BLASTN 2.2.26 [Sep-21-2011]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Database: pa14 
           1 sequences; 6,534,396 total letters



Query= 
         (172 letters)

Distribution of 64 Blast Hits on the Query Sequence 



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GCTS_68                                                           153   8e-38 



>GCTS_68 
          Length = 6534396

 Score =  153 bits (77), Expect = 8e-38
 Identities = 77/77 (100%)
 Strand = Plus / Plus

                                                                           
Query: 60      tacatcagccgcggtgtctacgtgatcaccgacgagcgccagcaacgcctggtcaaggtg 119
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6183368 tacatcagccgcggtgtctacgtgatcaccgacgagcgccagcaacgcctggtcaaggtg 6183427

                                
Query: 120     cgcctggaggacgatac 136
               |||||||||||||||||
Sbjct: 6183428 cgcctggaggacgatac 6183444






 Score = 38.2 bits (19), Expect = 0.003
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 98      ccagcaacgcctggtcaag 116
               |||||||||||||||||||
Sbjct: 5668056 ccagcaacgcctggtcaag 5668074






 Score = 34.2 bits (17), Expect = 0.052
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 98      ccagcaacgcctggtca 114
               |||||||||||||||||
Sbjct: 2445811 ccagcaacgcctggtca 2445827






 Score = 34.2 bits (17), Expect = 0.052
 Identities = 20/21 (95%)
 Strand = Plus / Plus

                                    
Query: 83      gatcaccgacgagcgccagca 103
               |||||||||||||||| ||||
Sbjct: 5337449 gatcaccgacgagcgcaagca 5337469






 Score = 32.2 bits (16), Expect = 0.21
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 101     gcaacgcctggtcaag 116
               ||||||||||||||||
Sbjct: 1457276 gcaacgcctggtcaag 1457261






 Score = 32.2 bits (16), Expect = 0.21
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                               
Query: 118     tgcgcctggaggacga 133
               ||||||||||||||||
Sbjct: 1501400 tgcgcctggaggacga 1501385






 Score = 32.2 bits (16), Expect = 0.21
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 94      agcgccagcaacgcct 109
               ||||||||||||||||
Sbjct: 1851812 agcgccagcaacgcct 1851827






 Score = 32.2 bits (16), Expect = 0.21
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 94      agcgccagcaacgcct 109
               ||||||||||||||||
Sbjct: 1993745 agcgccagcaacgcct 1993760






 Score = 32.2 bits (16), Expect = 0.21
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 95      gcgccagcaacgcctg 110
               ||||||||||||||||
Sbjct: 2473028 gcgccagcaacgcctg 2473043






 Score = 32.2 bits (16), Expect = 0.21
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                               
Query: 97      gccagcaacgcctggt 112
               ||||||||||||||||
Sbjct: 3054695 gccagcaacgcctggt 3054710






 Score = 32.2 bits (16), Expect = 0.21
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                   
Query: 94      agcgccagcaacgcctggtc 113
               ||||||||||||||| ||||
Sbjct: 3807388 agcgccagcaacgccgggtc 3807407






 Score = 30.2 bits (15), Expect = 0.82
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 84     atcaccgacgagcgc 98
              |||||||||||||||
Sbjct: 274758 atcaccgacgagcgc 274772






 Score = 30.2 bits (15), Expect = 0.82
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                             
Query: 113    caaggtgcgcctgga 127
              |||||||||||||||
Sbjct: 498651 caaggtgcgcctgga 498665






 Score = 30.2 bits (15), Expect = 0.82
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 95     gcgccagcaacgcct 109
              |||||||||||||||
Sbjct: 576915 gcgccagcaacgcct 576901






 Score = 30.2 bits (15), Expect = 0.82
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                             
Query: 81     gtgatcaccgacgag 95
              |||||||||||||||
Sbjct: 821903 gtgatcaccgacgag 821889






 Score = 30.2 bits (15), Expect = 0.82
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 88      ccgacgagcgccagc 102
               |||||||||||||||
Sbjct: 1108531 ccgacgagcgccagc 1108517






 Score = 30.2 bits (15), Expect = 0.82
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 99      cagcaacgcctggtc 113
               |||||||||||||||
Sbjct: 1166806 cagcaacgcctggtc 1166792






