BLAST Search Results

BLASTN 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: pa14 
           1 sequences; 6,534,396 total letters



Query= 
         (805 letters)

Distribution of 132 Blast Hits on the Query Sequence



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GCTS_68                                                          1334   0.0   

>GCTS_68 
          Length = 6534396

 Score = 1334 bits (673), Expect = 0.0
 Identities = 729/745 (97%), Gaps = 2/745 (0%)
 Strand = Plus / Plus

                                                                           
Query: 59      tacagccagagcgactaccgcacgcgcaacgaggccagcggcttccccttcaagctcgat 118
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5843337 tacagccagagcgactaccgcacgcgcaacgaggccagcggcttccccttcaagctcgat 5843396

                                                                           
Query: 119     ggcgacagccgcagccaccagttccgcgccgaacgcgtgctgcaccgcgacggtgtgagc 178
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5843397 ggcgacagccgcagccaccagttccgcgccgaacgcgtgctgcaccgcgacggtgtgagc 5843456

                                                                           
Query: 179     aagaccgccatgagcctggggctcagccaccagcgcaccaacaactatgtcgaagacacc 238
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5843457 aagaccgccatgagcctggggctcagccaccagcgcaccaacaactatgtcgaagacacc 5843516

                                                                           
Query: 239     cgcctggaagaccagagcacgcggatcaccgagacccagctcggcttcaaccatggccgg 298
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5843517 cgcctggaagaccagagcacgcggatcaccgagacccagctcggcttcaaccatggccgg 5843576

                                                                           
Query: 299     cggatcggcagtggcttcgtcaacctcgacctcggctggcagcagggcatcggcgccctt 358
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5843577 cggatcggcagtggcttcgtcaacctcgacctcggctggcagcagggcatcggcgccctt 5843636

                                                                           
Query: 359     ggcgcgcagggtcgcggccacccgcaggcgggcgatccgaatgcgcgctacgacaagtac 418
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5843637 ggcgcgcagggtcgcggccacccgcaggcgggcgatccgaatgcgcgctacgacaagtac 5843696

                                                                           
Query: 419     agcctgaccctcagctacctgcagccgttccagctatggggcgagcgcttctaattcgac 478
               |||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||
Sbjct: 5843697 agcctgaccctcagctacctgcagccgttccagctatggggcgagcgcttcagcttcgac 5843756

                                                                           
Query: 479     agcctggccaccgggcagaggagcgaggacgtgctgttcagcccgcagcgcatcagcctc 538
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5843757 agcctggccaccgggcagaggagcgaggacgtgctgttcagcccgcagcgcatcagcctc 5843816

                                                                           
Query: 539     ggcggcaacagctcggtgcgcggcttcaaggaccagaccctgaccggcgacagcggcggc 598
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5843817 ggcggcaacagctcggtgcgcggcttcaaggaccagaccctgaccggcgacagcggcggc 5843876

                                                                           
Query: 599     tactggcgcaaccagttgcgctggcggcgtgcggtggaatgggcgccgctgcggccctgg 658
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5843877 tactggcgcaaccagttgcgctggcggcgtgcggtggaatgggcgccgctgcggccctgg 5843936

                                                                           
Query: 659     ctgcaggaatacggcgtggccttcgcctacgacttcggcgtgatccgccccgaccgctac 718
               ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 5843937 ctgcaggaatacggcgtggccttcgcctacgacgtcggcgtgatccgccacgaccgctac 5843996

                                                                           
Query: 719     aacgactgcgccagggggcgcatgaacgggcaacgccatctaaactggaagcccgcggtc 778
               |||||| ||||||| |||||||||| | ||||||||||||  ||||||| |||||||| |
Sbjct: 5843997 aacgacggcgccagcgggcgcatgagc-ggcaacgccatc-gaactggatgcccgcggcc 5844054

                                        
Query: 779     cctatttcccccccagcgtcggctt 803
                ||||||| || |||||||||||||
Sbjct: 5844055 gctatttcgccgccagcgtcggctt 5844079




 Score = 1302 bits (657), Expect = 0.0
 Identities = 725/745 (97%), Gaps = 2/745 (0%)
 Strand = Plus / Minus

                                                                           
Query: 59      tacagccagagcgactaccgcacgcgcaacgaggccagcggcttccccttcaagctcgat 118
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2106290 tacagccagagcgactaccgcacgcgcaacgaggccagcggcttccccttcaagctcgat 2106231

