BLAST Search Results

BLASTN 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: pa14 
           1 sequences; 6,534,396 total letters



Query= 
         (895 letters)

Distribution of 124 Blast Hits on the Query Sequence



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GCTS_68                                                           291   8e-79 

>GCTS_68 
          Length = 6534396

 Score =  291 bits (147), Expect = 8e-79
 Identities = 147/147 (100%)
 Strand = Plus / Plus

                                                                          
Query: 60     tagcccggcagcaggccgccgaggatcgccccgaccgagccgcagccgttgacgaagccg 119
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538949 tagcccggcagcaggccgccgaggatcgccccgaccgagccgcagccgttgacgaagccg 539008

                                                                          
Query: 120    gtggcggtgccggccgcctcgctggtgccgaagtcgatggcggcggcgccgctgatcatc 179
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539009 gtggcggtgccggccgcctcgctggtgccgaagtcgatggcggcggcgccgctgatcatc 539068

                                         
Query: 180    gagtccggcccgtagagggtgacgccc 206
              |||||||||||||||||||||||||||
Sbjct: 539069 gagtccggcccgtagagggtgacgccc 539095




 Score =  174 bits (88), Expect = 1e-43
 Identities = 127/140 (90%)
 Strand = Plus / Plus

                                                                           
Query: 60      tagcccggcagcaggccgccgaggatcgccccgaccgagccgcagccgttgacgaagccg 119
               ||||| ||||||||||| ||||||||||| || ||||| |||||||| ||||||||||||
Sbjct: 1020360 tagccgggcagcaggccaccgaggatcgcgcccaccgaaccgcagccattgacgaagccg 1020419

                                                                           
Query: 120     gtggcggtgccggccgcctcgctggtgccgaagtcgatggcggcggcgccgctgatcatc 179
               | |||||||||||| ||||||| ||||||||||||||||||||||| ||||| |||||||
Sbjct: 1020420 gaggcggtgccggcggcctcgccggtgccgaagtcgatggcggcggagccgcagatcatc 1020479

                                   
Query: 180     gagtccggcccgtagagggt 199
               |||||||| ||||| |||||
Sbjct: 1020480 gagtccgggccgtacagggt 1020499




 Score = 40.1 bits (20), Expect = 0.005
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 113     gaagccggtggcggtgccggccgc 136
               |||||||| |||||||||||||||
Sbjct: 5429970 gaagccggcggcggtgccggccgc 5429947




 Score = 38.2 bits (19), Expect = 0.019
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 62      gcccggcagcaggccgccg 80
               |||||||||||||||||||
Sbjct: 4408075 gcccggcagcaggccgccg 4408057




 Score = 36.2 bits (18), Expect = 0.074
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 68    cagcaggccgccgaggatcgcc 89
             |||||||||| |||||||||||
Sbjct: 12380 cagcaggccggcgaggatcgcc 12359




 Score = 36.2 bits (18), Expect = 0.074
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                         
Query: 118     cggtggcggtgccggccgcctcgctg 143
               ||||| ||||||||||||||| ||||
Sbjct: 1672525 cggtgtcggtgccggccgcctggctg 1672500




 Score = 36.2 bits (18), Expect = 0.074
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 78      ccgaggatcgccccgacc 95
               ||||||||||||||||||
Sbjct: 4501615 ccgaggatcgccccgacc 4501598




 Score = 36.2 bits (18), Expect = 0.074
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                     
Query: 71      caggccgccgaggatcgccccg 92
               |||||||||||| |||||||||
Sbjct: 5046029 caggccgccgagcatcgccccg 5046050




 Score = 36.2 bits (18), Expect = 0.074
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 67      gcagcaggccgccgagga 84
               ||||||||||||||||||
Sbjct: 6011169 gcagcaggccgccgagga 6011186




 Score = 34.2 bits (17), Expect = 0.29
 Identities = 20/21 (95%)
 Strand = Plus / Plus

                                   
Query: 62     gcccggcagcaggccgccgag 82
              |||| ||||||||||||||||
Sbjct: 464785 gcccagcagcaggccgccgag 464805




 Score = 34.2 bits (17), Expect = 0.29
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 67      gcagcaggccgccgagg 83
               |||||||||||||||||
Sbjct: 1386269 gcagcaggccgccgagg 1386285




 Score = 34.2 bits (17), Expect = 0.29
 Identities = 23/25 (92%)
 Strand = Plus / Plus