 Score = 30.2 bits (15), Expect = 0.82
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 118     tgcgcctggaggacg 132
               |||||||||||||||
Sbjct: 1833840 tgcgcctggaggacg 1833854






 Score = 30.2 bits (15), Expect = 0.82
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 83      gatcaccgacgagcg 97
               |||||||||||||||
Sbjct: 2119183 gatcaccgacgagcg 2119197






 Score = 30.2 bits (15), Expect = 0.82
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 101     gcaacgcctggtcaa 115
               |||||||||||||||
Sbjct: 2451551 gcaacgcctggtcaa 2451565






 Score = 30.2 bits (15), Expect = 0.82
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                              
Query: 118     tgcgcctggaggacg 132
               |||||||||||||||
Sbjct: 2895154 tgcgcctggaggacg 2895168






 Score = 30.2 bits (15), Expect = 0.82
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 85      tcaccgacgagcgcc 99
               |||||||||||||||
Sbjct: 3809026 tcaccgacgagcgcc 3809012






 Score = 30.2 bits (15), Expect = 0.82
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 116     ggtgcgcctggagga 130
               |||||||||||||||
Sbjct: 5273559 ggtgcgcctggagga 5273545






 Score = 30.2 bits (15), Expect = 0.82
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 113     caaggtgcgcctgga 127
               |||||||||||||||
Sbjct: 5384243 caaggtgcgcctgga 5384229






 Score = 30.2 bits (15), Expect = 0.82
 Identities = 18/19 (94%)
 Strand = Plus / Minus

                                  
Query: 93      gagcgccagcaacgcctgg 111
               |||||||||||| ||||||
Sbjct: 6273949 gagcgccagcaaggcctgg 6273931






 Score = 30.2 bits (15), Expect = 0.82
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                              
Query: 94      agcgccagcaacgcc 108
               |||||||||||||||
Sbjct: 6393027 agcgccagcaacgcc 6393013






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 17/18 (94%)
 Strand = Plus / Plus

                               
Query: 89    cgacgagcgccagcaacg 106
             ||||||||||| ||||||
Sbjct: 15443 cgacgagcgccggcaacg 15460






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                           
Query: 80    cgtgatcaccgacg 93
             ||||||||||||||
Sbjct: 35837 cgtgatcaccgacg 35824






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 89     cgacgagcgccagc 102
              ||||||||||||||
Sbjct: 647907 cgacgagcgccagc 647920






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                            
Query: 112    tcaaggtgcgcctg 125
              ||||||||||||||
Sbjct: 660637 tcaaggtgcgcctg 660624






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                            
Query: 113    caaggtgcgcctgg 126
              ||||||||||||||
Sbjct: 702790 caaggtgcgcctgg 702803






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 116     ggtgcgcctggagg 129
               ||||||||||||||
Sbjct: 1135171 ggtgcgcctggagg 1135158






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                 
Query: 97      gccagcaacgcctggtca 114
               |||||| |||||||||||
Sbjct: 1187485 gccagctacgcctggtca 1187468






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 80      cgtgatcaccgacg 93
               ||||||||||||||
Sbjct: 1358533 cgtgatcaccgacg 1358546






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 32/38 (84%)
 Strand = Plus / Plus

                                                     
Query: 75      gtctacgtgatcaccgacgagcgccagcaacgcctggt 112
               ||||||||| || |||| ||||| |  |||||||||||
Sbjct: 1527083 gtctacgtggtcgccgaggagcgtcgccaacgcctggt 1527120






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 92      cgagcgccagcaac 105
               ||||||||||||||
Sbjct: 1810337 cgagcgccagcaac 1810350






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 119     gcgcctggaggacg 132
               ||||||||||||||
Sbjct: 1845109 gcgcctggaggacg 1845096






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 112     tcaaggtgcgcctg 125
               ||||||||||||||
Sbjct: 2204677 tcaaggtgcgcctg 2204690






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 94      agcgccagcaacgc 107
               ||||||||||||||
Sbjct: 2308857 agcgccagcaacgc 2308844






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 88      ccgacgagcgccag 101
               ||||||||||||||
Sbjct: 2619079 ccgacgagcgccag 2619066