                                                                           
Query: 119     ggcgacagccgcagccaccagttccgcgccgaacgcgtgctgcaccgcgacggtgtgagc 178
               ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2106230 ggcgacagccgcagccaccagttccgcgccgaacgcgtgctgcaccgcgacggcgtgagc 2106171

                                                                           
Query: 179     aagaccgccatgagcctggggctcagccaccagcgcaccaacaactatgtcgaagacacc 238
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2106170 aagaccgccatgagcctggggctcagccaccagcgcaccaacaactatgtcgaagacacc 2106111

                                                                           
Query: 239     cgcctggaagaccagagcacgcggatcaccgagacccagctcggcttcaaccatggccgg 298
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2106110 cgcctggaagaccagagcacgcggatcaccgagacccagctcggcttcaaccatggccgg 2106051

                                                                           
Query: 299     cggatcggcagtggcttcgtcaacctcgacctcggctggcagcagggcatcggcgccctt 358
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2106050 cggatcggcagtggcttcgtcaacctcgacctcggctggcagcagggcatcggcgccctt 2105991

                                                                           
Query: 359     ggcgcgcagggtcgcggccacccgcaggcgggcgatccgaatgcgcgctacgacaagtac 418
               ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2105990 ggcgcgcagggtcgcggccacccgcaggcgggcgatccgcatgcgcgctacgacaagtac 2105931

                                                                           
Query: 419     agcctgaccctcagctacctgcagccgttccagctatggggcgagcgcttctaattcgac 478
               |||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||
Sbjct: 2105930 agcctgaccctcagctacctgcagccgttccagctatggggcgagcgcttcagcttcgac 2105871

                                                                           
Query: 479     agcctggccaccgggcagaggagcgaggacgtgctgttcagcccgcagcgcatcagcctc 538
               ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 2105870 agcctggccaccgggcaaaggagtgaggacgtgctgttcagcccgcagcgcatcagcctc 2105811

                                                                           
Query: 539     ggcggcaacagctcggtgcgcggcttcaaggaccagaccctgaccggcgacagcggcggc 598
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2105810 ggcggcaacagctcggtgcgcggcttcaaggaccagaccctgaccggcgacagcggcggc 2105751

                                                                           
Query: 599     tactggcgcaaccagttgcgctggcggcgtgcggtggaatgggcgccgctgcggccctgg 658
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2105750 tactggcgcaaccagttgcgctggcggcgtgcggtggaatgggcgccgctgcggccctgg 2105691

                                                                           
Query: 659     ctgcaggaatacggcgtggccttcgcctacgacttcggcgtgatccgccccgaccgctac 718
               ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 2105690 ctgcaggaatacggcgtggccttcgcctacgacgtcggcgtgatccgccacgaccgctac 2105631

                                                                           
Query: 719     aacgactgcgccagggggcgcatgaacgggcaacgccatctaaactggaagcccgcggtc 778
               |||||| ||||||| |||||||||| | ||||||||||||  ||||||| |||||||| |
Sbjct: 2105630 aacgacggcgccagcgggcgcatgagc-ggcaacgccatc-gaactggatgcccgcggcc 2105573

                                        
Query: 779     cctatttcccccccagcgtcggctt 803
                ||||||| || |||||||||||||
Sbjct: 2105572 gctatttcgccgccagcgtcggctt 2105548




 Score = 38.2 bits (19), Expect = 0.017
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 235     cacccgcctggaagaccag 253
               |||||||||||||||||||
Sbjct: 4912661 cacccgcctggaagaccag 4912679




 Score = 36.2 bits (18), Expect = 0.066
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 581   accggcgacagcggcggc 598
             ||||||||||||||||||
Sbjct: 17629 accggcgacagcggcggc 17646




 Score = 36.2 bits (18), Expect = 0.066
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 668    tacggcgtggccttcgcc 685
              ||||||||||||||||||
Sbjct: 690844 tacggcgtggccttcgcc 690827




 Score = 36.2 bits (18), Expect = 0.066
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 337     gcagcagggcatcggcgc 354
               ||||||||||||||||||
Sbjct: 2687282 gcagcagggcatcggcgc 2687299




 Score = 36.2 bits (18), Expect = 0.066
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 338     cagcagggcatcggcgcc 355
               ||||||||||||||||||
Sbjct: 3005719 cagcagggcatcggcgcc 3005736




