ccgcgtacctgcactcggc 446779






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 263    ctgggcggtgctgct 277
              |||||||||||||||
Sbjct: 523201 ctgggcggtgctgct 523187






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 248    cggcttcatcgccgg 262
              |||||||||||||||
Sbjct: 577603 cggcttcatcgccgg 577589






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 313    tcggcgccgcctacc 327
              |||||||||||||||
Sbjct: 623679 tcggcgccgcctacc 623693






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                 
Query: 272    gctgctcgactacctgttc 290
              ||||||| |||||||||||
Sbjct: 673074 gctgctcaactacctgttc 673092






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 198    gtggccggctcggcc 212
              |||||||||||||||
Sbjct: 805999 gtggccggctcggcc 806013






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 301    cgatctggctgatcg 315
              |||||||||||||||
Sbjct: 993326 cgatctggctgatcg 993340






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 258    gccggctgggcggtg 272
              |||||||||||||||
Sbjct: 994938 gccggctgggcggtg 994924






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 261     ggctgggcggtgctgctcg 279
               ||||||||||| |||||||
Sbjct: 1079750 ggctgggcggtcctgctcg 1079732






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 86      cggcatcctcgccga 100
               |||||||||||||||
Sbjct: 1120935 cggcatcctcgccga 1120921






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 94      tcgccgagaccaccc 108
               |||||||||||||||
Sbjct: 1195213 tcgccgagaccaccc 1195227






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 288     ttcctgccgatggcg 302
               |||||||||||||||
Sbjct: 1304155 ttcctgccgatggcg 1304169






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 276     ctcgactacctgttc 290
               |||||||||||||||
Sbjct: 1314716 ctcgactacctgttc 1314702






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 217     cctacgtgcgcaagg 231
               |||||||||||||||
Sbjct: 1417214 cctacgtgcgcaagg 1417200






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 371     ggcgttcatcggcgt 385
               |||||||||||||||
Sbjct: 1865577 ggcgttcatcggcgt 1865591






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 133     tcgccgcttccctgg 147
               |||||||||||||||
Sbjct: 1989623 tcgccgcttccctgg 1989609






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 306     tggctgatcggcgcc 320
               |||||||||||||||
Sbjct: 2369507 tggctgatcggcgcc 2369521






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 317     cgccgcctacctgca 331
               |||||||||||||||
Sbjct: 2371630 cgccgcctacctgca 2371616






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 314     cggcgccgcctacctgcac 332
               |||||||||||||| ||||
Sbjct: 2596954 cggcgccgcctaccagcac 2596936






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 125     cgcctacatcgccgc 139
               |||||||||||||||
Sbjct: 2600161 cgcctacatcgccgc 2600175






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 315     ggcgccgcctacctg 329
               |||||||||||||||
Sbjct: 2669957 ggcgccgcctacctg 2669943






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 333     tcggcctttcccgcg 347
               |||||||||||||||
Sbjct: 2769811 tcggcctttcccgcg 2769797






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 85      tcggcatcctcgccg 99
               |||||||||||||||
Sbjct: 2866254 tcggcatcctcgccg 2866240






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 288     ttcctgccgatggcg 302
               |||||||||||||||
Sbjct: 2916574 ttcctgccgatggcg 2916560






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 125     cgcctacatcgccgc 139
               |||||||||||||||
Sbjct: 3082890 cgcctacatcgccgc 3082876






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 86      cggcatcctcgccga 100
               |||||||||||||||
Sbjct: 3094983 cggcatcctcgccga 3094969






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 317     cgccgcctacctgca 331
               |||||||||||||||
Sbjct: 3103722 cgccgcctacctgca 3103708






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 317     cgccgcctacctgca 331
               |||||||||||||||
Sbjct: 3105645 cgccgcctacctgca 3105631






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 144     ctggcgatgctcttc 158
               |||||||||||||||
Sbjct: 3220033 ctggcgatgctcttc 3220019






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 258     gccggctgggcggtgctgc 276
               |||||||||||| ||||||
Sbjct: 3262327 gccggctgggcgctgctgc 3262309






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 86      cggcatcctcgccga 100
               |||||||||||||||
Sbjct: 3312903 cggcatcctcgccga 3312917






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 314     cggcgccgcctacct 328
               |||||||||||||||
Sbjct: 3315812 cggcgccgcctacct 3315826






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 220     acgtgcgcaaggcca 234
               |||||||||||||||
Sbjct: 3591017 acgtgcgcaaggcca 3591003