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 115     aggtgcgcctggag 128
               ||||||||||||||
Sbjct: 2661487 aggtgcgcctggag 2661474






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 107     cctggtcaaggtgc 120
               ||||||||||||||
Sbjct: 3041535 cctggtcaaggtgc 3041548






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 116     ggtgcgcctggagg 129
               ||||||||||||||
Sbjct: 3208078 ggtgcgcctggagg 3208091






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 95      gcgccagcaacgcc 108
               ||||||||||||||
Sbjct: 3339248 gcgccagcaacgcc 3339261






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 89      cgacgagcgccagc 102
               ||||||||||||||
Sbjct: 3572747 cgacgagcgccagc 3572734






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 119     gcgcctggaggacg 132
               ||||||||||||||
Sbjct: 3573884 gcgcctggaggacg 3573871






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 113     caaggtgcgcctgg 126
               ||||||||||||||
Sbjct: 3664345 caaggtgcgcctgg 3664358






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 98      ccagcaacgcctgg 111
               ||||||||||||||
Sbjct: 3689146 ccagcaacgcctgg 3689159






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 119     gcgcctggaggacg 132
               ||||||||||||||
Sbjct: 3822348 gcgcctggaggacg 3822361






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 98      ccagcaacgcctgg 111
               ||||||||||||||
Sbjct: 3844653 ccagcaacgcctgg 3844666






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 76      tctacgtgatcacc 89
               ||||||||||||||
Sbjct: 3909012 tctacgtgatcacc 3908999






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 97      gccagcaacgcctg 110
               ||||||||||||||
Sbjct: 4059435 gccagcaacgcctg 4059448






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 121     gcctggaggacgat 134
               ||||||||||||||
Sbjct: 4061619 gcctggaggacgat 4061606






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 98      ccagcaacgcctgg 111
               ||||||||||||||
Sbjct: 4176514 ccagcaacgcctgg 4176527






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 76      tctacgtgatcacc 89
               ||||||||||||||
Sbjct: 4406133 tctacgtgatcacc 4406146






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 113     caaggtgcgcctgg 126
               ||||||||||||||
Sbjct: 4545396 caaggtgcgcctgg 4545409






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 20/22 (90%)
 Strand = Plus / Minus

                                     
Query: 105     cgcctggtcaaggtgcgcctgg 126
               ||||||| | ||||||||||||
Sbjct: 4812978 cgcctggcccaggtgcgcctgg 4812957






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 20/22 (90%)
 Strand = Plus / Plus

                                     
Query: 90      gacgagcgccagcaacgcctgg 111
               ||||||||||||| || |||||
Sbjct: 4899096 gacgagcgccagccacccctgg 4899117






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 96      cgccagcaacgcct 109
               ||||||||||||||
Sbjct: 4930076 cgccagcaacgcct 4930089






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 94      agcgccagcaacgc 107
               ||||||||||||||
Sbjct: 5457043 agcgccagcaacgc 5457056






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                                 
Query: 82      tgatcaccgacgagcgcc 99
               |||| |||||||||||||
Sbjct: 5781995 tgattaccgacgagcgcc 5781978






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                             
Query: 114     aaggtgcgcctgga 127
               ||||||||||||||
Sbjct: 5980213 aaggtgcgcctgga 5980226






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                             
Query: 92      cgagcgccagcaac 105
               ||||||||||||||
Sbjct: 5991435 cgagcgccagcaac 5991422






 Score = 28.2 bits (14), Expect = 3.2
 Identities = 17/18 (94%)
 Strand = Plus / Plus

                                 
Query: 115     aggtgcgcctggaggacg 132
               ||||||||||| ||||||
Sbjct: 6290059 aggtgcgcctgaaggacg 6290076






  Database: pa14
    Posted date:  Jan 15, 2004  3:01 PM
  Number of letters in database: 6,534,396
  Number of sequences in database:  1
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1760
Number of Sequences: 1
Number of extensions: 1760
Number of successful extensions: 64
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of query: 172
length of database: 6,534,396
effective HSP length: 15
effective length of query: 157
effective length of database: 6,534,381
effective search space: 1025897817
effective search space used: 1025897817
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)