 Score = 36.2 bits (18), Expect = 0.066
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                     
Query: 550     ctcggtgcgcggcttcaaggac 571
               ||||||||| ||||||||||||
Sbjct: 3481430 ctcggtgcgaggcttcaaggac 3481409




 Score = 36.2 bits (18), Expect = 0.066
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 412     caagtacagcctgaccct 429
               ||||||||||||||||||
Sbjct: 5323245 caagtacagcctgaccct 5323228




 Score = 34.2 bits (17), Expect = 0.26
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                               
Query: 475    cgacagcctggccaccg 491
              |||||||||||||||||
Sbjct: 796149 cgacagcctggccaccg 796165




 Score = 34.2 bits (17), Expect = 0.26
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                               
Query: 577    cctgaccggcgacagcg 593
              |||||||||||||||||
Sbjct: 818617 cctgaccggcgacagcg 818633




 Score = 34.2 bits (17), Expect = 0.26
 Identities = 23/25 (92%)
 Strand = Plus / Plus

                                        
Query: 689     gacttcggcgtgatccgccccgacc 713
               |||||| ||||||||||| ||||||
Sbjct: 1190740 gacttccgcgtgatccgcgccgacc 1190764




 Score = 34.2 bits (17), Expect = 0.26
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 360     gcgcgcagggtcgcggc 376
               |||||||||||||||||
Sbjct: 1342744 gcgcgcagggtcgcggc 1342760




 Score = 34.2 bits (17), Expect = 0.26
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 607     caaccagttgcgctggc 623
               |||||||||||||||||
Sbjct: 1346401 caaccagttgcgctggc 1346417




 Score = 34.2 bits (17), Expect = 0.26
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 341     cagggcatcggcgccct 357
               |||||||||||||||||
Sbjct: 1534578 cagggcatcggcgccct 1534562




 Score = 34.2 bits (17), Expect = 0.26
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 595     cggctactggcgcaacc 611
               |||||||||||||||||
Sbjct: 2040594 cggctactggcgcaacc 2040578




 Score = 34.2 bits (17), Expect = 0.26
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 353     gcccttggcgcgcaggg 369
               |||||||||||||||||
Sbjct: 5196554 gcccttggcgcgcaggg 5196538




 Score = 34.2 bits (17), Expect = 0.26
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 252     agagcacgcggatcacc 268
               |||||||||||||||||
Sbjct: 5383375 agagcacgcggatcacc 5383359




 Score = 34.2 bits (17), Expect = 0.26
 Identities = 20/21 (95%)
 Strand = Plus / Minus

                                    
Query: 348     tcggcgcccttggcgcgcagg 368
               ||||||||| |||||||||||
Sbjct: 6257054 tcggcgcccatggcgcgcagg 6257034




 Score = 32.2 bits (16), Expect = 1.0
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                  
Query: 348    tcggcgcccttggcgcgcag 367
              |||||||| |||||||||||
Sbjct: 186212 tcggcgccgttggcgcgcag 186231




 Score = 32.2 bits (16), Expect = 1.0
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                  
Query: 357    ttggcgcgcagggtcgcggc 376
              ||||||||||||| ||||||
Sbjct: 465952 ttggcgcgcagggccgcggc 465971




 Score = 32.2 bits (16), Expect = 1.0
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                              
Query: 623    cggcgtgcggtggaat 638
              ||||||||||||||||
Sbjct: 524461 cggcgtgcggtggaat 524446




 Score = 32.2 bits (16), Expect = 1.0
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 531     tcagcctcggcggcaa 546
               ||||||||||||||||
Sbjct: 1284367 tcagcctcggcggcaa 1284352




 Score = 32.2 bits (16), Expect = 1.0
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                   
Query: 577     cctgaccggcgacagcggcg 596
               |||| |||||||||||||||
Sbjct: 1328916 cctgcccggcgacagcggcg 1328897




 Score = 32.2 bits (16), Expect = 1.0
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 319     caacctcgacctcggc 334
               ||||||||||||||||
Sbjct: 1486797 caacctcgacctcggc 1486782




 Score = 32.2 bits (16), Expect = 1.0
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 520     cccgcagcgcatcagc 535
               ||||||||||||||||
Sbjct: 1670257 cccgcagcgcatcagc 1670272