                                        
Query: 64      ccggcagcaggccgccgaggatcgc 88
               ||||||||||| ||||||| |||||
Sbjct: 2218162 ccggcagcaggtcgccgagcatcgc 2218186




 Score = 34.2 bits (17), Expect = 0.29
 Identities = 20/21 (95%)
 Strand = Plus / Plus

                                    
Query: 165     gcgccgctgatcatcgagtcc 185
               |||||| ||||||||||||||
Sbjct: 2374426 gcgccgatgatcatcgagtcc 2374446




 Score = 34.2 bits (17), Expect = 0.29
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 76      cgccgaggatcgccccg 92
               |||||||||||||||||
Sbjct: 2415170 cgccgaggatcgccccg 2415154




 Score = 34.2 bits (17), Expect = 0.29
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 65      cggcagcaggccgccga 81
               |||||||||||||||||
Sbjct: 3100097 cggcagcaggccgccga 3100081




 Score = 34.2 bits (17), Expect = 0.29
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 65      cggcagcaggccgccga 81
               |||||||||||||||||
Sbjct: 3206567 cggcagcaggccgccga 3206551




 Score = 34.2 bits (17), Expect = 0.29
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 139     cgctggtgccgaagtcg 155
               |||||||||||||||||
Sbjct: 3367646 cgctggtgccgaagtcg 3367630




 Score = 34.2 bits (17), Expect = 0.29
 Identities = 20/21 (95%)
 Strand = Plus / Minus

                                    
Query: 154     cgatggcggcggcgccgctga 174
               |||||||| ||||||||||||
Sbjct: 3887439 cgatggcgtcggcgccgctga 3887419




 Score = 34.2 bits (17), Expect = 0.29
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 70      gcaggccgccgaggatc 86
               |||||||||||||||||
Sbjct: 5349830 gcaggccgccgaggatc 5349814




 Score = 34.2 bits (17), Expect = 0.29
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 62      gcccggcagcaggccgc 78
               |||||||||||||||||
Sbjct: 5754649 gcccggcagcaggccgc 5754633




 Score = 34.2 bits (17), Expect = 0.29
 Identities = 23/25 (92%)
 Strand = Plus / Minus

                                        
Query: 64      ccggcagcaggccgccgaggatcgc 88
               |||||||||||| ||||||| ||||
Sbjct: 5944261 ccggcagcaggcggccgaggttcgc 5944237




 Score = 34.2 bits (17), Expect = 0.29
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 67      gcagcaggccgccgagg 83
               |||||||||||||||||
Sbjct: 6482449 gcagcaggccgccgagg 6482433




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                             
Query: 116   gccggtggcggtgccg 131
             ||||||||||||||||
Sbjct: 29031 gccggtggcggtgccg 29046




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                              
Query: 62     gcccggcagcaggccg 77
              ||||||||||||||||
Sbjct: 117212 gcccggcagcaggccg 117227




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                  
Query: 76     cgccgaggatcgccccgacc 95
              |||||||||||||| |||||
Sbjct: 253564 cgccgaggatcgccgcgacc 253583




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                              
Query: 62     gcccggcagcaggccg 77
              ||||||||||||||||
Sbjct: 704714 gcccggcagcaggccg 704699




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                  
Query: 157    tggcggcggcgccgctgatc 176
              |||||||||||| |||||||
Sbjct: 912850 tggcggcggcgctgctgatc 912869




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 158     ggcggcggcgccgctg 173
               ||||||||||||||||
Sbjct: 1825946 ggcggcggcgccgctg 1825931




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 69      agcaggccgccgagga 84
               ||||||||||||||||
Sbjct: 1832614 agcaggccgccgagga 1832599




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                   
Query: 85      tcgccccgaccgagccgcag 104
               |||||| |||||||||||||
Sbjct: 2211508 tcgccctgaccgagccgcag 2211489




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 22/24 (91%)
 Strand = Plus / Minus

                                       
Query: 149     gaagtcgatggcggcggcgccgct 172
               |||||||||  |||||||||||||
Sbjct: 2500336 gaagtcgataccggcggcgccgct 2500313




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 146     gccgaagtcgatggcg 161
               ||||||||||||||||
Sbjct: 3144584 gccgaagtcgatggcg 3144569




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 78      ccgaggatcgccccga 93
               ||||||||||||||||
Sbjct: 3921102 ccgaggatcgccccga 3921117




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 118     cggtggcggtgccggc 133
               ||||||||||||||||
Sbjct: 4090200 cggtggcggtgccggc 4090185