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 245     gctcggcttcatcgccggc 263
               ||||||||||| |||||||
Sbjct: 3893161 gctcggcttcaccgccggc 3893179






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 257     cgccggctgggcggt 271
               |||||||||||||||
Sbjct: 3919412 cgccggctgggcggt 3919426






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 124     ccgcctacatcgccg 138
               |||||||||||||||
Sbjct: 3922584 ccgcctacatcgccg 3922598






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 308     gctgatcggcgccgcctac 326
               |||||| ||||||||||||
Sbjct: 4152870 gctgatgggcgccgcctac 4152852






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 309     ctgatcggcgccgcc 323
               |||||||||||||||
Sbjct: 4350907 ctgatcggcgccgcc 4350921






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 199     tggccggctcggcct 213
               |||||||||||||||
Sbjct: 4538477 tggccggctcggcct 4538463






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 261     ggctgggcggtgctg 275
               |||||||||||||||
Sbjct: 4647955 ggctgggcggtgctg 4647941






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 85      tcggcatcctcgccg 99
               |||||||||||||||
Sbjct: 4648221 tcggcatcctcgccg 4648207






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 310     tgatcggcgccgcct 324
               |||||||||||||||
Sbjct: 4794314 tgatcggcgccgcct 4794328






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 292     tgccgatggcgatct 306
               |||||||||||||||
Sbjct: 4924041 tgccgatggcgatct 4924055






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 223     tgcgcaaggccatcg 237
               |||||||||||||||
Sbjct: 5000682 tgcgcaaggccatcg 5000696






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 142     ccctggcgatgctct 156
               |||||||||||||||
Sbjct: 5013951 ccctggcgatgctct 5013937






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 306     tggctgatcggcgcc 320
               |||||||||||||||
Sbjct: 5037264 tggctgatcggcgcc 5037250






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 247     tcggcttcatcgccg 261
               |||||||||||||||
Sbjct: 5128857 tcggcttcatcgccg 5128843






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 313     tcggcgccgcctacctgca 331
               ||||||||||| |||||||
Sbjct: 5175017 tcggcgccgccaacctgca 5175035






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 21/23 (91%)
 Strand = Plus / Plus

                                      
Query: 247     tcggcttcatcgccggctgggcg 269
               |||||| | ||||||||||||||
Sbjct: 5244933 tcggctgcgtcgccggctgggcg 5244955






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 21/23 (91%)
 Strand = Plus / Minus

                                      
Query: 284     cctgttcctgccgatggcgatct 306
               ||||||| ||| |||||||||||
Sbjct: 5275020 cctgttcgtgctgatggcgatct 5274998






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 86      cggcatcctcgccga 100
               |||||||||||||||
Sbjct: 5469208 cggcatcctcgccga 5469194






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 227     caaggccatcgattc 241
               |||||||||||||||
Sbjct: 5474075 caaggccatcgattc 5474089






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 85      tcggcatcctcgccg 99
               |||||||||||||||
Sbjct: 5490723 tcggcatcctcgccg 5490737






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 309     ctgatcggcgccgcc 323
               |||||||||||||||
Sbjct: 5913826 ctgatcggcgccgcc 5913812






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 146     ggcgatgctcttcaccgcc 164
               ||||||||||||| |||||
Sbjct: 6030328 ggcgatgctcttcgccgcc 6030310






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 376     tcatcggcgtgacca 390
               |||||||||||||||
Sbjct: 6035391 tcatcggcgtgacca 6035405






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 309     ctgatcggcgccgcc 323
               |||||||||||||||
Sbjct: 6171196 ctgatcggcgccgcc 6171182






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 224     gcgcaaggccatcga 238
               |||||||||||||||
Sbjct: 6276508 gcgcaaggccatcga 6276522






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 288     ttcctgccgatggcg 302
               |||||||||||||||
Sbjct: 6290640 ttcctgccgatggcg 6290654






 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 223     tgcgcaaggccatcg 237
               |||||||||||||||
Sbjct: 6472387 tgcgcaaggccatcg 6472401






  Database: pa14
    Posted date:  Jan 15, 2004  3:01 PM
  Number of letters in database: 6,534,396
  Number of sequences in database:  1
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6137
Number of Sequences: 1
Number of extensions: 6137
Number of successful extensions: 116
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 116
length of query: 891
length of database: 6,534,396
effective HSP length: 16
effective length of query: 875
effective length of database: 6,534,380
effective search space: 5717582500
effective search space used: 5717582500
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)