 Score = 32.2 bits (16), Expect = 1.0
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 529     catcagcctcggcggc 544
               ||||||||||||||||
Sbjct: 2096987 catcagcctcggcggc 2096972




 Score = 32.2 bits (16), Expect = 1.0
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 271     gacccagctcggcttc 286
               ||||||||||||||||
Sbjct: 2221179 gacccagctcggcttc 2221164




 Score = 32.2 bits (16), Expect = 1.0
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 338     cagcagggcatcggcg 353
               ||||||||||||||||
Sbjct: 2361205 cagcagggcatcggcg 2361190




 Score = 32.2 bits (16), Expect = 1.0
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 191     agcctggggctcagcc 206
               ||||||||||||||||
Sbjct: 2528283 agcctggggctcagcc 2528268




 Score = 32.2 bits (16), Expect = 1.0
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 414     agtacagcctgaccct 429
               ||||||||||||||||
Sbjct: 2707009 agtacagcctgaccct 2706994




 Score = 32.2 bits (16), Expect = 1.0
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 790     cccagcgtcggctttc 805
               ||||||||||||||||
Sbjct: 2823741 cccagcgtcggctttc 2823726




 Score = 32.2 bits (16), Expect = 1.0
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 643     gccgctgcggccctgg 658
               ||||||||||||||||
Sbjct: 3159512 gccgctgcggccctgg 3159497




 Score = 32.2 bits (16), Expect = 1.0
 Identities = 22/24 (91%)
 Strand = Plus / Plus

                                       
Query: 643     gccgctgcggccctggctgcagga 666
               ||||| ||||||||||||| ||||
Sbjct: 4005872 gccgcagcggccctggctggagga 4005895




 Score = 32.2 bits (16), Expect = 1.0
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 554     gtgcgcggcttcaagg 569
               ||||||||||||||||
Sbjct: 4153553 gtgcgcggcttcaagg 4153538




 Score = 32.2 bits (16), Expect = 1.0
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 438     tgcagccgttccagct 453
               ||||||||||||||||
Sbjct: 4153588 tgcagccgttccagct 4153573




 Score = 32.2 bits (16), Expect = 1.0
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                   
Query: 531     tcagcctcggcggcaacagc 550
               |||||||||||||| |||||
Sbjct: 4164094 tcagcctcggcggcgacagc 4164075




 Score = 32.2 bits (16), Expect = 1.0
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 142     ccgcgccgaacgcgtgctgc 161
               |||||||||||||| |||||
Sbjct: 4695054 ccgcgccgaacgcgagctgc 4695073




 Score = 32.2 bits (16), Expect = 1.0
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 688     cgacttcggcgtgatc 703
               ||||||||||||||||
Sbjct: 4698413 cgacttcggcgtgatc 4698398




 Score = 32.2 bits (16), Expect = 1.0
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 271     gacccagctcggcttc 286
               ||||||||||||||||
Sbjct: 4790081 gacccagctcggcttc 4790096




 Score = 32.2 bits (16), Expect = 1.0
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                   
Query: 331     cggctggcagcagggcatcg 350
               |||| |||||||||||||||
Sbjct: 5228616 cggccggcagcagggcatcg 5228597




 Score = 32.2 bits (16), Expect = 1.0
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 334     ctggcagcagggcatc 349
               ||||||||||||||||
Sbjct: 5331875 ctggcagcagggcatc 5331890




 Score = 32.2 bits (16), Expect = 1.0
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 542     ggcaacagctcggtgc 557
               ||||||||||||||||
Sbjct: 5373518 ggcaacagctcggtgc 5373503




 Score = 32.2 bits (16), Expect = 1.0
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                   
Query: 684     cctacgacttcggcgtgatc 703
               ||||||| ||||||||||||
Sbjct: 5622102 cctacgagttcggcgtgatc 5622083




 Score = 32.2 bits (16), Expect = 1.0
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 691     cttcggcgtgatccgc 706
               ||||||||||||||||
Sbjct: 5651280 cttcggcgtgatccgc 5651265




 Score = 32.2 bits (16), Expect = 1.0
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 529     catcagcctcggcggc 544
               ||||||||||||||||
Sbjct: 5848251 catcagcctcggcggc 5848266