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 120     gtggcggtgccggccg 135
               ||||||||||||||||
Sbjct: 4291754 gtggcggtgccggccg 4291739




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 68      cagcaggccgccgagg 83
               ||||||||||||||||
Sbjct: 4470469 cagcaggccgccgagg 4470454




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 118     cggtggcggtgccggc 133
               ||||||||||||||||
Sbjct: 4985219 cggtggcggtgccggc 4985204




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 132     gccgcctcgctggtgc 147
               ||||||||||||||||
Sbjct: 4987714 gccgcctcgctggtgc 4987699




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 77      gccgaggatcgccccg 92
               ||||||||||||||||
Sbjct: 5045311 gccgaggatcgccccg 5045326




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 67      gcagcaggccgccgag 82
               ||||||||||||||||
Sbjct: 5196432 gcagcaggccgccgag 5196417




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 166     cgccgctgatcatcga 181
               ||||||||||||||||
Sbjct: 5522014 cgccgctgatcatcga 5522029




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 67      gcagcaggccgccgag 82
               ||||||||||||||||
Sbjct: 5743074 gcagcaggccgccgag 5743089




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 62      gcccggcagcaggccg 77
               ||||||||||||||||
Sbjct: 5813439 gcccggcagcaggccg 5813454




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 68      cagcaggccgccgagg 83
               ||||||||||||||||
Sbjct: 5846007 cagcaggccgccgagg 5845992




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 156     atggcggcggcgccgc 171
               ||||||||||||||||
Sbjct: 6081635 atggcggcggcgccgc 6081650




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 77      gccgaggatcgccccg 92
               ||||||||||||||||
Sbjct: 6168740 gccgaggatcgccccg 6168755




 Score = 32.2 bits (16), Expect = 1.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 131     ggccgcctcgctggtg 146
               ||||||||||||||||
Sbjct: 6317026 ggccgcctcgctggtg 6317041




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 803    aggcagcgcttgagc 817
              |||||||||||||||
Sbjct: 341457 aggcagcgcttgagc 341471




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 153    tcgatggcggcggcg 167
              |||||||||||||||
Sbjct: 344414 tcgatggcggcggcg 344428




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 112    cgaagccggtggcgg 126
              |||||||||||||||
Sbjct: 500921 cgaagccggtggcgg 500935




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 120    gtggcggtgccggcc 134
              |||||||||||||||
Sbjct: 671956 gtggcggtgccggcc 671970




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 174    atcatcgagtccggc 188
              |||||||||||||||
Sbjct: 688384 atcatcgagtccggc 688370




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 68     cagcaggccgccgag 82
              |||||||||||||||
Sbjct: 745655 cagcaggccgccgag 745641




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                 
Query: 107    gttgacgaagccggtggcg 125
              ||||||||||||| |||||
Sbjct: 840456 gttgacgaagccgctggcg 840474




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 121     tggcggtgccggccg 135
               |||||||||||||||
Sbjct: 1032510 tggcggtgccggccg 1032524




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 64      ccggcagcaggccgc 78
               |||||||||||||||
Sbjct: 1064464 ccggcagcaggccgc 1064450




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 157     tggcggcggcgccgc 171
               |||||||||||||||
Sbjct: 1149547 tggcggcggcgccgc 1149533




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 74      gccgccgaggatcgc 88
               |||||||||||||||
Sbjct: 1156923 gccgccgaggatcgc 1156937




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 74      gccgccgaggatcgc 88
               |||||||||||||||
Sbjct: 1388756 gccgccgaggatcgc 1388770




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 70      gcaggccgccgagga 84
               |||||||||||||||
Sbjct: 1718258 gcaggccgccgagga 1718244




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 166     cgccgctgatcatcg 180
               |||||||||||||||
Sbjct: 2005047 cgccgctgatcatcg 2005033




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 121     tggcggtgccggccg 135
               |||||||||||||||
Sbjct: 2032099 tggcggtgccggccg 2032085




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 67      gcagcaggccgccga 81
               |||||||||||||||
Sbjct: 2041133 gcagcaggccgccga 2041147




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 111     acgaagccggtggcg 125
               |||||||||||||||
Sbjct: 2176265 acgaagccggtggcg 2176279




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 111     acgaagccggtggcg 125
               |||||||||||||||
Sbjct: 2179399 acgaagccggtggcg 2179413




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 81      aggatcgccccgacc 95
               |||||||||||||||
Sbjct: 2264213 aggatcgccccgacc 2264199




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 76      cgccgaggatcgccc 90
               |||||||||||||||
Sbjct: 2417578 cgccgaggatcgccc 2417592




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 68      cagcaggccgccgag 82
               |||||||||||||||
Sbjct: 2436510 cagcaggccgccgag 2436496




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 135     gcctcgctggtgccg 149
               |||||||||||||||
Sbjct: 2507581 gcctcgctggtgccg 2507595




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 182     gtccggcccgtagag 196
               |||||||||||||||
Sbjct: 2551688 gtccggcccgtagag 2551674




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 152     gtcgatggcggcggc 166
               |||||||||||||||
Sbjct: 2600464 gtcgatggcggcggc 2600450




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 117     ccggtggcggtgccg 131
               |||||||||||||||
Sbjct: 2624152 ccggtggcggtgccg 2624166




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 149     gaagtcgatggcggcggcg 167
               |||| ||||||||||||||
Sbjct: 2624982 gaagacgatggcggcggcg 2624964




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 69      agcaggccgccgagg 83
               |||||||||||||||
Sbjct: 2817473 agcaggccgccgagg 2817487




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 560     tgtttttgggaattt 574
               |||||||||||||||
Sbjct: 2914601 tgtttttgggaattt 2914587




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 114     aagccggtggcggtgccgg 132
               |||||||||||| ||||||
Sbjct: 2949477 aagccggtggcgctgccgg 2949459




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 162     gcggcgccgctgatc 176
               |||||||||||||||
Sbjct: 3010329 gcggcgccgctgatc 3010343




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 119     ggtggcggtgccggc 133
               |||||||||||||||
Sbjct: 3110500 ggtggcggtgccggc 3110514




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 124     cggtgccggccgcct 138
               |||||||||||||||
Sbjct: 3143596 cggtgccggccgcct 3143582




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 104     gccgttgacgaagccggtg 122
               ||||| |||||||||||||
Sbjct: 3149744 gccgtagacgaagccggtg 3149726




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 70      gcaggccgccgagga 84
               |||||||||||||||
Sbjct: 3325169 gcaggccgccgagga 3325155




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 168     ccgctgatcatcgag 182
               |||||||||||||||
Sbjct: 3620975 ccgctgatcatcgag 3620961




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 84      atcgccccgaccgag 98
               |||||||||||||||
Sbjct: 3639648 atcgccccgaccgag 3639634




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 154     cgatggcggcggcgc 168
               |||||||||||||||
Sbjct: 3643877 cgatggcggcggcgc 3643891




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 117     ccggtggcggtgccg 131
               |||||||||||||||
Sbjct: 4037773 ccggtggcggtgccg 4037759




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 67      gcagcaggccgccga 81
               |||||||||||||||
Sbjct: 4047712 gcagcaggccgccga 4047698




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 108     ttgacgaagccggtg 122
               |||||||||||||||
Sbjct: 4063196 ttgacgaagccggtg 4063182




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 68      cagcaggccgccgag 82
               |||||||||||||||
Sbjct: 4074561 cagcaggccgccgag 4074575




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 61      agcccggcagcaggc 75
               |||||||||||||||
Sbjct: 4075578 agcccggcagcaggc 4075592




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 21/23 (91%)
 Strand = Plus / Minus

                                      
Query: 154     cgatggcggcggcgccgctgatc 176
               |||||||||||||| || |||||
Sbjct: 4243437 cgatggcggcggcggcggtgatc 4243415




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 119     ggtggcggtgccggc 133
               |||||||||||||||
Sbjct: 4255863 ggtggcggtgccggc 4255849




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 116     gccggtggcggtgcc 130
               |||||||||||||||
Sbjct: 4286549 gccggtggcggtgcc 4286535




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 131     ggccgcctcgctggt 145
               |||||||||||||||
Sbjct: 4485340 ggccgcctcgctggt 4485354




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 172     tgatcatcgagtccg 186
               |||||||||||||||
Sbjct: 4519694 tgatcatcgagtccg 4519708




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 158     ggcggcggcgccgct 172
               |||||||||||||||
Sbjct: 4687096 ggcggcggcgccgct 4687110




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 63      cccggcagcaggccg 77
               |||||||||||||||
Sbjct: 4693268 cccggcagcaggccg 4693254




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 69      agcaggccgccgagg 83
               |||||||||||||||
Sbjct: 4719208 agcaggccgccgagg 4719194




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 159     gcggcggcgccgctgatca 177
               |||||||||||| ||||||
Sbjct: 5175611 gcggcggcgccgttgatca 5175593