 Score = 32.2 bits (16), Expect = 1.0
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 525     agcgcatcagcctcggcggc 544
               |||||||| |||||||||||
Sbjct: 5954678 agcgcatccgcctcggcggc 5954697




 Score = 32.2 bits (16), Expect = 1.0
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 374     ggccacccgcaggcgg 389
               ||||||||||||||||
Sbjct: 6167190 ggccacccgcaggcgg 6167205




 Score = 32.2 bits (16), Expect = 1.0
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 553     ggtgcgcggcttcaag 568
               ||||||||||||||||
Sbjct: 6345988 ggtgcgcggcttcaag 6345973




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                            
Query: 591   gcggcggctactggc 605
             |||||||||||||||
Sbjct: 99517 gcggcggctactggc 99503




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 348    tcggcgcccttggcg 362
              |||||||||||||||
Sbjct: 115769 tcggcgcccttggcg 115755




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                 
Query: 601    ctggcgcaaccagttgcgc 619
              |||||||||||||| ||||
Sbjct: 176271 ctggcgcaaccagtcgcgc 176253




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 618    gctggcggcgtgcgg 632
              |||||||||||||||
Sbjct: 180497 gctggcggcgtgcgg 180511




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 364    gcagggtcgcggcca 378
              |||||||||||||||
Sbjct: 185290 gcagggtcgcggcca 185304




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 569    gaccagaccctgacc 583
              |||||||||||||||
Sbjct: 195784 gaccagaccctgacc 195798




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 746    gggcaacgccatcta 760
              |||||||||||||||
Sbjct: 256105 gggcaacgccatcta 256119




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 576    ccctgaccggcgaca 590
              |||||||||||||||
Sbjct: 307238 ccctgaccggcgaca 307224




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 478    cagcctggccaccgg 492
              |||||||||||||||
Sbjct: 308638 cagcctggccaccgg 308624




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 199    gctcagccaccagcg 213
              |||||||||||||||
Sbjct: 333209 gctcagccaccagcg 333195




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 439    gcagccgttccagct 453
              |||||||||||||||
Sbjct: 440834 gcagccgttccagct 440820




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 673    cgtggccttcgccta 687
              |||||||||||||||
Sbjct: 516193 cgtggccttcgccta 516179




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 348    tcggcgcccttggcg 362
              |||||||||||||||
Sbjct: 996581 tcggcgcccttggcg 996567




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 156     tgctgcaccgcgacg 170
               |||||||||||||||
Sbjct: 1017815 tgctgcaccgcgacg 1017801




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 582     ccggcgacagcggcg 596
               |||||||||||||||
Sbjct: 1251425 ccggcgacagcggcg 1251411




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 583     cggcgacagcggcgg 597
               |||||||||||||||
Sbjct: 1267674 cggcgacagcggcgg 1267688




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 169     cggtgtgagcaagaccgcc 187
               ||||||| |||||||||||
Sbjct: 1347677 cggtgtgcgcaagaccgcc 1347695




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 670     cggcgtggccttcgc 684
               |||||||||||||||
Sbjct: 1456478 cggcgtggccttcgc 1456464




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 145     cgccgaacgcgtgctgcac 163
               |||||| ||||||||||||
Sbjct: 1542034 cgccgaccgcgtgctgcac 1542052




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 175     gagcaagaccgccat 189
               |||||||||||||||
Sbjct: 1642339 gagcaagaccgccat 1642325




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 457     gggcgagcgcttcta 471
               |||||||||||||||
Sbjct: 1642621 gggcgagcgcttcta 1642607




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 274     ccagctcggcttcaaccat 292
               |||||||||||||| ||||
Sbjct: 1682781 ccagctcggcttcacccat 1682799




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 511     gctgttcagcccgcagcgc 529
               |||||||||||||| ||||
Sbjct: 1842128 gctgttcagcccgccgcgc 1842146




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 640     ggcgccgctgcggcc 654
               |||||||||||||||
Sbjct: 1906288 ggcgccgctgcggcc 1906274




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 597     gctactggcgcaacc 611
               |||||||||||||||
Sbjct: 1911776 gctactggcgcaacc 1911762




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 651     ggccctggctgcagg 665
               |||||||||||||||
Sbjct: 2008727 ggccctggctgcagg 2008713




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 311     ggcttcgtcaacctc 325
               |||||||||||||||
Sbjct: 2304526 ggcttcgtcaacctc 2304512