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 71      caggccgccgaggatcgcc 89
               |||||||||||||| ||||
Sbjct: 5196071 caggccgccgaggaccgcc 5196053




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 67      gcagcaggccgccga 81
               |||||||||||||||
Sbjct: 5202618 gcagcaggccgccga 5202604




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 77      gccgaggatcgccccgacc 95
               ||||||||||||| |||||
Sbjct: 5287591 gccgaggatcgcctcgacc 5287609




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 74      gccgccgaggatcgccccg 92
               |||||||||||||| ||||
Sbjct: 5344700 gccgccgaggatcggcccg 5344682




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 153     tcgatggcggcggcg 167
               |||||||||||||||
Sbjct: 5386955 tcgatggcggcggcg 5386941




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 71      caggccgccgaggat 85
               |||||||||||||||
Sbjct: 5411582 caggccgccgaggat 5411596




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 67      gcagcaggccgccga 81
               |||||||||||||||
Sbjct: 5563804 gcagcaggccgccga 5563790




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 114     aagccggtggcggtg 128
               |||||||||||||||
Sbjct: 5564995 aagccggtggcggtg 5565009




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 153     tcgatggcggcggcg 167
               |||||||||||||||
Sbjct: 5635246 tcgatggcggcggcg 5635232




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 144     gtgccgaagtcgatg 158
               |||||||||||||||
Sbjct: 5732579 gtgccgaagtcgatg 5732593




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 21/23 (91%)
 Strand = Plus / Minus

                                      
Query: 128     gccggccgcctcgctggtgccga 150
               ||||| ||||| |||||||||||
Sbjct: 5746884 gccggacgccttgctggtgccga 5746862




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 149     gaagtcgatggcggc 163
               |||||||||||||||
Sbjct: 5798163 gaagtcgatggcggc 5798177




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 69      agcaggccgccgagg 83
               |||||||||||||||
Sbjct: 5828799 agcaggccgccgagg 5828813




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 69      agcaggccgccgagg 83
               |||||||||||||||
Sbjct: 5878292 agcaggccgccgagg 5878306




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 63      cccggcagcaggccg 77
               |||||||||||||||
Sbjct: 5897395 cccggcagcaggccg 5897409




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 155     gatggcggcggcgcc 169
               |||||||||||||||
Sbjct: 5906224 gatggcggcggcgcc 5906238




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 106     cgttgacgaagccgg 120
               |||||||||||||||
Sbjct: 5927256 cgttgacgaagccgg 5927242




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 140     gctggtgccgaagtcgatg 158
               |||||||||||||| ||||
Sbjct: 5928473 gctggtgccgaagtggatg 5928455




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 618     gtgatccatgcgttc 632
               |||||||||||||||
Sbjct: 5976637 gtgatccatgcgttc 5976651




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                                  
Query: 71      caggccgccgaggatcgcc 89
               ||||||| |||||||||||
Sbjct: 6002769 caggccgtcgaggatcgcc 6002787




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 154     cgatggcggcggcgc 168
               |||||||||||||||
Sbjct: 6119214 cgatggcggcggcgc 6119228




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 158     ggcggcggcgccgctgatc 176
               ||||||||||| |||||||
Sbjct: 6128492 ggcggcggcgctgctgatc 6128474




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 114     aagccggtggcggtg 128
               |||||||||||||||
Sbjct: 6215219 aagccggtggcggtg 6215205




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 24/27 (88%)
 Strand = Plus / Plus

                                          
Query: 118     cggtggcggtgccggccgcctcgctgg 144
               |||||||||||| || || ||||||||
Sbjct: 6277020 cggtggcggtgcaggtcgactcgctgg 6277046




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 809     cgcttgagctgtgat 823
               |||||||||||||||
Sbjct: 6442840 cgcttgagctgtgat 6442854




 Score = 30.2 bits (15), Expect = 4.6
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 68      cagcaggccgccgag 82
               |||||||||||||||
Sbjct: 6472590 cagcaggccgccgag 6472576




  Database: pa14
    Posted date:  Jan 15, 2004  3:01 PM
  Number of letters in database: 6,534,396
  Number of sequences in database:  1
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6190
Number of Sequences: 1
Number of extensions: 6190
Number of successful extensions: 124
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 124
length of query: 895
length of database: 6,534,396
effective HSP length: 16
effective length of query: 879
effective length of database: 6,534,380
effective search space: 5743720020
effective search space used: 5743720020
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)