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 364     gcagggtcgcggcca 378
               |||||||||||||||
Sbjct: 2311505 gcagggtcgcggcca 2311519




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 566     aaggaccagaccctgaccg 584
               |||| ||||||||||||||
Sbjct: 2328689 aaggcccagaccctgaccg 2328671




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 474     tcgacagcctggcca 488
               |||||||||||||||
Sbjct: 2344915 tcgacagcctggcca 2344929




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 647     ctgcggccctggctg 661
               |||||||||||||||
Sbjct: 2409558 ctgcggccctggctg 2409544




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 341     cagggcatcggcgcc 355
               |||||||||||||||
Sbjct: 2435580 cagggcatcggcgcc 2435594




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 21/23 (91%)
 Strand = Plus / Plus

                                      
Query: 475     cgacagcctggccaccgggcaga 497
               |||| |||||| |||||||||||
Sbjct: 2446300 cgaccgcctggtcaccgggcaga 2446322




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 681     tcgcctacgacttcg 695
               |||||||||||||||
Sbjct: 2520778 tcgcctacgacttcg 2520792




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 761     aactggaagcccgcg 775
               |||||||||||||||
Sbjct: 2536388 aactggaagcccgcg 2536402




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 568     ggaccagaccctgaccggc 586
               ||||||||||||| |||||
Sbjct: 2546411 ggaccagaccctggccggc 2546393




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 353     gcccttggcgcgcag 367
               |||||||||||||||
Sbjct: 2755984 gcccttggcgcgcag 2755998




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 76      ccgcacgcgcaacga 90
               |||||||||||||||
Sbjct: 2765487 ccgcacgcgcaacga 2765473




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 136     ccagttccgcgccga 150
               |||||||||||||||
Sbjct: 2784456 ccagttccgcgccga 2784470




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 651     ggccctggctgcagg 665
               |||||||||||||||
Sbjct: 2827443 ggccctggctgcagg 2827457




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 373     cggccacccgcaggc 387
               |||||||||||||||
Sbjct: 2833484 cggccacccgcaggc 2833498




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 530     atcagcctcggcggc 544
               |||||||||||||||
Sbjct: 2854438 atcagcctcggcggc 2854424




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 575     accctgaccggcgac 589
               |||||||||||||||
Sbjct: 2931702 accctgaccggcgac 2931688




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 670     cggcgtggccttcgc 684
               |||||||||||||||
Sbjct: 3134535 cggcgtggccttcgc 3134549




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 341     cagggcatcggcgcc 355
               |||||||||||||||
Sbjct: 3383822 cagggcatcggcgcc 3383836




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 374     ggccacccgcaggcg 388
               |||||||||||||||
Sbjct: 3768910 ggccacccgcaggcg 3768924




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 140     ttccgcgccgaacgc 154
               |||||||||||||||
Sbjct: 3776892 ttccgcgccgaacgc 3776906




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 233     gacacccgcctggaa 247
               |||||||||||||||
Sbjct: 3802702 gacacccgcctggaa 3802716




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 374     ggccacccgcaggcg 388
               |||||||||||||||
Sbjct: 3806307 ggccacccgcaggcg 3806321




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 647     ctgcggccctggctg 661
               |||||||||||||||
Sbjct: 3851861 ctgcggccctggctg 3851847




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 639     gggcgccgctgcggc 653
               |||||||||||||||
Sbjct: 3927857 gggcgccgctgcggc 3927871




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 734     gggcgcatgaacggg 748
               |||||||||||||||
Sbjct: 3968740 gggcgcatgaacggg 3968726




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 320     aacctcgacctcggc 334
               |||||||||||||||
Sbjct: 3977647 aacctcgacctcggc 3977633




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 373     cggccacccgcaggc 387
               |||||||||||||||
Sbjct: 4015033 cggccacccgcaggc 4015019




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 84      gcaacgaggccagcg 98
               |||||||||||||||
Sbjct: 4027306 gcaacgaggccagcg 4027320




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 274     ccagctcggcttcaa 288
               |||||||||||||||
Sbjct: 4034628 ccagctcggcttcaa 4034614




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 718     caacgactgcgccag 732
               |||||||||||||||
Sbjct: 4093123 caacgactgcgccag 4093137




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 293     ggccggcggatcggc 307
               |||||||||||||||
Sbjct: 4132346 ggccggcggatcggc 4132360




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 601     ctggcgcaaccagttgcgc 619
               |||||||||||||| ||||
Sbjct: 4160776 ctggcgcaaccagtggcgc 4160794




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 24/27 (88%)
 Strand = Plus / Minus

                                          
Query: 671     ggcgtggccttcgcctacgacttcggc 697
               ||||| |||||| || |||||||||||
Sbjct: 4185149 ggcgtagccttctccaacgacttcggc 4185123




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 374     ggccacccgcaggcg 388
               |||||||||||||||
Sbjct: 4411119 ggccacccgcaggcg 4411133




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 364     gcagggtcgcggcca 378
               |||||||||||||||
Sbjct: 4412641 gcagggtcgcggcca 4412655




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 506     gacgtgctgttcagc 520
               |||||||||||||||
Sbjct: 4460797 gacgtgctgttcagc 4460811




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 583     cggcgacagcggcggctac 601
               ||||||||||| |||||||
Sbjct: 4581455 cggcgacagcgccggctac 4581473




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 610     ccagttgcgctggcg 624
               |||||||||||||||
Sbjct: 4644507 ccagttgcgctggcg 4644521




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 132     gccaccagttccgcg 146
               |||||||||||||||
Sbjct: 4731372 gccaccagttccgcg 4731358




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 596     ggctactggcgcaac 610
               |||||||||||||||
Sbjct: 4747789 ggctactggcgcaac 4747775




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 353     gcccttggcgcgcag 367
               |||||||||||||||
Sbjct: 4850641 gcccttggcgcgcag 4850627




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 380     ccgcaggcgggcgat 394
               |||||||||||||||
Sbjct: 5025711 ccgcaggcgggcgat 5025697




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 401     gcgcgctacgacaag 415
               |||||||||||||||
Sbjct: 5041102 gcgcgctacgacaag 5041088




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 159     tgcaccgcgacggtg 173
               |||||||||||||||
Sbjct: 5063639 tgcaccgcgacggtg 5063653




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 504     aggacgtgctgttca 518
               |||||||||||||||
Sbjct: 5103753 aggacgtgctgttca 5103739




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 381     cgcaggcgggcgatc 395
               |||||||||||||||
Sbjct: 5204360 cgcaggcgggcgatc 5204374




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 340     gcagggcatcggcgc 354
               |||||||||||||||
Sbjct: 5324332 gcagggcatcggcgc 5324346




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 121     cgacagccgcagcca 135
               |||||||||||||||
Sbjct: 5474429 cgacagccgcagcca 5474443




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 380     ccgcaggcgggcgat 394
               |||||||||||||||
Sbjct: 5742151 ccgcaggcgggcgat 5742165




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 153     gcgtgctgcaccgcg 167
               |||||||||||||||
Sbjct: 6031037 gcgtgctgcaccgcg 6031051




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 377     cacccgcaggcgggcgatc 395
               |||||||||||| ||||||
Sbjct: 6137964 cacccgcaggcgcgcgatc 6137946




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 474     tcgacagcctggccaccgg 492
               |||||||||||| ||||||
Sbjct: 6185393 tcgacagcctggtcaccgg 6185375




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 322     cctcgacctcggctg 336
               |||||||||||||||
Sbjct: 6246647 cctcgacctcggctg 6246633




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 582     ccggcgacagcggcg 596
               |||||||||||||||
Sbjct: 6253992 ccggcgacagcggcg 6253978




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 255     gcacgcggatcaccg 269
               |||||||||||||||
Sbjct: 6303122 gcacgcggatcaccg 6303136




 Score = 30.2 bits (15), Expect = 4.1
 Identities = 21/23 (91%)
 Strand = Plus / Plus

                                      
Query: 510     tgctgttcagcccgcagcgcatc 532
               ||||||||||| ||| |||||||
Sbjct: 6323631 tgctgttcagcgcgctgcgcatc 6323653




  Database: pa14
    Posted date:  Jan 15, 2004  3:01 PM
  Number of letters in database: 6,534,396
  Number of sequences in database:  1
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,209
Number of Sequences: 1
Number of extensions: 12209
Number of successful extensions: 134
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 132
length of query: 805
length of database: 6,534,396
effective HSP length: 16
effective length of query: 789
effective length of database: 6,534,380
effective search space: 5155625820
effective search space used: 5155625820
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)